Ostrea edulis (European flat oyster): 125648994
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Entry
125648994 CDS
T09123
Name
(RefSeq) spectrin beta chain-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04517
IgSF CAM signaling
oed04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125648994
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125648994
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oed04812
]
125648994
Cytoskeleton proteins [BR:
oed04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125648994
Intermediate filaments
Intermediate filament-binding proteins
125648994
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
125648994
NCBI-ProteinID:
XP_048732063
LinkDB
All DBs
Position
5:49181524..49226822
Genome browser
AA seq
2457 aa
AA seq
DB search
MTEIEQYSNGVRWESGMEEDFDPGSNSSKLFERSRIKALADERESVQKKTFQKWVNSHLI
RMSCRIQDLYIDLRDGKMLMKLLEILSGERLPRPTKGKMRIHCLENVDKALQFLHEQKVH
LENMGAHDIVDGSSRLTLGLIWTIILRFQIQDITVEETDNSETKSAKDALLLWCQMKTAG
YPNVNVRNFTTSWRDGLAFNALIHKHRPDLIQYDKLQKSNALYNLNNAFEVAEEKLGLTR
LLDPEDCNVEFPDEKSIITYVVTYYHYFSKMKAESVQGKRIGKVIDHALDTDKQVQDYET
FTSDLLEWIEQTIVILNDRQFANSLYGVQQQLAAFKTYRTKEKPKKFDEKGNLEVLLFTL
QSKMRANNQRPYLPKEGKLISDINKAWDRLEKAEHERELALREELIRQEKLEQLAARFDR
KAGMRETWLSENQRLVSQDNFGNDLPAVEAATKKHEAIETDINAYEERVQAVVSVCFELE
QERYHDVERITARKDNVLRLWNYLLELLKARRMRLEMSLSLQKIFQEMLYILDWMEEIKA
RLMSEDYGKHLMSVEDLLQKHSLLEADIHVLGERVKTVNTSAVKFVDGDAVEAGGYHPAD
PKVVRERMKTLEDAYEELVRLAAERRDRLEDSRKLWQFYWDMADEEGWIKEKEQLMSSPD
LGRDLTSVHLLLNKQKQMEDEMTARHTHLQSVLQVGYDLITAGNFGAEKIQERIDEINQK
WESLIDLAAFRKKRLNEAVDYYQFFADADDVDAWMFDIFRIVSSEDVGKDEASVQSLLKK
HKEVTDDLKNYESTLAALHEQAANLGEQDRESPDIQNRLGSIDRRYQELLELAKLRKQRL
LDALSLYKLFNEADGVETWIDEKEKFLTTMIITDDIEEIAIMKHRFDSFEHEMNATASKV
AVVNQLARQLLQIEHPGAAEVISRQNQLNGGWNNLRDLVDQKREEINLSHGVQNFHIECN
ETISWIHEKAKVIESTDELGNDLAGVMTLQRRLSGMERDLAAIQAKLESLQGEAEKLQDD
KPEEAQIIREKIAEINNVWMDLKDMLRERDEKLGEAGELQRFLGNLDHFQQWLSRTQTTV
ASEDIPNSLADAEKLLNQHQQLKDEIDAYAPEYAKMKEFGDKVTEGQEDPQYMFLRQRLQ
ALDSGWEELLQMWENRQQLLSQSLNLQMYLRDAKQAEVLLNQQENFLSKEEVPSSLGLLD
KQNTLEAAENLIKAHEAFITTTDANDEKINAVLQFANRLIEDQHYAADKVHKKAENISER
RDVNRQRAYEQLERLKDQLLLQQFLQECDELRDWLHDKMAAAQDETYRDAKNLHSKYLRH
QAFEREIAANKERLQRLMQSGEGLMQEKPECREQIAPILSSLQEQWDELEGTTKSKAERL
FDANRAVIYQQSCDDIDGWIGQLETQIITAEEGAKDLTTVNLLMQKQHQLESQMKIKEGQ
VAELDEQAVILRKVDPQQESMIEARKALVAERFSKIQEPLIKRREQLEKVKRIHQFVRDV
EDEKLWISEKKPLTTSNNFGNSLLSVQLLTKKNHSLQTEIENHEPRIFSVVEVGQQLIDE
