Ostrea edulis (European flat oyster): 125648855
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Entry
125648855 CDS
T09123
Name
(RefSeq) protein transport protein Sec23A-like isoform X1
KO
K14006
protein transport protein SEC23
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125648855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125648855
Membrane trafficking [BR:
oed04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125648855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
125648855
NCBI-ProteinID:
XP_048731813
LinkDB
All DBs
Position
5:61564713..61609006
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AA seq
791 aa
AA seq
DB search
MRVFGSTDLRYSMATYQEFIQQNEDRDGVRFSWNVWPSSRIEATRMVVPLGCLFTPLKER
PDLPPIQYDPVLCTRPTCRAILNPFCQVDYRAKVWACNFCFQRNPFPPQYAAISDQHQPA
EIIPQFSTLEYTITRATCHPPVFLIVLDTCMDEEDLQAVKESLQMSLSLLPPNALIGLIT
YGKMVQVHELGCEGCSKSYVFRGTKDLTAKQIQEMLGLQKGGATQQQRGPQQQQQLPSNR
FLQPVHKCDMNLTDLLGELQRDPWPVAQGKRPLRSTGVALSIAVGLLECTFPNTGARIML
FAGGPCTQGPGMVVDDELKNPIRKHLDIEKDNVKYMKKAMKHYEMLANRSAKNGHVVDIY
ACALDQTGLHEIKFCPRYTGGHMVMGDSFNTSLFKQTFQRVFSKDAKGEFKMGFGATVEI
KTSRELKVSGAIGPCVSLGVKGSCVSDTEMGLGGTCQWKLCGLYPNTTLAFVFEVVSQHN
APIPQGGRGYLQFITQYQHSSGQRRVRVTTLARNWADASTNIQHIAAGFDQEAAAVLMAR
TAVFRAETDDGPDVLRWLDRMLIRLCQKFGDYHKDDPNSFRFTENFSLYPQFMFHLRRSQ
FLQVFNNSPDETSYYRHMLNVEDLTQSLIMIQPILYAYSFNGTPEPVLLDTSSIQPDRIL
LMDTFFQIVLYHGETIALWRKQGYHEQPEYENFKQLLNAPVDDAQEILQTRFPMPRYIDT
EHDGSQSRFLLSRVNPSQTHNNMYGFGQQSSGMIVTSSDTYQDGGAAVLTDDVSLQVFME
HLKKLAVSSSS
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgtttggaagcactgatttacggtactcaatggctacctatcaagaattcatc
caacaaaatgaggacagagatggcgtgagattcagctggaatgtttggccatccagtcgt
atagaggccactcgaatggttgttcctctcggctgtttgtttactccactcaaagagcga
cctgaccttccaccaatccagtatgacccagttctctgtaccagaccgacatgccgagcc
atcctcaatccattttgtcaagtggactacagagctaaagtctgggcctgtaacttctgc
ttccagagaaatccgtttcctccccagtatgcagccatttcagatcagcaccaaccagct
gagatcattccacagttctctaccctggaatacacaatcacaagagcaacgtgtcatcct
ccggtattcctaattgttctggacacatgtatggatgaggaagatttgcaagctgtcaag
gaatccctacaaatgtctttgagcttgctgcccccaaatgcccttatcggtttgatcact
tatggaaaaatggtacaagttcatgagctcggctgtgaaggctgttccaaaagctatgta
ttcagaggaaccaaagatttaacagctaaacagattcaggaaatgttgggtttacaaaaa
ggtggtgcaacacagcaacaaagaggtccgcagcaacagcagcagctgccctccaacagg
tttttacaaccagttcacaagtgtgacatgaacttaactgacttgctaggggagttgcag
agagatccatggcctgtggcccagggaaagaggcctcttaggtccacaggggtagccttg
tctatagctgttggtctgttagaatgcacatttcccaatactggggcaaggatcatgctt
tttgcgggtggaccttgcacgcagggtcctggtatggttgtagacgatgagctgaaaaat
cccatcagaaaacatttggacattgaaaaagacaatgtcaagtacatgaagaaagccatg
aagcattatgaaatgttagccaatcggtctgcaaagaacggtcatgtggtggatatatat
gcctgtgcactggatcagacagggctacatgaaataaagttctgtccaagatacacagga
ggccacatggtgatgggggactccttcaatacttctctgtttaaacagacattccagagg
gtgttctccaaagatgccaagggagagttcaagatgggatttggtgccacagtagagatt
aagacatcacgagagctgaaggtttctggtgctattggaccatgtgtgtcccttggggtg
aagggatcatgtgtgtctgacacagagatgggccttgggggcacctgccagtggaaattg
tgtggtctctatcctaacaccacccttgcttttgtatttgaagttgttagtcagcacaat
gcaccaattccgcagggtgggcgaggttacctccagttcatcacacagtaccaacactct
agtggtcaacgacgggtcagggtcacaactctagccaggaattgggcagatgcaagcaca
aacattcagcacattgcagcagggtttgatcaggaggcagctgctgtattaatggctagg
acggctgtattccgtgcggagacagatgatggcccagatgttcttcgttggttggacagg
atgttgataaggctgtgtcagaagtttggtgactaccacaaggatgatcctaactcattc
cgattcacagaaaatttctccctgtacccacagttcatgtttcatttaagacggtcacag
tttttacaagtattcaacaacagtcctgatgaaacctcatactacagacacatgttgaat
gttgaggatctcactcagtctctgatcatgattcagccaattctgtatgcctactcattt
aatggaactccggaacctgttctcctggacaccagtagtatacagccagaccgcatcctc
cttatggacacgttcttccagattgtattatatcatggggagacaatcgctctgtggcga
aaacaggggtatcatgaacaacctgaatatgagaatttcaaacagcttctgaatgctcca
gtggatgatgcccaggaaatcctacagacgagattcccaatgccgcgatatattgacaca
gaacatgatggctcacaatctcgattcttactgtcccgagttaatccatcacagacccac
aacaacatgtatggatttggacagcagtcatctggaatgattgtaacatcatcagatacc
tatcaggatggtggtgcagcggtgctgacagatgacgttagtttgcaggtttttatggaa
cacttaaagaaattggccgtgtccagttcctcatga
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