Orrella dioscoreae: ODI_R4106
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Entry
ODI_R4106 CDS
T05133
Name
(GenBank) diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Organism
odi
Orrella dioscoreae
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Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
HAMP
PAS_8
PAS
PAS_4
PAS_3
HAMP_PhoQ
DUF2130
Motif
Other DBs
NCBI-ProteinID:
SOE52354
UniProt:
A0A1C3K5G7
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All DBs
Position
I:4505822..4509013
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AA seq
1063 aa
AA seq
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MKRNVFFRLLARLRVGRKLLLIYLLDLTAVVYISGILIHEKTLSIDFSDKEILGSAYITA
VRDTLVDVALAGAGQPATPDALGKAHTALATAETQYGANMQSAELNARLRAQLERLSLSP
APNYDALAEALDACRALITRVGNQSNLILDPDLDSYYAMSLSILRYPALLHAVNSIGHLL
NDTNPALQSDEAVRVRYLLLEGQLDAVLQGLRSDYAEAGAVNRQLGAALTPSIQHLLATV
DTYRRTVHDVLNHEAGVRNEAALRAAGAAQQAVVHAADAAWIVTADRLDELLYTRVSGLY
SRMWLHLGTALFLLISILFMVYFVAQQISWPLRQLARVMDTVRRTGDHTQRASWNSQDEI
GQLVRGFNDMLEQLDRERDAQKELAATARASAAQHSLVEATPVPMMVTSVPGHEVLHANQ
PALSWLGGRTTDPWMHGLDSSVRARFFQQLSDHDAVDEFEVLWRAGAEPTWAMLSARRLH
FQGRDAILTAFTPINQIKLMEQRLELWAKVFEASSEAILILDHERKLLSANASFYRSTGF
STADVLGKVPGFIAAESRNGSVMENLVAYVEPSSTWSGEAQIRRRQGGDYPAWLMISAVR
DKQADVSHYICTVIDITDRKKSEARIRFLAEHDVLTQLPNRALFTKQLAASLESGERTGR
RCAVLFIDLDRFKDINDSLGHHVGDGLLKSISRRLLQAVRSGDTVSRLGGDEFTIILNGV
TNQADVEHLIGERLIPLVREPHEIGGVTLQVSCSVGVAMYPDDGLDIDTLMQNADAAMYQ
AKAAGRNLVKFFSAEMAERARLRLAMEAGLRTCVAQRELALAFQPCVDAAHGAIVGVEGL
LRWTSPTLGAIPPGQFIPIAEDTRLIIPIGAWVIDEACRQMAAWRDQGLPALRTSINLSA
IQLRDPGLIDTLRACLNAHGIAPELLELEITETVLMSNAENYLDVIRDIRKLGVKLSLDD
FGTGYSSLSYLNRFPLDRLKIDQAFVRGMLDSATDLAVVKAIIELGHELGLRVVAEGVER
EEEAQALCSIGCDELQGYLFGRPMPGAQLPQWCEDAGRLAAET
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcaatgtctttttccggctgctcgcgcggctgagggtcggccgcaagctgctg
ctgatctatctgcttgacctcaccgccgtcgtctacatcagcggcatcctcatccacgaa
aaaaccctgtccatcgatttctccgacaaggagatcctgggcagcgcctacatcactgcc
gtgcgcgacacgctggtcgacgtcgcgctggccggtgccgggcaacccgccacgcccgac
gccctgggcaaggcccacacggcgctggccactgccgaaacccagtacggcgccaacatg
caaagcgccgaattgaacgcgcgcctgcgcgcacagctggaacggctgtcgctctcgcct
gcccccaactacgacgcgctggccgaagccctggatgcctgccgggcgctgatcacacgc
gtgggcaaccagtccaacctgatcctggatccggacctggacagctactacgccatgtcg
ctgtccatcctgcgctaccccgcgttgctgcacgcggtcaacagcatcggccacctgctg
aacgacaccaatcccgccttgcaatcggacgaagccgtgcgggtccgctatctgctgctg
gaaggccagctggatgcggtcctgcagggcctgcgctcggactacgccgaagccggcgcg
gtcaatcgccagctgggcgctgcgctgacgccctccatccagcacctgctcgccacggtc
gatacctatcgccgcacggtgcatgacgtgctgaaccacgaagcgggcgtgcgcaacgaa
