Orrella dioscoreae: ODI_R4088
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Entry
ODI_R4088 CDS
T05133
Name
(GenBank) Channel-forming transporter/cytolysins activator of TpsB family
KO
K07326
hemolysin activation/secretion protein
Organism
odi
Orrella dioscoreae
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ShlB
POTRA_2
POTRA_3
DUF4637
Motif
Other DBs
NCBI-ProteinID:
SOE52337
UniProt:
A0A1C3K5H8
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Position
I:complement(4487624..4489342)
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AA seq
572 aa
AA seq
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MGEVAVLQRKTRRTWRLFPLILLVSLAAPALRAQTAPADPGLDIQRRQEQELEAQRARAA
ERPDVFSAPAQAPAEGVLTLPQESPCFVITDIRWEGQAPPAWATSEADAVLSRCVGALGL
QALQQHLMAMMIARGKVTARVLVPEQSLAQGVLTLRYVRGRIAAVRADGAPGWWRMALPA
WEDGDVDQRDLDQALENVRRLGGQSDAAIDLVPGAQPGDTDIVLKPGTGKRLHGYAGLDN
GGMSSTGDWQMNAGLTVDSPLFLYDQLSASWNSNADRGNSAAGSRAASLHYSIPFGYWTA
FAGASRSRYRQTVPGFDAPIVYGGTSKQVEAGLSVVPYRGTDHKGNLSAKLYRKRATSTL
DDIEIEVQRRDVVGLELGYSHRQYLGQAVLDAGVSWRASIPRWSDAPGFVLGEENWNGRS
RVLLGSAGVFLPFALAGQRWGYQANWQIQHADTAILPADYFTIGNRYAVRGFDGEMTLAG
ERGWTLRNDLSMNLGDTGHQLYGGVDAGRVGGQAAAYLPSRTLIGAVLGLRGRAAVGPVN
ANYDLSLGWPLKKPDLLETASTTVAFSLTFDF
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgaagtggcggtattgcaacggaaaactcgtagaacctggcgtcttttccccctc
attctgctcgtcagccttgctgcgccggcactccgcgcccaaacggcgccggccgatcct
ggcctggacatccagcgccgccaggaacaggaactggaagcccagcgcgcccgcgccgct
gaacggcccgatgtcttctccgctcccgcccaggcgccagccgagggcgtcctgacgctt
ccccaggaaagtccctgcttcgtcatcactgacatccgttgggaaggccaggcaccgccc
gcctgggcgacaagcgaggctgatgccgtgctgtcgcgctgcgtcggcgcgctcgggttg
caggccctccagcagcacctcatggccatgatgatcgcgcgcggcaaggtcaccgcccgc
gtgctggtgcccgagcaatccctggcccagggcgtgctgacgctgcgctatgtgcgcggc
cgcatcgcggcggtgcgcgccgatggcgcgccgggctggtggcgcatggcgctgcccgcg
tgggaagacggcgacgtggaccagcgcgacctcgaccaggccctggaaaacgtgcgccgc
ctgggcgggcagtccgatgccgccatcgacctcgtgcccggcgcgcagcccggcgacacc
gacatcgtcctgaaaccgggcaccggcaagcgcctgcatggctacgcgggcctggacaac
ggcggcatgtcctccaccggtgactggcagatgaacgccggcctgacggtggattcgccg
ctgttcctgtacgaccagctctcggcctcgtggaacagcaatgccgaccgtggcaattcg
gcggcgggttcgcgcgccgcgtcgctgcactacagcattcccttcggctactggacggcc
ttcgcgggcgccagccgttcacgctatcgccagaccgtgccgggcttcgacgcgcccatc
gtctatggcggcaccagcaagcaggtcgaggccgggctgtcggtggtgccgtatcgcggc
accgaccacaagggcaacctcagcgcgaagctgtatcgcaagcgcgccaccagcacgctg
gacgacatcgagatcgaggtgcaacggcgagacgtcgtgggcctggagctgggctattcc
catcgccaatacctggggcaggccgtgctggatgccggcgtgtcgtggcgcgcctccatt
ccgcgctggtccgacgcgccgggcttcgtcctgggcgaagagaactggaacggccgcagc
cgcgtgctgctgggcagcgcgggcgtcttcctgcccttcgcgctggcgggccagcgctgg
ggctaccaggccaactggcagatccagcatgccgacacggcaatcctgcccgcggactac
ttcaccatcggcaaccgctatgccgtgcgcggcttcgatggcgagatgaccctggccggc
gagcgcggctggacgctgcgcaacgacctctccatgaacctgggcgacaccggccatcag
ctgtacggcggcgtcgacgcgggccgcgtgggcggccaggcggcggcctatctgcccagc
cgcaccttgatcggcgcggtgctgggcctgcgcggacgcgccgcagtggggccggtgaac
gccaactacgacctgtcgctgggctggcccctgaagaaacccgacctgctcgaaaccgcc
agcaccacggtggcgttctcgttgacctttgatttctga
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