Ostrea edulis (European flat oyster): 125645833
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Entry
125645833 CDS
T09123
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed00450
Selenocompound metabolism
oed00970
Aminoacyl-tRNA biosynthesis
oed01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
125645833
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125645833
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oed01007
]
125645833
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oed03016
]
125645833
Enzymes [BR:
oed01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
125645833
Amino acid related enzymes [BR:
oed01007
]
Aminoacyl-tRNA synthetase
Class I (U)
125645833
Transfer RNA biogenesis [BR:
oed03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125645833
Prokaryotic type
Other AARSs
125645833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
WHEP-TRS
Anticodon_3
GST_N_5
tRNA-synt_1
GST_C
Arc1p_N_like
tRNA-synt_1e
GST_C_2
DZR_2
Motif
Other DBs
NCBI-GeneID:
125645833
NCBI-ProteinID:
XP_048727649
LinkDB
All DBs
Position
6:24197949..24236215
Genome browser
AA seq
1000 aa
AA seq
DB search
MKLYTDQGNFKSLKVLAALELTGLTFTFTECGHEERVAPYLSCTTLPVLEVSPQRFIFSP
NSATRYILNKKYEEEDPNVDKWLEWESSQFQPHLVRYLVSVLVHRKADTESLNRLHQLLK
FLNTELKNKSLIKGSDSSAADFVLWGSLYPLFKGAAEIKGLESQYSNIKSWFNALNNLPC
CQAALTRVVPGGDTTCLKASLSAQPVPLLEQEARSEESIQKTKPQKKKMENATENTTAEE
SLLTKEASTEEIQSAKESWRTGKSKCPKPRERKHPILPKSGERNLLITSALPYVNNVPHL
GNIIGCVLSADVFSRYCRLRNYNCLYICGTDEYGTATETKAIEEGLTPKEICDKYNKIHN
EIYEWFNISFDKFSRTTIPEQTRIAQDIFWKLEKNGYILRDSVEQLQCQKCLRFLADRFV
EGTCPLCGYDDARGDQCDACGKLLNAVDLKDPKCKVCQGIPMVKSSRHLFLDLPKIASKL
QTHLGKEFGRGMWTNNARIITNSWLRDGLKPRCISRDLKWGIQVPLEGFTDKVFYVWYDA
PIGYISATASYTDQWEQWWKNPKKVELYNFLGKDNVPFHTVIFPCTLLGAEDNYTIVNHM
SATEYLNYEDTKFSKSRGTGVFGHQAKETGIPADVFRFYLLYVRPESQDSSFSWDDFQLK
NNSELLNNLGNFINRALMFVSNNFGGEIQKMNLTDEDFHLLALVNRELRTYIENMEQVKL
RDSIRNILSISRLGNQYMQFNKPWVLVKGSDTDRLRAGTVVSLSANLATLLSILVQPYMP
MVSATIQGQLKTPSDCNVIHQEFVCHLPPGHKIGKPSPLFEKIESAKIQEMKKMFEGKGA
PQKPTKQTISAGAEDIQKLTDEVAAQGKLVRELKAQKADKAAIKEEVEKLLALKKQLAEL
SGENISGGGKQNNSQVKKENKNVKPSPVSGAVDSAETERLTEAVSKQGLLVRDLKSQKAE
KSQIDSEVAILLDLKRQLAVAQGQDPEALTGGKGKKGKKK
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctacactgatcaaggaaatttcaaatctctgaaagtgctcgcagcgcttgaa
ttgactggattgacttttacattcacggagtgtggtcacgaagaacgagtcgcaccttat
ctgtcctgtacaaccctgcctgtcctagaagtcagtcctcagagatttattttctcacct
aactcggccactaggtacatactgaacaagaagtatgaagaggaggatccaaatgtagac
aagtggttggagtgggaaagttcacaattccagccacacctagtccggtatctcgtcagc
gtgctggttcacaggaaggcagacacggaatccctcaacagattacatcaactcctcaag
ttccttaatactgaactcaaaaataaatcactgatcaagggaagtgactcctctgctgca
