Ostrea edulis (European flat oyster): 125648404
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Entry
125648404 CDS
T09123
Name
(RefSeq) phenylalanine--tRNA ligase, mitochondrial-like isoform X1
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125648404
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oed01007
]
125648404
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oed03016
]
125648404
Enzymes [BR:
oed01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
125648404
Amino acid related enzymes [BR:
oed01007
]
Aminoacyl-tRNA synthetase
Class II (U)
125648404
Transfer RNA biogenesis [BR:
oed03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125648404
Prokaryotic type
125648404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
tRNA-synt_2
Motif
Other DBs
NCBI-GeneID:
125648404
NCBI-ProteinID:
XP_048731453
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All DBs
Position
1:61942169..61950016
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AA seq
475 aa
AA seq
DB search
MKMSMAQFSTNMAASMSRLPFDGYFLYRLTRWKRISQSALCIPTCVYERQFLQTSQNSQH
LFTKKFSTKPSSEVKSLDILGNTYITDLSTNITPKILEMIGKNLHCKHNHPLNLISRRIE
NYFNNNFRNSWRAPMFSKFDRISPVVTLTQNFDSLLVPPHHPSRDLSESYYLNSTHMLRA
HTSAHQSDLIKTGLDAFLVLGDVYRRDTVDASHYPVFHQMEGVRLFSKQELFSHVEDASK
VTFFEEGTRNSTKQERHAVETSLSLEQDLKKTLRNLANHLFGEDVEMQWVDAYFPFTHPS
WELEIKYQGEWLEVLGCGIIEQELLTAAGADSKVGWAFGLGLERLAMRLYSIPDIRLFWS
EDSKFLNQFNVDEPDTKVTFKPFSKQSPCINDVSFWVPENFSENDFYDIVRNVGGDLVES
VELFDDFVHPKTQRRSKAYHMTYCHMERSLTQSEVNDIHKNIMEEAIRQLGIQVR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtccatggctcagttttcaacaaatatggctgcgtccatgtcgaggttaccg
tttgatgggtattttttgtatagactgaccagatggaagagaatctcacaatctgccctt
tgtattcctacatgtgtatatgaaagacagtttttacagacatcacaaaattcacagcat
ttattcacaaagaaattttcaactaaacccagctctgaagtgaagtctttagatatttta
ggaaacacatatatcactgatttgtctacaaacattactcccaaaatattggaaatgatc
ggcaagaacctacactgtaagcataatcacccattaaatttgataagtagaagaattgaa
aattacttcaacaacaactttaggaatagttggcgagcaccaatgtttagtaagtttgac
cggattagtccagttgtgaccttgacccagaattttgacagtttacttgtgcctccccac
catcccagcagagatttatcggagagttactacctgaattctacgcacatgttgagagcc
cacacttcagctcaccagagtgatctgatcaagacgggattggacgccttccttgttctg
ggtgatgtgtatcgtagagacactgtagatgccagtcactatccagtgtttcatcagatg
gagggagtcaggcttttttcaaaacaagaactcttcagtcatgtagaggacgcatccaaa
gtgaccttttttgaagaaggtacaagaaattcaacaaaacaagaaagacatgcagtggaa
acatctttgtccttagaacaggatcttaaaaaaaccttgaggaatcttgcaaatcatctc
tttggagaggatgtggagatgcagtgggtagatgcttacttcccatttacacacccatcc
tgggagctggagatcaaataccagggggagtggttagaagttctggggtgtggaataata
gaacaagaacttcttacagcagctggagctgacagtaaggttggctgggcatttggactg
ggactggaacggttagccatgaggttgtacagtatacctgacatcaggctgttctggagt
gaagattccaaattcctcaaccaatttaatgttgatgaacctgacacaaaagttactttt
aagccattcagtaaacagtctccatgtatcaatgatgtgtcattctgggtacctgaaaac
ttctctgaaaatgatttttatgatattgtacgtaatgtgggtggtgatcttgtggaaagt
gtagaactttttgatgactttgtgcatcccaaaacacaacggaggagtaaggcttatcac
atgacctactgtcacatggagcgaagtttgactcaaagtgaggtcaacgacattcataag
aacatcatggaggaagctatcagacaactgggtatccaagtgcgatga
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