Orrella dioscoreae: ODI_R4158
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Entry
ODI_R4158 CDS
T05133
Name
(GenBank) Ku domain protein
KO
K10979
DNA end-binding protein Ku
Organism
odi
Orrella dioscoreae
Pathway
odi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ODI_R4158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
odi03400
]
ODI_R4158
DNA repair and recombination proteins [BR:
odi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ODI_R4158
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF3942
Motif
Other DBs
NCBI-ProteinID:
SOE52409
UniProt:
A0A1C3K5K0
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All DBs
Position
I:complement(4561446..4562375)
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AA seq
309 aa
AA seq
DB search
MATRTIWKGAISFGLVHVPVGLHTATTESGVDFDWLDKRTMDPVGYKRINKRTGKEIDRD
NIVKGVEYQDGKYVVLSADEIEQAYPRTTQTIEIDRFVDAAAVPFVFLERPYYLAPLNKG
HKVYALLRDTLAKSGKIGIARVVINTKQHLAALIPAGDALVLNLLRWGDEVKSMDDLDLP
AQDAKRYAPSANELKMAKMLVEDMTGEWQPEAFRDEFKHAVMSLVEKKAKAGKAKTVFEP
EEEAPAYADNVIDLTELLQRSLKGRGGTRKPAAARKAAKAPAKTAKRAGRKATTTTATKP
TAKKTRKAA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacgaaccatctggaaaggcgcgatttccttcggactggtgcacgtgcccgtg
gggctgcacacggccacgaccgaatccggcgtggatttcgactggctggacaagcgcacc
atggacccggtgggctacaagcgcatcaacaagcgcactggcaaggaaatcgatcgcgac
aacatcgtcaagggcgtcgaataccaggacggcaagtatgtcgtgctgtcggccgacgag
atcgagcaggcctatccgcgcaccacacagaccatcgagatcgaccgtttcgtcgacgct
gccgcggtgccgttcgtgttcctggagcggccctattacctggcgccgctgaacaagggc
cacaaggtctatgcgctgttgcgcgacaccctcgccaagtccggcaagatcggcattgca
cgcgtggtgatcaataccaagcagcacctggccgcgctgatcccggcgggcgacgccctg
gtgttgaaccttctgcgctggggcgacgaggtcaagtcgatggacgacctggacctgccc
gcgcaggatgccaagcgttatgccccaagcgccaatgaattgaagatggcgaagatgctg
gtcgaggacatgacgggcgagtggcagcccgaggcgttccgggacgagttcaagcacgcg
gtgatgtcgctggtcgagaaaaaggccaaggcgggcaaggccaagaccgtgttcgagccc
gaggaagaggcgcctgcctatgcggacaacgtcatcgacctgaccgagctgctgcaacgc
agcctgaaggggcgtgggggcacgcgcaagccagctgcggccaggaaagcggcgaaggcg
ccggcgaagaccgcgaaacgggccggcaggaaggcgaccacgaccaccgcgacgaagccc
accgcgaagaagacgcgcaaggcggcgtaa
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integrated database retrieval system
