Ostrea edulis (European flat oyster): 125645839
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Entry
125645839 CDS
T09123
Name
(RefSeq) contactin-5-like isoform X1
KO
K06761
contactin 3/4/5/6
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oed04515
]
125645839
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oed00537
]
125645839
Cell adhesion molecules [BR:
oed04515
]
Immunoglobulin superfamily
Contactins
125645839
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oed00537
]
Others
125645839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
125645839
NCBI-ProteinID:
XP_048727658
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All DBs
Position
6:32918526..32963374
Genome browser
AA seq
1279 aa
AA seq
DB search
MNGCKHQSSQSTWAGRSGIQTCAMINTLFLVTLCVWAVQSQFYECPDDWVAFDAGQRCYK
FKAVPTARYDAAVALCLEEANSAYVLSINDAQEHTFISDWLTTQDIVRRVWYTSGIRDPS
NPSYYRWDGDGTNMRFDLSFWNNNGQQVPGNMIGYAFNGVSYGWQHVFPNASLSYICEIS
QQDAYTILTQKRDFSYGVDSTDKKDILYGPTFTVNPTDVTMISKTTSLFVECRASSNPPA
AYKWYRGPQSNQTLITPLTDVRYTMTNGKLSIQAPVESDEGQYRCKAENEFGVIISHPVN
IDFGYLGEFSNVENAPVRSLAYEGAVIVCSQINVKPAATYNWRKQSPGSYKRDPIYTLNN
PHIFISNNGRLYFTEATKVDEADYFCEVTLNVLDDQNAIGSSQAPSRISKRIPLEILNQA
AKTDWGPVIHTDFIEVFPKPPLRGHKIRMECFAYGSVTSYTQTWSFTWNKVGGRMPDRAK
YLDFNRVVEIGNIQYEDEGTYECVVKRKSSVASKVVLLSIESKPYFLIPLDHKHLDEGVE
TTWRCLAYGKPSPTYTWYKNGQLLQPNNNADISINRNILTIRNANKEKHDGMYQCAATNT
HGTSLSAAQVRILAFQPTFQKNRLPESIDAALNGEVVIPCEPEGAPRPEITWIKNNVAIT
GDSRVRIMPNNFLKITNINYGDQGFYECRAKNIYGSDGSFCRLNVKVATTITRPPDLKTE
VYQNKTALIYCTASYDPSLDLVYAWSFSGKIIDVQRDAHYELANLPSGRGLYIKMAQFYH
QGMYECIARTPLNEARAKGDLAVYGPPGEVSGLYADPGTPTTNSIDIFFFPGTNHGFEIE
YFIVEFEIQSEKGKWYHSNETTTVFAPTTIIPGNKRDMRTITVRGLYPGNGYSFRIKAVN
IQGVGPPCIPSSTVNTLDAAPAEPPANLSSRTDGVSVGQLMITWKQLPRKYHGAQGVTYI
LYYRLLKFSSAPDALWSKVIIQNWKQEEVVIQVGEDFYWRQYETKIQAKNGKGTSHNSSI
VIVYSSMGIPVAVPTNIWGEGYNSTALLVHWNPVPDTREEIKGKLGGYQVNYYLRTQSAE
DTKDFSYKRSIRFHGQVNSGIVIGLDQDTYYYVEAQVFTDAGLGPLGERNLAETMNPAPS
LYPQEVKVVSKDASSVIISWRGVSTGPYEDSLKGYKIFVWKANEHFRTANPIDVFKFPTE
YTVTGIEKDFVYAVRVAGYSYGGIGRKSPTLYFTLAGSRVPIDTTITQQLLAGGSKILPY
NIIYLSLVTFILRIITLYM
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgaatggatgtaaacatcaaagctctcagtctacctgggcaggtcgatccggaattcag
acatgcgccatgattaacacccttttccttgtaacgctgtgtgtctgggctgttcaatca
cagttttatgaatgcccggatgactgggtggcctttgacgcgggacaaagatgttacaag
tttaaggcggtccccaccgcccgttatgacgctgctgtcgcactttgtttggaagaagcg
aacagcgcctatgtattgtctataaacgatgctcaagaacacacctttatcagtgattgg
ctgaccacccaggacattgtcaggcgtgtttggtacaccagtggaatccgagatccctct
aaccccagctactaccgatgggatggagatggtacaaacatgaggtttgatctcagcttc
tggaataacaatggacagcaagtaccgggaaacatgatcggttacgccttcaacggtgtg
agttatggatggcaacatgtgtttcctaacgccagtctctcctacatctgtgaaatcagc
caacaggatgcctacacgatccttactcaaaagcgagatttcagctatggcgtcgactcg
acagacaagaaagacattctgtatggacctacgtttactgtgaaccccactgacgtcaca
atgatctctaaaactacgtcactgtttgtggagtgtcgggcatcatctaaccccccggcc
gcatacaagtggtaccgtggtccccagagcaaccaaaccctgattactcccctgacggac
gtccggtacactatgactaacggtaagctgtcgattcaggcccctgtggaaagcgatgag
ggtcagtaccgttgtaaagcggagaatgagtttggggtcatcatcagtcaccccgtcaac
