Oikopleura dioica: 145699717
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Entry
145699717 CDS
T11913
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
odo
Oikopleura dioica
Pathway
odo03030
DNA replication
odo03410
Base excision repair
odo03420
Nucleotide excision repair
odo03430
Mismatch repair
odo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
odo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
145699717
03410 Base excision repair
145699717
03420 Nucleotide excision repair
145699717
03430 Mismatch repair
145699717
03440 Homologous recombination
145699717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
odo03032
]
145699717
03400 DNA repair and recombination proteins [BR:
odo03400
]
145699717
Enzymes [BR:
odo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
145699717
DNA replication proteins [BR:
odo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
145699717
DNA repair and recombination proteins [BR:
odo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
145699717
MMR (mismatch excision repair)
DNA polymerase delta complex
145699717
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
145699717
NCBI-ProteinID:
XP_081633111
LinkDB
All DBs
Position
2:9310834..9314724
Genome browser
AA seq
1064 aa
AA seq
DB search
MVSKKREPDSTGPSSKKQKRSDSDPQENEINWYKPGDIERKWGKKWGRPEGEKGEDLVFQ
QIDLDKFVEFENGDPKPTIRIYGTDKKGSSICLYVNGFKPYFYVPAPKGFTEDYCGQFVK
ELNDRVVSNLGSRAGIMKGVTKAVLGAEMCEKEDIYGYNSQGKVPFIKITVASWQLMTPC
KNVLEPGWKVTTDNGQFHHNFKMFESHIDYEVRFMVDCKVRGASWVTVPHGKYQRRWDKQ
TTCSIEADVHFSDLIPHEPEGEWADIAPMRIFSYDIECAGRKGIFPEPEHDPVIQIACMV
QNQGEPSPFIRMIFTLNSCSPIVGNHVFCYEKEIDMLEGFAELIRLVDPDIITGYNIMNF
DTSYLVNRANTLKSKTFPFLGRVRNTASKVRDAKFSSKQMGTREYKEVNIDGRIQLDVMV
SIVQNYKLRSYNLNAVSYHFLKEQKEDVHHSIISDLQAGDESDRRRLAVYCLKDALLPLR
LMDKLMFVVNTMEMARVTGVPVSYLLTRGQSVKVMAQLLRESSIRDLVMPVLKTEQSDQY
EGATVIDPIRGYYKEPITTLDFASLYPSIMRAHNLCYTTLLQNKLERSKLSPDQFIKTPT
GDEFVKPEVREGLLPMILKNLLEARGRAKKELKIEKCPFKKKVLDGRQLALKISANSVYG
FTGAQVGKLPCLPISGSVTAFGRMMIDETKRHVEANYTRANGYEHDAQVVYGDTDSVMIK
FGTDSIAKSFELGTEAAKFVTAKFIQPIKLEFEKVYCPYLLINKKRYAGLYYSSNPEKHD
KMDCKGIETVRRDNCRLASELISKCLDMMLINRDPEGAVEYAKDTIRDLLLNRVDISKLV
ITKELTQKAEGYASKQAHCELAERMRKRDPGSAPQLGDRVPYVFIKKPKNTPAYEKAEDP
LYVLDNSVPIDAEHYLHHSLENPLLRIFEPVLGEAKAKSVLFKGDHTRVKAVTTSKVGGL
FKFTQKRETCMGCKAAMPKGVDGNVCPSCKENEIELYLSHKAELDDLRIDFNKLWSQCQR
CQKHMQKEVLCSNCDCPIFYRRKKIRSDLMKAEKAVAKFGPIDW
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggtttccaagaaaagggagccagattcgaccgggccgagtagtaaaaagcagaaacgc
tcagactcagatccacaggagaacgaaatcaattggtataagccgggtgatattgaacga
aaatggggtaaaaagtggggacgtccagagggagagaaaggagaagacctcgtcttccag
cagattgatttggataaattcgtcgagtttgaaaacggggatccaaaaccgaccatccga
atttatggcaccgataaaaaaggatcatcaatctgtctttatgtcaatggtttcaagcca
tacttctatgttccagcaccaaaaggcttcactgaggactactgcggccaatttgtgaaa
gagctcaacgaccgagttgtaagcaatctcggttctcgcgcaggaattatgaagggcgtt
