Ostrea edulis (European flat oyster): 125646789
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Entry
125646789 CDS
T09123
Name
(RefSeq) DDB1- and CUL4-associated factor 7
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125646789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125646789
03036 Chromosome and associated proteins [BR:
oed03036
]
125646789
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125646789
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
125646789
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
MIOS_WD40
Beta-prop_EML_2
WD40_RFWD3
WDR55
WD40_Gbeta
EIF3I
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
125646789
NCBI-ProteinID:
XP_055997637
LinkDB
All DBs
Position
6:15209478..15227238
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AA seq
348 aa
AA seq
DB search
MCALPGPGGQVKRKEIYKYEAPWTVYSMNWSIRPDKRFRLALGSFVEEYNNKVQIVALDE
ETSEFTSKSTFDHPYPTTKIMWIPDAKGGYPDLLATSGDYLRVWRVNDNESRLECLLNNN
KNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVLGRVNVVSGHVKTQLIAHD
KEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDAQHHPLLRLCWNKQDP
NYLATMAMDAMEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIW
DIQSMPRAIEDPILAYTSAGEINQIQWSSTQPDWIAICYNNCLEILRV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctctacctggtccaggcggccaagtgaagcggaaggaaatatacaagtacgag
gcaccatggacagtttacagcatgaactggagtattcgcccagacaagcggttccgacta
gctctcggcagctttgtagaagagtacaacaacaaagtacagattgtggctcttgatgaa
gaaacctcagaatttacttcaaagagcacatttgatcatccgtatccaaccaccaaaatt
atgtggattccagatgctaaaggtggctatcctgatttattggccaccagtggagactac
ctgagagtgtggagagtcaatgacaatgaatctcgcttggagtgtctcctcaataataac
aagaactccgatttttgcgctcctctgacttcatttgattggaatgaggtggacccaaac
cttttaggaacatccagtattgacactacttgtacgatatggggcctagagacaggacag
gtgcttggtcgtgtcaatgtggtatcaggccatgtgaaaactcagctgatcgcccacgac
aaggaagtgtacgacattgcatttagtcgagctggaggtgggagggacatgtttgccagt
gtcggtgctgatggatctgttagaatgttcgacttgcgtcaccttgaacattccacaata
atctacgaggacgcccagcaccacccactattacgactttgctggaataaacaagatcct
aactatcttgctactatggccatggatgccatggaggtcatcattttggatgtgcgagtg
ccctgtaccccagtcgctcgtctgaacaatcatcgggcatgtgtgaatggcatcgcctgg
gccccccactccagctgtcatatctgcaccgctgctgatgaccatcaagcattgatctgg
gatatccagtccatgccaagagcaattgaggatcctattctggcctatacatcagcaggg
gagataaatcagattcagtggtcatccacacagccagactggattgccatttgttataat
aactgtcttgaaattttgcgtgtgtga
DBGET
integrated database retrieval system
