Ostrea edulis (European flat oyster): 125645651
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Entry
125645651 CDS
T09123
Name
(RefSeq) synaptojanin-1-like isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed00562
Inositol phosphate metabolism
oed01100
Metabolic pathways
oed04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
125645651
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
125645651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125645651
Enzymes [BR:
oed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
125645651
Membrane trafficking [BR:
oed04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
125645651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
SOGP_N
Motif
Other DBs
NCBI-GeneID:
125645651
NCBI-ProteinID:
XP_048727255
LinkDB
All DBs
Position
6:complement(22219898..22250522)
Genome browser
AA seq
1573 aa
AA seq
DB search
MAMIKNFRIFHKLEPPYSVIIENKNYEESLMFESNALAVLHSSEAELLKKQYTKILDAYG
CLGVLNYAVGEDNVLFLVLVTGCLSVGKICDSEIFRITATQFLSLRNGQGDEERISEVKK
LLNSGTFYFAWSAAGTTWDLTLCAQRKIQEHDTDNRFFWNRMLHVHFQRFAIDCDRWLFK
MICGGVEIRTIYAAHRQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIFLDE
KISSFIQTRGSVPLFWEQPGIQVGSHRVKMSRGHEASAPAFDRHLNMIKDLYGDQVLINL
LGQKEGEHMLSQAYLKHHQASTFHQRIPLINFDYHSEVRGNAKNLDRLKHKVLKQLVDFG
YFYSVDNLGDRFQSGTMRSNCLDCLDRTNAVQSMLGMEMLPRQLESLGLAEKQQMVSRFL
DIYRQIWSANGDHVSRIYAGTGALGGGRSKYSDAARSATRTIQNNFLDNSKQEAIDILLL
GNTLRGELADKARALLTTRILHAPPAILQSMVNGYPEFTDVESLRIFIGTWNVNGGKHFR
SIAHKHESISDWLLDAASITKEKNPDMLEKAANWEKPVDIFAIGFEEIVDLNASNIMKAS
TTNAREWQKELLKIISRDHKYVVLNSVQLVGVILYIFIRPHLAPFVRDVATDSAKTGLGG
AAGNKGGVAIRFLYQSTSLCFVCAHLSAGQSQVNDRNSDYHEISRKICFPMITPTVRKGR
TIGSHDYVFWCGDFNYRIDLPREEVLSLIEAQNWGALQACDQLKVQKEAGNVFKGYTEGP
TDFAPTYKYDLFCNDYDSSEKCRCPAWTDRILMRRKPLIHHSPQLLEDGPVWNPGKLLLY
NRVELKTSDHRPVLSLYDIDTLKVEDNKKEQKLQEIVSQQGPPDGTVIISVETEEMEQEL
VEAIVHFFSDVGEIVLVRFVEADLWLIFKTGQFALKALNYDGTEINGTTIRTRLKTEEWR
AQIQQELKICIVNSTPLYNQFSNSLLGEDFSTPALEFESEEEDDAEIQDSLLGIPMDQIR
PSSPNGSGRNSPYSDDGYLDQPSGPPPRPVNKPPVPSIGPNRESPDPFTIQTKSPGPEPG
SRPAPPQRPSGPPVKPPPPQRPKAPPVKPTHGAEKSSETDVKRPPPIVRKPISSQSIKKI
KTKQQTKTQAISIGRPTNVTHHGHASTIEDAQSLIEKLMVGGGSTLPPPLLPDSDNKIVR
SLTSEDVASDKAEVEAPKPVPRNKTSGNISSMTEAPQRPRDSPPSVQARTEARPVPAPRR
EIQSMVINEGVQSKPSRGPPPLPPTRPQSWMPSTQKVSDDQTYAVVNKLTDSCNSASQNI
IDAPLPLDRDSMVERDPFDTSSVPSQFLNQASQTKSRPPVSRPPPPVPIRHMLNNQDLAT
SASSDIQNDQTQWDDFHSNSENSQSIPSFSSPEVQSLDDSSDKNSSSMGPPSESPPPVPL
EFSEGHSPDPSPTPPSDSPPSEPPPPLPSEGPPLEPPPPLPSEGPPSEAPPPPPVDKEDQ
FAEFKANFDSFQNSATPLDHLPPDPPNHSPQEPRSRGPVPSRVLPPVPTRGPAAGNPPVP