KHPQSEEFQALIDELMRMWDELRAAIIQRDERLKLSDTAQQYYYDASEAEAWMSEQELYM
LGDERAKDEIGAQNFLKKHQALENTVNDYADVVRQLGERSRTLIADDHPESDQIAVRQSQ
VDKLYAGLKDLSNERKSKLEEVLKLYVLNREIDDIMQWIAEKEIVAGSHELGADFEHVCM
LQDRFREFARETESIGTERVSAANENCDALIMADHSDSAQIAEWKDNLNEAWNDLLELME
TRTQMLQSSWELHKFYHDCKDILERILEKKNYIPDDLGRDAQSVAALQRKHNNFENDLVT
LGVQVQAIQEESNRLQTGYAGDKKAEIEDREAEVVNAWKNLNLMVNSRRVTLADAHDLFK
FFSMVRDLILWMDDIIRQMKTQEKPRDVSGVDLLINNHQSLKAEIEAREENFAICINLGK
NLLERKHYRSDEVREKLIQLTTERQDMNDQWADRWEHLQLILEIYQFARDAAVAEAWLMA
QEPYLQNQDFGDTLDAVENLIKKHEAFEKSAATQDERFSALEKLTTFEIKEHKKRTEEQE
DIAKEREERRRKLIAEFLPPEKPPTPEPEVVESIQVPVQETAPETEEVQGASADVADESQ
GKSEDGSHTLPKPKRRDDSSLDDSAFSTESSEQVSESAGAPESPSGRPKPRPRPSKEESP
PSVSKVPKGKPTDSPRGKNPVRQDRSSEITREPLQGAEMARLSPLSTKDKKRTRSLSPFR
KLFSRKRDRGRSKTDVIVLQEIPSTSAESIHHEGTLTRKHDWEHENKKAHNRSWDKVYVV
LNGNFLSCYKDKKIAKQDPSVLIHHEKPISLGGAQCTKATDYTKRPHVFRLKLTNGGEYL
FHSKDDGEMDLWIQKINSVTGAEGTSVPSKSMTLPARMEGEKEGKKKKSGFLTLKKK
NT seq
7374 nt
NT seq
+upstream
nt +downstream
nt
atgacggagatagagcagtacagtaatggagtccggtgggagtccggaatggaagaggac
tttgatccaggaagtaactcctccaagctgtttgaaaggtcaaggatcaaagccttagca
gatgaaagagaatcggtacagaagaagacatttcaaaaatgggtgaactcgcacctgatt
cggatgagctgccgaatccaggacctctatatagatcttcgagatggcaagatgctcatg
aaacttttggaaattctgtctggggaaagactgcctcgtcctaccaaaggcaaaatgagg
attcactgtctggagaatgtggacaaggctttacagtttctccatgaacagaaagtgcat
ctagagaacatgggtgcccacgatattgtggatggtagctcacgtctgacgctaggtctc
atctggaccatcattcttagattccagattcaagacattacagtggaggaaacagacaac
agtgagactaaatcagctaaagacgctttgttactgtggtgccagatgaagactgcggga
tacccaaatgttaatgttcgtaacttcactactagctggagagatggcctggccttcaat
gccctcatacataaacacagacctgacttgatccagtatgacaagctacagaaatccaat
gcactgtataatcttaacaatgcttttgaagtggctgaggagaagctgggacttaccagg
cttctggatccagaggattgtaatgttgaattccctgatgagaaatccatcatcacctat
gtcgtcacatattatcattacttttccaagatgaaggcagaatctgtccagggcaagaga
attggaaaggttattgatcatgccctggatacagacaaacaggtacaggactacgaaaca
ttcacctctgacctcttggaatggattgaacagaccattgtcatcctcaatgaccgacag
tttgctaactccctctatggtgtccagcagcagttagcagccttcaaaacatacagaacc
aaggaaaaacctaaaaagtttgatgaaaaaggaaacttggaagttttattgtttaccctg
caaagtaagatgcgtgcaaataaccaaaggccctatctacccaaggagggaaaactaatc
tctgacatcaataaagcctgggacaggctggaaaaggcagaacatgagagagaattagct
ctcagagaggaacttattagacaagagaaactggagcagcttgctgcgaggtttgacagg
aaagctggcatgagagagacctggcttagtgagaatcaaagattggtttcacaggacaac
ttcggtaatgatctgcctgctgtagaggcggcaaccaaaaaacatgaagcaatcgagact
gacattaatgcatatgaagagagagtacaggctgtggtgtctgtatgttttgaattggaa
