Oikopleura dioica: 145712242
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Entry
145712242 CDS
T11913
Name
(RefSeq) DNA-binding protein SMUBP-2-like
Organism
odo Oikopleura dioica
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
Viral_helicase1
AAA_19
AAA_22
SMUBP-2_HCS1_1B
SLFN-g3_helicase
AAA_16
NAT10_TcmA_helicase
AAA
NPHP3_N
DEAD
UvrD_C_2
NTPase_1
ResIII
nSTAND6
RuvB_N
NACHT
PhoH
AAA_33
DUF815
ABC_tran
nSTAND3
DUF8323
RNA_helicase
MeaB
TsaE
nSTAND_NTPase5
AAA_5
bpMoxR
AAA_28
nSTAND1
UvrD-helicase
NB-ARC
AAA_29
Motif
Other DBs
NCBI-GeneID:
145712242
NCBI-ProteinID:
XP_081646056
LinkDB
All DBs
Position
1:13058251..13061145
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AA seq
646 aa
AA seq
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MIIQTKRVGVATSQSEKTADWNFYKNLFDLDLGLGSKINMVRRIDKFLHALKKEKEEEEA
QLLELLAGNSSAKQLQRAGKALANQVVQAVRTGLFERMVVTCSPAHGGAFPATEISHGKP
VILRMPDTTYRGFVFSTSEMSVDVCVDVGEDGEKIAVGDRLDIMPAPDDITYRRMKAASE
EMKKVIEQNSSRTVDIIFGESQPAPHVSTESFLKPKTDVKNLNKEQLEAVGASLAIQDLM
CLHGPPGTGKSTTVAAIVAEAAQRGIKTIGTITCPSNAAVDALVEKLAKSYGDYLQLRDL
KSDMFAASGRERGTLRKELRDREKKCSAEILKNSHAVIATCTVVGMKSILDVIDDPDHFG
LAIVDEAGQAVEPAIYPILRRCSKKLILAGDPAQLPPTVMSKGASILTKTLLEDLMTRFP
ANTVLLKRQYRMNKMISDWVSDSMYNGELIADESVKDHTLADLLQNVTEVGKLSGADFLE
DIISSPLTLIDTVGSNMDEDQFSEDQSKSNPGEALLATLTTKLLISAGIKAKNIAIISPY
VAQVQLIAKLVGPSVSVRTVDGYQGGEAEVVILSLVRSNSDGTTGFLSDKRRLNVAVSRA
RRSCIIIGDSGTVTRDSFIEKMFEYFGENATLISPNQFQERGSTCK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgataatccaaaccaagcgcgtgggtgttgcaactagccaatcagagaaaacagccgat
tggaatttctataagaatcttttcgacctcgatcttggccttggaagcaaaatcaacatg
gtccgacgaatcgacaagttcctccatgccctgaagaaggaaaaagaggaggaagaagct
caattactcgagcttctcgctggaaattcttcggcaaaacagctgcagcgcgctggaaaa
gctttggcgaaccaagtcgttcaagcagtcagaactggtcttttcgaacgaatggttgtc
acatgctctcctgctcacggaggagcctttccagcgacagaaatctcacatggaaaaccc
gtgattctgcgaatgccagacacgacttacagaggcttcgttttctccacctccgaaatg
tcggtcgatgtctgcgttgatgtcggcgaggatggcgaaaaaatcgcagttggagatcga
ctggacatcatgccagcaccggacgatatcacttaccgtcgaatgaaagcagcttcagag
gaaatgaaaaaagttatcgagcagaattcaagtagaactgtcgacatcatctttggagag
tcgcagccagcgccgcatgtgtcgacggagagctttttgaagccaaaaacggatgtcaag
aacttgaataaagaacaacttgaagctgtgggagcttcactggcgattcaagacttaatg
tgtcttcatggaccgcctggaacgggaaaatcaacgactgtagctgccattgtcgccgaa
gctgcccagcgaggaatcaaaactataggaacgatcacgtgtccatcgaacgcagccgtc
gatgcgcttgttgagaagctggcaaaaagttatggtgattacctccagttaagagatctc
aaatccgacatgttcgctgcctccggtcgagaacgaggaaccctccgaaaagagctccga
gatcgggagaaaaagtgctctgccgaaattctcaaaaactctcatgctgtcattgctaca
tgcactgttgttggaatgaaatccatcctcgatgttattgatgatccagatcattttggc
cttgcgattgttgatgaagccggacaagcagtagagccagcaatttatccgattcttaga
agatgttcgaagaagttgattttggcgggagatccagcgcagcttccaccaacggtgatg
tcaaagggtgcgtcgattctgactaagacgctactcgaagacttgatgacacgatttccg
gcaaatacagtcctactgaagcgacagtatcgaatgaataagatgatttctgactgggtg
tctgacagtatgtacaatggagaactaattgctgatgagtcggtcaaagatcacacgctt
gctgatttattacagaatgtgactgaagtaggaaaattatctggagcggattttctggaa
gatatcatcagctcaccgttgactttaatcgacacagtcggcagtaatatggacgaagat
caattcagcgaagaccaatccaagtcaaatccaggggaagctcttttagcgactctgacc
acgaagcttttgataagcgcggggatcaaggcaaagaatattgcgataatttctccgtat
gttgcacaagttcaactcattgccaagcttgttggcccttctgtgtcggtcaggactgtc
gatggatatcaaggaggagaagcagaagtagtcattctctccttggttcgatccaattct
gatggaacgaccggtttcttatcggacaaaagacgactgaacgtcgcggtgtcccgtgct
agaagaagctgtattattattggtgatagtgggacagtaacgagggatagttttatcgaa
aagatgttcgagtactttggcgaaaacgcgactctcataagtccaaatcaatttcaggaa
cgaggttcaacttgcaagtaa
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