KEGG   Ostrea edulis (European flat oyster): 125647001
Entry
125647001         CDS       T09123                                 
Name
(RefSeq) cyclin-T2-like
  KO
K15188  cyclin T
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125647001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oed03021]
    125647001
Transcription machinery [BR:oed03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     125647001
    Brd4/P-TEFb complex
     125647001
    7SK RNP complex
     125647001
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N TFIIB
Other DBs
NCBI-GeneID: 125647001
NCBI-ProteinID: XP_048729655
LinkDB
Position
6:84879740..84907187
AA seq 863 aa
MAGERWIFTNSQLVNTPSRKCGIDSDKELTYRQQAANLIQDMGQKLQVNQLCINTAIVYM
HRFYMFHSFKAFHRNSMAAASLFLAAKVEEQPRKLEHVIKTLHKCLNQDTLDINSDTYME
QTHQLVTNENILLQTLGFDLSIEHPHTNVVKTCQLVKAPKDLAQTSYFLATNSLHLTTLC
LQYKPTVVSCVCVELACKWSNWEIPTSNQGRPWYYYVDQSVTPELLTELTQDFLNILDKC
PSKLKKRIMTWKSGEKEKKEKDEVSVPQKSRGTLLPSAAVGSVSQLGKSSKPHQHSHSSH
DKSQSKYPSVDISKSEQKVRTIKTETTSQTTVHSHGKNVFDAISNDSKSQHGDVRESLLA
SLSQSTSDTSTPSIQKTSLAEYKERKERERQAALSKSASSLPNMDKKHMLNKDFSHRSVS
SLESDSAKKMHAFETEKAKRSHHEKYNSSKHGADSLKGSNTKLRIKSEPGGIPDLQLHNF
DSRIKTEVNMDANMIADLSRVPDLKPKVKKESSADKGDLYKSKVKSEPGGELRQSLESTP
KDTSLISDSSKSHDLKMRIKAEGSVSQEGSSPLKLKIKTPHLPKDKYFEKHSGTSSSHEE
QKVPPMKLSKHPSRTGSGDEHSKHGHHHKSHKSKHSHSHSSSGTNGKTDLVVRISLPKNV
GDGDKNVEKVKMESKKLHGSSPLTNSDHPSRKRPLSPTGVLENSDLQQQQRNKIQRAENM
RRSSSSLSNHSVVSMDLCDIGSDILTSDNDFISAPLSANVAVQKHIDTLSQVIDSRKAML
ASASRVNPPPPPPPLPPPLPPQPSHYPPPPPPPPVQTYQFSSASQQYGYQPVSDLSDLDF
LADDAIPPLPGECPPSKPPLPPY
NT seq 2592 nt   +upstreamnt  +downstreamnt
atggcgggggagcgatggattttcaccaattcgcaacttgtaaacacccccagccgaaaa
tgtgggatagacagcgacaaagaacttacgtatagacaacaagctgccaaccttattcaa
gacatgggccaaaaacttcaagttaatcaattatgtatcaacacagctattgtttacatg
caccgcttttacatgttccattcattcaaagcatttcatcgaaattctatggctgcggca
agtttgtttttggctgccaaggtggaggagcaaccacgcaaactggagcatgtcatcaag
acgctgcacaagtgcctcaaccaggacactctggatattaacagtgatacctacatggaa
caaactcatcaactggttactaatgaaaacatcctgctacagactttaggctttgatcta
tccattgaacatccccatacaaatgttgtgaaaacctgccagttagtgaaagcaccaaag
gacttagcccagacctcctacttcttggcaacaaacagcttacacctaactaccctctgt
ctgcagtacaaacctacagtggtgtcctgtgtatgcgtggagttggcttgtaaatggtcc
aattgggagattcctacgtccaaccaaggcaggccctggtactattatgttgaccagtct
gttacaccagaactcttaacagaactaacacaggattttctaaacattctggataaatgt
ccaagcaaactgaaaaagaggatcatgacgtggaagtctggagagaaagaaaagaaggaa
aaggatgaagtcagtgtgcctcagaaatctcgtgggacattgttaccctcagccgctgta
ggaagtgtctcgcaactgggtaaaagctcaaaacctcatcaacattctcattcaagtcat
gacaagtcacaaagcaagtacccctcagtggacatttcaaagtctgaacagaaagtcaga
acaatcaagacagaaaccacaagtcagacaacagttcactcccatggtaaaaatgtgttt
gacgccatatcaaatgactccaagtcacagcacggggatgtacgggagtcattgctagca
tctctgtctcagtcaaccagtgatacctcaacgccatctatccagaaaacctcgctcgct
gagtataaagaaaggaaggagcgagaaaggcaggcagctttaagtaaaagtgccagtagt
ctgccaaacatggacaaaaaacatatgcttaacaaggacttttcacacaggagtgtttcg
tctttagaaagtgacagcgcaaagaaaatgcatgctttcgagactgaaaaagcaaaaaga
tctcaccatgaaaagtataattcctccaaacatggtgctgattccctgaagggatccaat
acgaagttacgtataaaatcagaacctggagggataccagatttacagttacataacttt
gattccagaataaaaacagaagttaacatggatgccaacatgattgcagatttgtctcgg
gtgccagacctgaaaccgaaagttaaaaaggaaagttcagcagacaagggggacctttac
aaaagtaaagtaaaatcagaacccgggggtgaattgagacaaagccttgagagcacaccc
aaagacacttctcttatttcagattcgagtaaaagtcatgatttgaaaatgagaataaaa
gcagaaggaagtgtatcacaggagggatcctcaccgctcaaactgaaaattaaaactcct
cacctaccaaaagataaatatttcgagaaacacagtggtacctcttcatcccatgaagaa
caaaaagtgcctccaatgaaactgtctaagcatccttcccgcacagggtcgggggatgaa
cactctaagcatggtcatcaccacaaatcccacaagtcaaaacattctcactcacactct
agttcagggaccaatggcaagacagatcttgttgttcgtattagtctgccaaagaatgtg
ggggatggggacaaaaatgtggaaaaagtgaaaatggaatcgaaaaagttacatggcagt
agtccgcttactaacagtgatcacccctctaggaaaaggccattaagtcctacaggtgtt
ttagaaaacagtgatttgcagcaacagcagcgaaacaaaattcagcgtgcagaaaacatg
agacggtcctcttcaagtctctcaaatcattctgtggtcagcatggacttatgtgatatt
ggaagtgacattttgacatcggacaatgactttatatcggctcccctatcagcaaatgtc
gctgttcaaaagcacattgatacactatctcaagtcatagattccaggaaagctatgcta
gcaagtgcatctcgtgtaaacccccctccaccccctccccctttacccccacccctcccc
ccacagcccagtcactatcctcctccacctccccctcctcctgttcagacttaccagttt
tcgtcagcaagtcagcagtatggatatcaacccgtatctgatcttagtgatctggatttt
ttagctgatgatgctattccacctctcccgggtgaatgccccccttcaaaacccccactt
cctccatactaa

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