acaaaagctgtactcggagcagaaatgtgcgagaaggaagatatctacggatacaactca
cagggaaaagtgccatttataaaaataactgttgcttcttggcagctaatgacgccgtgt
aaaaatgtgttggagccgggatggaaagtgacgactgacaatggtcaatttcatcacaat
tttaaaatgttcgaaagtcacatcgattacgaagtccgtttcatggtcgattgcaaagtc
agaggagcgtcttgggtaacagttcctcacggaaaatatcagcgaagatgggataagcaa
acaacctgctctattgaagccgatgtacacttctctgacttaattcctcatgaacctgaa
ggtgaatgggcggacatcgcccccatgcgaatcttcagttatgatatcgaatgcgcagga
cgaaagggtatctttccagagccggaacatgaccccgtcattcaaattgcttgtatggtg
caaaatcaaggtgaaccctcgccgtttattcggatgatttttacactgaactcttgcagt
cccatcgttggcaaccacgtcttctgctacgagaaagaaattgacatgctggaaggcttt
gccgaacttattcgtctcgttgaccctgatattattacaggctataatatcatgaacttc
gatacttcataccttgtaaaccgagcgaatacgctcaagagtaaaaccttccccttcctc
ggccgtgtccgaaacaccgcttccaaagtacgtgatgccaaattctcgtccaagcaaatg
ggcacgagggaatacaaagaggtaaatattgatggcagaatccaactcgacgtcatggtc
tctatcgttcaaaactacaaactccgatcttacaacttaaacgcagtttcctaccatttc
ttgaaagagcaaaaagaagatgtccaccattcaatcatttctgatttgcaagcaggagat
gaatcagatcgacgacgattggctgtttactgcctcaaagatgcgttgctaccacttcga
ctcatggacaagctgatgtttgtggtgaatacaatggaaatggcgagagtaacgggtgtc
cctgtgtcttatcttcttactcgaggacaatctgttaaagtcatggcccagcttctacgt
gagtcctcgattcgtgatcttgtcatgcctgttttgaaaacagagcagtctgatcagtac
gagggagcaacagtcatcgacccgatccgtggctactacaaagagcccatcacgactttg
gattttgcctctctttatccctcaatcatgcgcgcgcacaatctatgctatacaacactg
ttacaaaataaattagagcgctcgaaactttctccggatcagttcataaaaactccgact
ggtgatgaattcgtcaaaccagaagtccgggagggccttctaccgatgattttgaaaaat
cttcttgaagctcgaggaagagcgaagaaagaactcaaaatcgagaaatgtcctttcaag
aaaaaagtgttggatggtcgacagcttgctctgaaaatttcggccaactctgtctatggt
ttcaccggagcgcaggttggaaagcttccgtgcttgccaatatctggatctgttaccgct
tttggccgaatgatgattgacgagacaaagagacacgttgaggcaaactacaccagagcc
aacggatacgagcatgacgcccaagttgtttacggtgatactgattctgtcatgatcaaa
ttcggaacagactcgatcgcgaaatcctttgagcttggtactgaggcagcaaaatttgtt
acggccaaattcatccaaccaatcaaactggagtttgaaaaagtctactgtccgtatctt
cttatcaacaaaaagcgatacgcagggctttactactcatccaatccggagaagcatgat
aagatggattgcaagggtatcgaaactgtccgtcgtgataattgccgacttgcttctgag
ctcatctccaaatgccttgacatgatgttgatcaaccgggacccagaaggcgcggttgag
tacgcaaaagacaccatcagagatcttcttctcaatcgagttgatatctccaagctagtc
atcacaaaagaactgacgcagaaagccgagggatacgcttcaaagcaggcacactgcgaa
ctcgccgaacgaatgcgaaagagagacccaggatccgcaccgcagctcggtgatcgagta
ccctatgtgttcatcaaaaagccaaagaacacacctgcttatgagaaggcagaagatccg
ctctatgtgcttgacaactcagttccaatcgatgctgaacattatcttcaccattcgctt
gaaaatcctcttcttcggattttcgagcctgttcttggtgaagcaaaggcgaaatccgta
cttttcaagggagatcacactcgagtcaaagctgtgacgacttcaaaagttggtggactt
ttcaaattcacccagaagcgagagacatgcatgggatgcaaagcggcgatgccaaagggt
gttgatggaaatgtctgcccgagctgcaaagagaacgaaatcgagctctacttgagccac
aaggcggagctcgatgatcttcgaattgattttaacaagctctggagccagtgccagcgc
tgtcagaagcacatgcagaaggaagttctttgttccaactgcgactgtccgattttctat
cgccgaaagaaaatccgctccgatctgatgaaagcagaaaaggctgttgccaaatttggt
cccatcgactggtga
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