attgactttgggtatcttggagaattttctaacgttgagaatgcccccgtgcgatccctg
gcatatgaaggagcagtaattgtatgctcacaaatcaacgtgaagccagcggcgacttat
aactggcggaagcagagccctgggagctataagagagatcccatatacacactaaacaac
cctcacatcttcatctctaacaatggcaggctgtacttcacagaggctacaaaagtcgac
gaggcagattatttctgcgaggtaacactaaatgtccttgatgatcaaaatgccatcggt
tccagccaagcaccaagcagaatcagtaaaagaatcccgctggaaattctgaaccaagct
gcaaaaacagactggggtcctgtgatccacaccgattttattgaagtcttccccaagcct
cccctcaggggacacaagatcagaatggagtgtttcgcttatggctcggtgacgagttac
acccagacgtggtccttcacctggaacaaggtcggcgggcgcatgcctgacagggcaaag
tacctggactttaaccgagtggtggagattggaaacattcagtacgaagacgagggcaca
tacgaatgtgtcgtaaagagaaagagttcggtagcatccaaagtggtcctattatctata
gaatctaaaccctattttctgatacctctggaccacaaacacctggatgaaggagtggag
actacctggcggtgtttggcgtatggtaaaccttctcccacatacacctggtataaaaat
ggccaacttctgcaaccaaataataatgctgacatcagtattaaccggaacattttgact
ataaggaacgctaacaaggaaaagcatgatggaatgtaccagtgtgctgccacaaacact
cacgggacctcactgagcgcggcccaagtccgaatactagcattccaaccaaccttccag
aaaaacagacttcccgagagcattgatgccgccctaaatggagaagtcgtcattccttgt
gaaccggaaggagccccgagaccggaaatcacgtggataaagaacaatgtggcaatcact
ggagactctcgtgttagaataatgcctaacaattttctgaagataacaaacattaactat
ggcgaccagggtttttatgaatgcagggcaaaaaatatttatggaagtgacggaagtttt
tgcaggttgaatgtgaaagttgctacgacgataactcgtccccccgacttgaagacggag
gtataccagaacaagaccgccctgatttactgcacggcgtcatatgatccctccctggac
ctggtgtatgcctggtcctttagcggcaaaatcatcgatgtgcaacgggatgcccactat
gaactggcaaatttaccatcgggcaggggtctatacattaaaatggcacagttttaccat
caagggatgtatgaatgcattgcacgaaccccgttaaatgaggctagagctaaaggggat
ctggctgtgtatgggcctcctggagaagtttccggtctctatgcagacccgggaacaccc
accaccaactcaatcgacatattctttttcccgggaacaaatcacggcttcgagatagag
tacttcattgtagagtttgaaatccagtcggagaagggaaaatggtaccatagcaacgaa
acaaccactgtctttgcgcccactactattatcccaggtaacaagcgtgacatgcgcact
ataactgtgcgcgggctgtatcctggcaacggatacagtttccggataaaggcagttaat
atacaaggagttggtcctccgtgcattccatcaagcacggtaaataccctagacgctgca
cctgctgagcctcccgccaatcttagcagcagaacggatggtgtctctgtgggtcaactt
atgatcacgtggaagcaattaccacgaaagtaccacggtgctcaaggcgtgacgtatatt
ttatactacagattgttgaagttttcttccgcacccgatgcactgtggagcaaggtaatc
atacaaaactggaagcaagaagaggtggtgattcaggttggagaagatttttactggaga
caatacgaaactaaaatacaggctaaaaacgggaaaggaaccagccataattcatccatt
gtcatcgtgtactcatcaatgggcataccagtagctgttccaaccaatatatggggagag
ggttacaactccactgcactgttggtacactggaacccggtcccagacacccgggaggaa
atcaaaggcaaattagggggataccaggtcaattactatctcagaactcagagtgctgag
gacaccaaagatttcagctacaagcgatcgattcgattccatggccaggtgaattcgggg
atcgttatagggctggatcaggatacctactattacgtggaggcacaggttttcacagac
gcagggctggggcccttgggagaaagaaatttggcagaaaccatgaatccagcgccatcc
ctgtacccacaggaagtaaaggttgtatccaaagacgcctcctcggtaatcatatcttgg
cggggagtcagcacggggccttatgaagattcactgaaaggatacaagatctttgtttgg
aaagctaatgagcacttccggacagccaaccctatcgatgtgttcaagtttccgaccgag
tacacggtgacaggcattgagaaggacttcgtgtacgccgtccgggtagcggggtacagc
tatggggggataggaaggaagtcccccaccttatactttactctggctggttctcgtgtt
cctatagacactacgattacacagcagctgttggctggaggatccaagattttaccatac
aatatcatatatttgtccctggtaacctttattttaaggataataacactttatatgtaa
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