Ostrea edulis (European flat oyster): 125646500
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Entry
125646500 CDS
T09123
Name
(RefSeq) zinc phosphodiesterase ELAC protein 1-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oed03016
]
125646500
Enzymes [BR:
oed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
125646500
Transfer RNA biogenesis [BR:
oed03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
125646500
Prokaryotic type
125646500
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
DUF3941
Motif
Other DBs
NCBI-GeneID:
125646500
NCBI-ProteinID:
XP_048728784
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Position
6:47312094..47326636
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AA seq
424 aa
AA seq
DB search
MAKISSSTMEITFLGTGSAYPSPSRGASCVILKMDDGSWMFDCGEGSQIQLQKSKVKAGK
VNKIFISHLHGDHMFGLPGLLCTISGNNQRSEPLEIYGPVGLRKFIRTSLELSRTILGFT
YLVHEMKVLPCQIPSDIQKWKINELCDSNNLHPNERKGRLIEADQDKVWTLYSSEKITVK
AVYLKHRIPSFGFCVQEASCPGKLDLSKLTLQGVKPGPWCKEVKDGKVVTLPDGRKIDPA
DVVGPPKPGRKLVILGDTCNSSEIYTVGTDADVVVHEATLQNSLKDMALEKGHSTPEMAA
EVASDLKARLLILTHFSQRYLPVSEEYEEEETVSILLKEAVEIMGPNRVIAAEDFLTVTI
PLRSAPTKNDAEGSAPNLAIFKQSSALKRDHAENSDSVKKNVEQCDRTYSEKTNVKRLKV
EGST
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaataagcagctccacaatggaaattaccttccttgggacaggatctgcttat
ccttcaccgtcacgcggggcttcatgtgtcatcctcaaaatggatgatgggtcctggatg
tttgactgtggtgaagggtctcagatacagcttcaaaagagcaaagtcaaggccggaaaa
gtcaataagatatttatatcccatctccatggagatcatatgtttgggttaccagggcta
ctgtgtaccatcagtggaaacaaccagagatctgagccactagaaatctatggaccagtg
gggctacgcaagtttataagaaccagtttagagctgtctagaactatactgggctttact
taccttgttcatgaaatgaaagtgttgccatgccagatacctagtgatattcagaaatgg
aagataaacgagttgtgtgattcgaataatctgcacccaaatgaaaggaaaggtcgactt
attgaggcagatcaagataaagtctggacactgtatagcagtgagaaaataacggtgaag
gctgtttacctgaaacatagaattccttcttttggtttttgtgtacaggaagcttcttgt
ccaggaaaacttgacctttctaaactcaccttgcaaggagtaaagcctggtccatggtgt
aaagaagttaaagatggaaaagttgtgacacttcctgatggaagaaagatagaccctgct
gatgtagtggggccccctaagcctggacgcaaactggtgattctaggggacacttgtaac
tcttcggagatctacactgtgggcacagatgctgatgttgttgtccatgaagcaactctt
cagaattctctgaaagacatggccctagagaaaggtcactccacaccagaaatggctgca
gaggttgctagtgacctgaaggcacggctgttgattctgacccatttcagtcagagatac
cttcccgtgtcagaggagtatgaggaggaagaaacagtatccattctactaaaggaagca
gtggaaataatgggaccaaacagagtgatagcagcagaagattttctcactgtcacaatt
cctttacgatctgctccaacaaaaaatgatgcagaagggagcgcaccaaacctagcaata
ttcaaacagtcatccgctctcaagagagatcatgcggaaaattcggactcggtgaaaaaa
aatgtagaacagtgtgacagaacttattcagagaaaacaaatgtcaaaaggttaaaggta
gaagggtcaacatga
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