Oikopleura dioica: 145705399
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Entry
145705399 CDS
T11913
Name
(RefSeq) small ribosomal subunit protein RACK1-like
KO
K14753
guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
odo Oikopleura dioica
Pathway
odo03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
odo00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
145705399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
odo03019
]
145705399
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
odo04147
]
145705399
Messenger RNA biogenesis [BR:
odo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
145705399
Exosome [BR:
odo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
145705399
Exosomal proteins of colorectal cancer cells
145705399
Exosomal proteins of bladder cancer cells
145705399
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_SPT8
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
DSE1_N
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
ASA1
CFAP251_N
TRM82_WD
Beta-prop_SCAP
Beta-prop_NOL10_N
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
PAC11
Beta-prop_WDR75_2nd
Beta-prop_pof12
Beta-prop_NUP159_NUP214
Cytochrom_D1
Beta-prop_IP5PC_F
Tricorn_2nd
Beta-prop_RSE1_2nd
Beta-prop_IFT140_2nd
DUF7165
Motif
Other DBs
NCBI-GeneID:
145705399
NCBI-ProteinID:
XP_081638989
LinkDB
All DBs
Position
PAR:complement(1470566..1471927)
Genome browser
AA seq
317 aa
AA seq
DB search
MTEQMTFKGSLKGHNGWVTQIATTPIFPDMLLSSSRDKTIIMWHLTREEGSYGTPKRRMQ
GHSHFVSDVEVSSDGQYALSGSWDATLRLWDLASGNTVRRFVGHTKDVLSVSFSPDNRQI
LSAARDRTIKLWNTVGVCKFTIQENCHTEWVSCVRFSPLPQTPVIVSAGWDKLVKVWNLT
NCKLKRDYRGHTGYLNTVNVSPDGSLCASGGRDGQAKLWDIGSEEAKPLHTLEAGDEIYA
LCFSPNRYWLCAAAGGIIKIWDLEQKNLVDELKPEVVADGGRAECISLCWSSDGQTLFSG
YNDGQIRVWSMSIRSVM
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcaaatgaccttcaagggttccctcaagggccacaacggctgggttacccag
atcgccaccacccccatcttcccggacatgctcctctcttcttcccgagacaagaccatc
atcatgtggcacttgacccgagaggagggctcctacggaactcccaagcgacgaatgcag
ggtcactcccacttcgtctctgacgtcgaggttagctccgacggccagtacgccctctcc
ggctcctgggacgccaccctccgactttgggacctcgccagcggcaacaccgttcgacga
ttcgtcggccacaccaaggacgtcctctccgtctccttctcaccagacaaccgacagatc
ctctctgccgcccgagaccgaaccatcaagctctggaacaccgtcggtgtctgcaagttc
accatccaggagaactgccacaccgagtgggtttcctgcgtccgattctcgccccttccc
cagactcccgtcatcgtctccgctggctgggacaagcttgtcaaggtctggaaccttacc
aactgcaagctgaagcgagattaccgaggccacaccggctacctcaacaccgtcaacgtc
tcccccgacggttccctctgtgcctccggtggccgagacggccaggccaagctctgggac
atcggaagcgaggaagccaagcccctccacaccctcgaggccggcgacgagatctacgct
ctatgcttctctcctaaccgatactggctctgcgctgctgctggcggcatcatcaagatc
tgggatctcgagcagaagaacctcgttgatgagctcaaacccgaggtcgttgccgacggt
ggccgagccgaatgcatctccctctgctggtccagcgatggtcagaccctcttctctggc
tacaacgacggccagatccgagtctggtccatgtccatccgctctgtcatgtaa
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