KRPMNHPPVPPRS
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgataaaaaatttccgtatttttcataaattggaaccgccgtacagtgttata
atcgaaaacaagaactacgaagaatctctgatgtttgagtcgaatgcactcgcagtttta
cattcaagtgaagcagagttgctaaagaaacaatacacaaaaatactggatgcctatggc
tgtcttggagtattaaattatgcagttggagaggataatgtgctgttccttgtattggtc
accggctgtttatcggtgggtaaaatatgtgattcggaaatatttcggataacagccacc
caatttctgtctctgcggaatggacagggcgatgaagagagaatatcggaggttaagaag
ctgttgaattcagggactttctactttgcttggtcagctgccgggacaacttgggacctt
actttatgtgctcagaggaaaatccaggaacatgacacggataacagatttttctggaac
agaatgcttcacgtccatttccagaggtttgctatagactgtgacaggtggttgtttaag
atgatctgtggaggtgtggaaataaggacaatctatgctgcccataggcaagccaaggct
tgtttgatatcacggctcagctgtgagagggctggaaccagattcaacgtcagaggaact
aacgatgatggtcatgtggccaactttgtggagactgaacaggtcatattcctggatgaa
aagatatcatcatttattcagacaagaggttcggttccgttattttgggaacagcctgga
atccaggttggctctcatcgagtgaaaatgtcgcgaggacatgaagcttcggccccagcc
ttcgacagacatctgaacatgataaaggacctgtatggggatcaagtgctaataaactta
ctcggacagaaggagggggagcacatgctgagtcaggcatatctgaaacatcaccaagct
tccacatttcatcaaagaattcccctgattaactttgactaccattctgaagttcgaggg
aatgctaaaaacctggatagactgaagcacaaggtcctcaaacaactggtggattttggt
tacttttacagtgtggataatctgggagacagatttcagtccggtaccatgagatcaaac
tgtctagactgcttggatagaaccaatgctgtacagtccatgctgggaatggagatgctg
cctcgtcagctggagagtttgggactcgctgagaaacaacagatggtgtccaggtttcta
gacatctaccgccaaatatggagtgctaatggggatcatgtcagcagaatttatgctgga
acaggggctcttggagggggtagatcaaagtactctgatgctgcccgctcagccacacga
accatacagaataacttccttgacaacagtaaacaggaagcaatagatatcttgttgcta
ggcaacacattaaggggagaacttgcagacaaggcccgggcattactaactaccagaata
ttacatgcccctccagctattcttcagtctatggtcaatggctatcctgagttcacagat
gtggagagtctgaggattttcatcggaacctggaatgtgaatggtggaaaacattttagg
agtattgcgcacaaacacgaatctatatcagactggctgttagacgctgcctccataact
aaagagaaaaacccagatatgcttgagaaagcagctaactgggagaagccagtggatatt
tttgccattggttttgaggagatcgttgaccttaatgccagtaacatcatgaaagcaagt
accacaaatgccagggagtggcagaaggagttactgaaaataatatcaagagaccacaag
tatgtggtgttgaacagtgtccagttggtgggggtcattctgtacatattcatacgccct
catctggcgccatttgtcagggatgttgccacagattctgctaagacaggattaggaggt
gcagccggtaacaaagggggcgtggccatacgttttctctaccaaagcacgtcgctttgt
tttgtctgtgctcatttgtcagctggacagtctcaagtcaatgaccgcaatagtgactac
catgaaatctctagaaaaatctgcttcccaatgattacaccaaccgttcgaaagggaagg
accattggttcccatgactacgtgttctggtgtggggactttaactataggattgacctt
cctcgggaagaggtcctcagtttgatagaggctcaaaactggggagcactccaagcatgt
gaccagctgaaggtccagaaagaggctggaaatgtctttaaaggttatactgagggaccg