gattttgtcctgtggggctccctgtatcctctgtttaaaggtgctgcagaaattaaaggt
ttggagagtcagtattctaacattaagtcatggttcaatgctctgaataacctgccatgt
tgtcaggcagccctaactagagtggtgccaggaggggacaccacctgtctaaaggcatca
ctgtctgctcagcccgtgcctcttttggagcaggaggccagatcagaggagtccatccag
aaaacgaagcctcagaaaaagaaaatggaaaacgcaacagagaacaccacagctgaggaa
agtctgctcacaaaggaagcctcaacagaggaaattcagtctgccaaagaatcgtggagg
actggcaaatcaaagtgtccaaagcccagggaaagaaaacaccccatattacctaaatca
ggggagaggaatcttttgatcaccagtgctctcccttatgtaaataacgttcctcacctt
ggaaacatcataggatgtgttctcagtgccgatgtcttctctaggtactgtcgattaagg
aactataactgcctgtacatttgtgggacagacgaatacggaacagcaacggagacaaaa
gccattgaggagggcctcacccccaaggagatctgtgacaagtacaacaaaatccacaac
gaaatctacgagtggttcaatatttcctttgataagtttagtcgtaccacaataccagaa
caaaccagaattgcacaggatattttctggaagctggagaagaatggatacattctcagg
gacagtgtagaacagttgcagtgtcagaaatgtttaaggttccttgctgaccgctttgta
gagggcacatgtcccctctgtggttatgatgacgcccgcggtgaccaatgtgacgcatgt
ggtaaactactgaacgcagtggacctgaaagaccccaagtgtaaagtgtgtcagggaata
cccatggtcaagtcctcaagacacttgttcctggatttacccaaaatagcgagtaaactc
cagactcaccttggtaaagagttcggtagaggaatgtggacaaacaatgctcgcatcatt
accaactcctggttacgggatggactgaaacctcgctgtatcagccgtgatctcaagtgg
ggcatacaagtacccctagagggattcacagataaagtgttttatgtgtggtacgatgcc
ccgattggatacatatcagcgaccgcttcctacactgaccaatgggaacagtggtggaaa
aatcccaaaaaggtggaactgtataatttccttggtaaggacaatgtccccttccataca
gtgatatttccctgcaccttactgggagctgaagataactacaccatagtcaaccatatg
tctgctacagaatacttgaactatgaggatacaaagttctccaaaagccgggggacaggg
gtgtttggtcatcaggctaaggagacgggaatccctgccgatgtgtttcgattctacctc
ttgtatgtacggccagagtcacaggatagtagctttagctgggatgattttcaactgaaa
aacaacagtgagctcttaaataacttgggaaacttcatcaacagggctttaatgtttgtc
agtaataattttgggggagagattcagaagatgaatttgacagatgaagatttccacctg
ctggcactagtgaacagagaactgcgcacctacatagaaaatatggaacaagtcaagctc
cgagactcaataagaaatattttgagtatatcaaggctggggaaccagtacatgcagttc
aacaaaccctgggtcctggtgaagggcagcgatacagacagactccgagcaggaacagtg
gtcagtctgtcagctaacctggccaccctgctgtccatacttgtccagccctacatgccg
atggtcagtgccactatacaggggcagctgaagacaccatctgactgtaatgtcatccac
caagagtttgtgtgtcacttaccgcccggacataagataggcaagcccagtcctttgttt
gagaaaatagaatctgccaaaattcaggaaatgaagaaaatgtttgagggaaaaggtgct
ccacagaaacccaccaagcagactatctctgccggtgctgaggatattcagaagcttact
gatgaagtcgcggctcagggaaagttggtgagggagctgaaagcacagaaagcagataaa
gctgcaataaaagaggaggtggagaaactactagctctaaagaaacagctggcagaattg
tcaggggaaaacatttcagggggaggaaaacagaacaacagccaagtgaagaaggaaaat
aaaaacgtcaaaccatctcctgtaagtggagcagtggacagtgcagagacagagagactc
actgaggctgtttctaaacagggattattggtgcgggatctgaaatcccagaaagcagaa
aaatcccaaattgattctgaggtggccattttattggatctgaagagacagctggctgta
gctcagggtcaggatccagaggccctgacagggggaaagggcaagaaagggaaaaagaaa
taa
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