gcggcactgcgggcggcgggcgccgcgcagcaggccgtggtccatgccgcggatgcggca
tggatcgtcacggccgaccggctggacgaactgctctacacccgcgtcagcggtttgtac
tcaaggatgtggctgcatctgggcaccgccctgttcctgctgatcagcattctcttcatg
gtgtatttcgtcgcccagcagatctcctggccgttgcggcaactggcgcgtgtcatggac
acggtgcgccgaaccggcgaccacacgcaacgggcgtcgtggaacagccaggacgagatc
ggccagctggtgcgcggtttcaacgacatgctggagcagctggaccgcgaacgcgacgcc
cagaaggaactggccgccacggcccgcgcgtcggccgcgcagcattcgctggtggaagcc
acgcccgtgcccatgatggtgacctcggtgcctggccatgaagtgctgcacgccaaccag
cccgccttgtcgtggctgggcggacgcacgacggacccgtggatgcacgggctggactca
tcggtgcgcgcacggttcttccagcaactgtccgaccacgatgccgtcgatgaattcgag
gtgctgtggcgcgccggcgccgaacccacctgggccatgctgtccgcgcggcgcctgcat
ttccagggacgcgatgcgatcctgacggcgttcacgcccatcaaccagatcaagctgatg
gagcaacggctggaactctgggccaaggtcttcgaggcctcgtccgaggccatcctgatc
ctcgaccacgagcgcaagctgctgagcgccaacgcgtccttctaccggtccacgggtttc
agcaccgcggacgtgctgggcaaggtgccgggcttcatcgccgcggagtcgcgcaatggc
tccgtcatggaaaacctcgtcgcgtatgtcgagccttccagcacgtggagcggcgaggcc
cagatccgccggcgccagggcggcgactatccggcctggctgatgatcagcgccgtgcgc
gacaagcaggccgacgtgtcgcactacatctgcaccgtcatcgacatcaccgaccgcaag
aagagcgaggcgcgcatccgcttcctggccgagcacgacgtgctgacgcaactgcccaac
cgggcgctgttcaccaaacagctggccgcgtcgctggaaagcggcgagcggacaggccgg
cgctgcgccgtgctgttcatcgacctggatcgcttcaaggacatcaacgactccctcggc
caccatgtcggcgacggcttgctgaagtccatctcgcgccggctgctgcaggccgtgcgc
agcggcgacaccgtcagccggctgggtggcgacgagttcaccatcatcctcaatggtgtc
accaaccaggccgacgtcgagcacctgatcggcgagcgcctgatcccgctcgtgcgggag
ccgcacgagatcggcggcgtcacgctgcaggtctcgtgcagcgtcggcgtggcgatgtat
ccggacgatggcctggacatcgatacgctgatgcagaacgccgatgccgccatgtaccag
gccaaggcggcgggccgcaatctcgtgaagttcttctcggccgagatggccgagcgcgcc
cggctgcggctggcgatggaggccggcctcaggacctgcgtggcccagcgcgaactggca
ctggcattccagccctgcgtcgatgccgcccacggcgcaatcgtcggcgtggagggcctg
ctgcgctggacctcgcccacgctgggcgccatcccgccaggccagttcatccccatcgcg
gaagatacccgcctcatcattcccatcggcgcctgggtcatcgacgaggcctgccggcag
atggccgcgtggcgcgaccagggcttgcctgccctgcgcacctcgatcaacctttccgcc
atccagctgcgcgacccgggcctcatcgacacgttgcgcgcctgcctgaacgcgcatggc
atcgcgcccgagctgctggagctggagatcaccgagaccgtgctgatgagcaatgcggag
aattacctggacgtgatccgggacatccgcaagctgggcgtgaagctgtcgctggacgac
ttcggcacggggtattccagcctgagctacctgaaccgcttcccgcttgaccgcctgaag
atcgaccaggcgttcgtgcgcggcatgctggattccgccaccgacctggccgtggtgaag
gccatcatcgaactgggccacgagctgggcctgcgcgtggtggccgaaggcgtcgaacgc
gaggaagaggcgcaggcgctgtgcagcatcggctgcgacgaactgcaaggctatctgttt
gggcgcccgatgcccggcgcgcaactgccgcaatggtgcgaggacgcgggacgcctggcg
gcggaaacctga
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