Ostrea edulis (European flat oyster): 125646034
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Entry
125646034 CDS
T09123
Name
(RefSeq) toll-like receptor 3
KO
K05401
toll-like receptor 3
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125646034
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oed04054
]
125646034
04090 CD molecules [BR:
oed04090
]
125646034
Pattern recognition receptors [BR:
oed04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
125646034
CD molecules [BR:
oed04090
]
Proteins
125646034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
LRR_9
TIR_2
LRR_NXF1-5
LRRNT
LRR_At5g56370
LRRCT_2
CRIM1_C
LRR_LRWD1
LRR_6
Motif
Other DBs
NCBI-GeneID:
125646034
NCBI-ProteinID:
XP_048728105
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All DBs
Position
1:68033234..68041819
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AA seq
878 aa
AA seq
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MRLVLFTSVCLLLAEVAWTDHCPARCFCNKALTSVNCEGKQFMTPPKDIPKSVEKLYLQH
NEIADLEQGSFSELPQLQELYLQNNKLSVIKPMAFSWSRFPSLKLIRLDNNHISTLEMNA
FFNLTTLNITYLTNNYISSINPQAFYGCLRLTFLQLAQNDLMSIPALQSLPGLQQLSLQG
NSITNASFPASYEESTALATIGLSANKIDNLTSETFMSLKNSSVRKLELSRNKITDISSG
AFLPLTKLVSLVISLNPLTATKLHIGLQGLRSSAFRSLNIARLDLGGRLPSSTFALLNGT
GLKQLLMSNNKINQLPSRAFATLKNLEQIDLHSCAIQKVDNDTFAGLLSLTNLNLADNII
EKVPINLPSTLSLLYLNGNKIAALGENAFVNLASLKNLYLGGNKISEVNRFAFRGLVSLQ
KLHLVANSINSLAAELFTPFGMLVSLELNKNNLKTIQNSPDIFSYMTSLQYLSLADNGCS
SMPLESFKHLQSLKYLILDGNNLGRLIGSDRSGTMFAGLNKLQRLTLSNNFLVDIPGQLF
KDLISLQILNMKNNRISGWDNVLFKHTTAMKNLDLSYNTISLVNSSSLEDLSSNNNFQML
NLSNNPFACTCDLRWFRDWVNQTRVTVANVEKYICNSPIEWKGRHFLSFDRTKINCIWFN
LYFVTGVSIASALVVLIICVVMYKKRWWILYKCYRLNSWCCASRNTKEGYQAINGVNGDG
WTFDAYISYAEDDYRWVVNHLLPDIDSGELDRPFNGQFRLFFSDRDSVPGSSVISSISDN
MEISKKVIIVLTKKYLSNAQHKFEIDLAVQLKFEGIINDIIVVNVEGVPFMRIPQSLQRK
VSREEFLMWENEENARNVFKDQLKRELSKVVKATEVVV
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagattggtattgttcaccagcgtttgtcttttgctcgcagaagtagcatggaccgat
cattgtcctgctcgttgtttctgcaacaaggcactgacttcagtcaattgtgaagggaaa
cagttcatgacgccaccaaaagatattcccaaatccgtagaaaaattgtatcttcaacac
aatgaaatcgcagacctagagcagggttcctttagtgagctaccccagctgcaagaactg
tatctgcaaaataataaactgtctgtgatcaagccgatggcattttcatggagtcgcttt
ccgagtttgaaattgatccggctcgacaacaatcacatcagcacattggaaatgaatgct
tttttcaaccttacaaccctcaatatcacatatctaacaaacaattacatatcatctata
aatccccaggctttttatggatgtttaagactgacattcttacagctggcacagaacgat
ctgatgtccattccggctctacagtcactaccaggactgcaacaactcagtttacaagga
aacagtatcacaaacgcgtctttccctgcgagttacgaggaatcaacggcacttgcaacc
ataggacttagcgcaaataagatagataatctgaccagcgagacatttatgagtctaaag
aatagttctgtgaggaagctggaactatccagaaacaaaattaccgatatttccagtggg
gctttcttgcctttaacaaaacttgtatcgctggttatcagcttgaatcccttaacggcc
acaaaattacatattggactgcagggtctccgatcgtccgcctttcgttcacttaacatt
gccagacttgatcttggaggacgattaccgtcatccacgtttgcccttctaaatgggaca
ggtttgaaacagttgctaatgagtaacaacaaaattaatcaactacccagtcgagccttt
gctactttgaagaatctagagcagatcgacctgcacagctgcgcaattcagaaagtagac
aacgatacgtttgctggcctactttctctgaccaatctaaaccttgccgataacataatt
gaaaaggttccaataaatcttccatccacgctgagtctactatatttgaacggtaacaaa
attgcagctcttggtgaaaatgcttttgtgaatttagcgtctttaaagaatctttacctc
ggagggaacaaaatttcagaggtgaacagatttgcattccgaggtttagtaagcctacag
aaattacatctcgtcgctaacagtattaatagtctagctgctgaattgtttactccattc
ggaatgctagtttcattggaactgaacaaaaacaatttgaaaacaatccaaaattctcca
gacatattttcgtacatgacatctttgcagtatctttcgctggcagataatggttgtagt
tctatgccgttggaatccttcaaacacttgcaatcgttgaaatatttaattctagatggg
aataaccttggacgtctaatagggagtgacagatcggggactatgtttgctggactaaac
aagttgcaaagacttaccttatcgaataactttcttgttgatattcctggtcaactgttt
aaagatcttatttccctacagattctcaacatgaagaacaacagaatatctggctgggac
aatgtattattcaagcacactaccgcgatgaagaatcttgacctcagttacaataccatt
tccttggttaattcgtcgtcacttgaagacctctccagtaataacaattttcaaatgctc
aatctcagcaacaatccgtttgcatgtacatgtgacctccgctggttcagagattgggtg
aatcaaacgagggtaacagttgcgaacgtcgagaagtatatctgcaacagtccaatcgag
tggaagggaaggcatttcttgtcgtttgatcggacgaaaataaactgcatatggtttaat
ctgtattttgtgactggagtctctattgcttctgcgcttgttgtcttgatcatttgtgtt
gtgatgtacaagaaaagatggtggatcctgtataaatgttaccgtctgaattcttggtgt
tgcgcatcccgcaacaccaaagaagggtaccaggcgataaatggtgtaaatggagatgga
tggaccttcgacgcctatatatcttacgcagaagacgactacagatgggttgttaatcac
ctcctccctgatattgattcgggtgaactagatagaccattcaacggacagttcagatta
ttcttcagtgaccgagactctgtgccggggagcagcgtgatttccagcatatctgacaat
atggagattagcaaaaaagtcatcattgtcctgaccaaaaagtatctgtccaatgcacaa
cacaaatttgaaattgatcttgccgtgcagttgaaattcgaaggcatcatcaatgatatc
atagtggtcaatgtagaaggcgtacctttcatgcgaattcctcaatcactgcaaaggaaa
gtctcgagagaagagtttttgatgtgggagaatgaagagaatgcaagaaatgtttttaag
gatcaactgaaacgagaactgagtaaggttgtgaaggctacggaagtcgtagtgtga
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