Ostrea edulis (European flat oyster): 125646016
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Entry
125646016 CDS
T09123
Name
(RefSeq) slit homolog 3 protein-like
KO
K05401
toll-like receptor 3
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125646016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oed04054
]
125646016
04090 CD molecules [BR:
oed04090
]
125646016
Pattern recognition receptors [BR:
oed04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
125646016
CD molecules [BR:
oed04090
]
Proteins
125646016
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRRNT
LRR_6
LRR_LRWD1
LRR_NXF1-5
TIR
LRRCT_2
Motif
Other DBs
NCBI-GeneID:
125646016
NCBI-ProteinID:
XP_048728089
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All DBs
Position
1:68019272..68028427
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AA seq
868 aa
AA seq
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MSGVVFYVALIFGQFLCVTGQGCPSRCTCHKAIVNCHGKKLERVPRNLPMSIERLILSQN
HIEEISRDDFCTLPNLVEIQLQNNKISSIPSHTFTGECIPNIQSIRLENNKINVTEAGAF
YNLSALVNVTLINNKLSQLHPNSFDGTTLKFLHLGSNKLKNIPNLRNLDVLEMLIMEGNE
IQNGTFPHFFRTMLNMTTIGMSNNKISNLDKDVFSNLKYSKIRKLELARNNITKISNESF
LPLSALQSLKLGWNPLTDDELYKALSGLLGAPLTSLSIPGLQFNGLMPSSSFPLLKNANL
STLDMSFNEINNIPPYGFKTLTQLRSLEISNCGIRFIHENAFDGLKNLNNLLLTNNYVQS
VPRNLPKSLLYLYMTGNQVDVLKTNSFSNLGSLRRLYLGHNKILTLFQGAFVGLHNLKDL
QLYGNRINTLPKRLFAPLSSLVSLELQENNLKMIQNSTDTFSSMISLEYLNLADNDCSFL
PVTLFAKLNKSMQTLKLQGNRLGKYFLDDNEGKLFTGLKHLKFLDLSSNQIHTFPSSLFR
DMDSLETLSLRDNWISGWKGNSLSLSSSLHYLDLSNNRIAIIGEETMKGMQSLKTVNFTN
NPFACTCDLRWFRKWIRSTNTTISSVEKYQCNSPLEWKGKPLLSFDETKIECNLVALTTT
IGIVLGVTGLTFAIAFAMYWYRLYIIFLWFLIKKRLCSIRRKGYEEILHWEYDACIVYSE
MQEDSVWIQENILHNFDRGTEDDDNQGAYKIYFDDRDTLGSALKLDTMMNVMEKSRKIII
VITKNTTSDHLMNILIFETLILKRDSLHDIIVVTKDKLSISDIPRLLHSTFIIGDNVEWR
DKAIYRKVFMAKMKEKLEDPILEYEDEA
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgtagtgttctacgtagcgctaatctttggacagtttctctgtgttactgga
cagggctgtccatcacgatgtacatgtcacaaagccattgtcaactgtcatggaaagaaa
cttgaacgagtaccacggaatctacccatgtctatagaacgactgatccttagtcagaat
catattgaagaaatcagcagggatgacttctgcactctacctaaccttgtcgaaatacag
cttcaaaacaacaaaataagttcgattccgtctcacacatttacgggtgagtgtattccg
aacattcaaagcattcgactggaaaacaataagataaatgtcacagaagccggtgcattt
tacaatttatcagcacttgttaatgtaactctgataaataacaaattgagtcagttgcat
cctaattcgttcgatggaacgactttgaaatttttacacctgggaagtaataaactaaag
aatatcccaaacctacgaaatctagatgttctagaaatgttgataatggagggaaatgaa
atacagaatgggacgtttcctcatttcttcaggaccatgcttaacatgacaacaattggc
atgagcaacaacaaaattagcaacttggacaaagatgtcttcagtaatttgaaatacagc
aaaataagaaaattggaacttgcacgcaacaatattacaaagatttccaatgaaagtttt
ctgccactttcagctttacagtccctcaaattaggttggaatccattgacggacgatgaa
ttatataaagccttatccggattacttggcgcacccctaacctctcttagcattcctggt
ttacagtttaatggacttatgccatcatcctcgtttccgttgctaaaaaacgcgaatctt
tcaacacttgatatgagttttaacgaaattaataatatcccaccatatggtttcaaaaca
ctgacccagttaagatctttagaaatcagcaattgcggcattcgttttatccatgaaaat
gcttttgatggtctaaaaaatctgaataatcttttactgactaataattatgttcaatct
gtgccgagaaatcttcctaaaagtttgctttacctttacatgactggaaatcaagttgat
gttttaaaaaccaactccttttcaaatttaggatctttgagacgtctttatttgggccat
aacaaaatcctgactctctttcaaggtgcatttgttggactacacaatttgaaagatttg
caattgtatggaaatcggataaatactcttcccaaacgtttatttgcgccgctgtctagt
ctggtatcactagaactccaagaaaacaatttgaaaatgattcaaaactcaactgacacc
ttttcctctatgatatcattggaatatctaaatctagctgacaatgactgttcctttctt
ccggtgaccttgtttgctaaacttaacaaatctatgcagacgttaaaacttcaaggcaat
agacttggaaaatattttctagatgataacgagggtaaattattcacgggtttaaaacat
ctgaaatttcttgatctatcaagcaatcaaatacacacttttccctctagcttatttcga
gacatggacagtcttgagactttatcattaagggataactggatatccggatggaaaggg
aacagtttatcactctctagttctcttcattatttggatctttcaaataacaggattgca
atcatcggtgaagaaaccatgaaaggaatgcaatcattaaaaactgttaacttcacaaat
aatcctttcgcatgcacgtgcgatctacgctggtttcgaaagtggattagaagtaccaat
acaactatttcaagcgtggaaaaatatcaatgcaattcgcctttagagtggaaaggcaaa
ccccttctgtcattcgatgaaacaaagatcgaatgcaatctcgtcgcccttacgaccact
attggaattgtacttggtgtaacaggactaacttttgcgattgcttttgccatgtattgg
tatcgtctgtacattatatttctctggtttttgataaagaaacgtctgtgttcgatacga
cgtaaaggttacgaagaaatactgcactgggagtacgatgcttgtatcgtttattcagaa
atgcaggaggattccgtgtggattcaggagaatattttgcataactttgatagaggaacc
gaagatgatgataaccagggtgcatacaaaatttattttgacgatcgtgacaccctggga
agtgctttgaaattagatacaatgatgaatgttatggaaaagagcaggaaaatcatcatc
gttattacgaaaaataccacaagtgaccacctgatgaacattcttatattcgaaactctg
atattaaaaagagattcactccacgatatcattgttgttacaaaagacaaattgtctata
tcagatataccgcgacttctgcactccacattcatcataggtgataatgttgaatggaga
gacaaagccatttacagaaaggttttcatggcgaaaatgaaagaaaagttggaagaccct
atccttgagtatgaagacgaagcttaa
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