acagacttcgcccctacctacaagtatgacttattttgtaatgactatgactcgagtgag
aagtgtcgttgtccagcctggacggacagaattctgatgagaagaaaacctctcattcac
cattcaccacaattattagaggatggaccagtgtggaaccctgggaaattgttgttatat
aacagggtagaactgaagacatccgatcacagacctgtcctatcactgtatgacatcgac
acattgaaagtggaagacaacaagaaggagcagaagttacaggagattgtcagccagcaa
ggaccaccagatggcactgtcatcatttctgtggagactgaagaaatggagcaagagctg
gtggaggccattgttcacttcttttctgatgttggagaaatagtccttgttagattcgtg
gaagcggatttatggctgatctttaagacgggacagtttgcactgaaggcattgaactat
gacggcacagagataaatggaacgaccataaggactcgtctgaagacagaggaatggcgg
gctcagatacagcaagagttaaaaatctgtattgtaaactccaccccactctataaccag
ttctccaacagcctgctgggggaggacttcagcacaccagccttggagtttgaatcagaa
gaagaggatgatgctgagatacaggattctttgttaggaatccccatggatcaaattagg
ccaagttcaccaaacgggtcaggacggaatagtccatactcagatgatgggtatctagat
caaccctctggcccccctccaaggccagtgaataaacctcctgtcccttccattggtcca
aacagagagtcacctgacccatttaccattcagaccaaatcaccaggaccagagcctgga
tcgagaccagcacccccacagcgaccctcagggccaccggttaaacctccaccccctcag
cgacccaaagctcctcctgtcaaaccaacacatggtgcagagaaatctagtgaaacagat
gtcaaaagaccacctccaatagtaagaaaaccaatcagttcccaaagtatcaagaaaatc
aagaccaaacagcaaacaaagacacaggcaataagtattggtcgtccaacgaacgtgacc
caccacggacatgcgtccactatagaggatgcccagtcattgattgagaaactgatggtc
gggggagggagcacattacctccacctctgctgccagactcagacaataagattgttaga
agtctaaccagtgaagatgtggcaagtgacaaagctgaagtcgaagcacctaaacctgta
ccaagaaacaagacttctggaaatatctcttccatgaccgaggccccgcagcggccaaga
gacagcccacctagtgtacaggcacgtactgaagctcgccctgttcctgctccaaggagg
gaaattcagagtatggtcattaatgaaggggtacaatccaaaccctcgagaggaccacct
ccccttccacccacacgaccacaaagttggatgccctcaacccagaaagtgtcagatgat
cagacttacgcagtcgtaaataaattgactgattcttgtaatagtgctagtcaaaacatt
attgatgctcctttaccactggacagagacagtatggtggagagagatccgtttgacact
tctagtgttcccagtcagtttttaaatcaggcatcacaaactaagagtagacctccagtc
agtcgaccccctccccctgtacctatccgacacatgttaaacaaccaggatctcgcaact
agtgcttcctcagacatacaaaatgaccaaacccagtgggacgactttcacagcaattct
gagaattctcaatcaattccatcttttagctctcctgaggttcagtcgttagatgatagt
tctgataaaaattcatcaagtatgggtccaccttctgaatctccaccccctgttccgtta
gaattttcagaaggacattctcctgatccctcacccactcctccatcagacagcccccca
tcagaacctccaccccctcttccttcagagggtccccctttggaacccccacctcctcta
ccttcagagggtcccccatctgaggcccctccacctccaccagtggacaaagaagaccaa
tttgcagagtttaaagccaattttgatagttttcaaaattctgcaacacccctggatcat
ttaccaccagatccccctaatcattctccccaggaacccagaagtaggggaccagtacca
tctagagttcttcctcccgttcccacaaggggaccagctgcagggaatccccctgttcca
aagaggccaatgaatcatcctccagtaccacctaggtcttaa
DBGET
integrated database retrieval system