caggaacgataccatgatgtagaaagaatcactgcaaggaaagacaatgttttgaggttg
tggaactatttactggaacttttgaaagctaggcgaatgagactggaaatgtctctcagt
ctacagaagattttccaagaaatgctgtatatcttggactggatggaggaaattaaggct
cgtctgatgtctgaagactatggtaaacacttgatgagtgtagaggacttgctacaaaaa
catagtctgttggaggctgatatccatgttttgggagaacgagttaagactgtcaataca
tcggctgtgaaatttgtggatggagatgctgttgaggcaggcggatatcatccagcagat
cccaaggtggtgcgagaacgcatgaagacattggaggatgcctatgaagaacttgtccgt
ttggctgctgagagaagagacagactggaggactcccgcaaactgtggcagttctattgg
gacatggcagatgaagaaggctggatcaaagaaaaagagcagctgatgtcttcgccagac
ctggggcgagatcttaccagtgtccatcttttgctcaacaaacagaagcaaatggaggat
gaaatgactgctcgtcacacccacctgcagtcagtgctccaggtaggatatgaccttatt
acagctggaaactttggagcagagaaaatccaggaaaggatcgatgagatcaaccagaaa
tgggagagtctgattgacctggctgcctttagaaagaagagactaaatgaggctgtcgac
tactatcagttctttgctgatgctgatgatgtggatgcttggatgtttgatatcttccgt
attgtgtccagtgaagatgttggcaaagatgaggccagtgttcagtcacttctgaagaaa
cataaggaggttacagatgatcttaagaactacgaaagcactctggctgcacttcatgaa
caagctgccaaccttggagaacaggacagagaatctcctgacatacagaacagacttgga
agcattgaccgtcgttaccaggaattactggaactggccaaacttcgcaaacagagactt
ctggatgccctctctctgtacaaacttttcaatgaggctgatggagttgaaacatggata
gatgagaaggagaaattcttgaccaccatgatcataactgatgatattgaagagattgct
atcatgaagcaccgctttgacagttttgagcatgaaatgaacgccactgcctcaaaggtg
gctgttgtcaaccagctagctcgtcagttgctacagattgaacatcctggagctgctgaa
gttatcagcagacaaaaccaactcaacggaggctggaacaatttgcgtgaccttgttgac
cagaagagggaggagatcaatctgtctcatggtgttcaaaacttccatattgaatgcaat
gaaactattagctggatccatgagaaggctaaagtgattgagtctactgatgaactgggt
aatgacctggcgggagtcatgactctgcagagaagactcagtggaatggagagagatctg
gctgctattcaggctaagctggaatcattacaaggagaggcagagaaattacaggatgac
aaacctgaggaagcacagatcatcagagaaaagattgccgagatcaacaatgtctggatg
gatctcaaggatatgttaagggaaagagatgagaaacttggagaagcaggcgagttgcag
cgtttccttggaaacttggatcatttccagcaatggctctcccgtacccaaaccacagtt
gcctcggaagacattcccaacagtttggctgatgctgagaaacttctgaaccagcaccag
caactgaaggatgaaatagacgcatatgctcccgagtacgccaaaatgaaggaatttggt
gacaaagttactgaaggacaggaagacccacagtacatgttcttacgccagaggttgcaa
gctctggacagtggatgggaggagttacttcagatgtgggaaaacagacaacaattactc
tcacagagcctaaatctacagatgtacttgcgtgatgcaaaacaggcagaagttttactt
aaccagcaagaaaactttttgtcaaaggaagaagttccgtcatctctgggacttcttgat
aaacagaatacattggaagcagcagagaacttgatcaaagcccatgaggcattcattacc
accactgatgctaatgatgagaagatcaacgctgttcttcagtttgccaaccgccttatt
gaggaccaacactatgctgctgacaaagttcacaaaaaggctgaaaacatcagtgagaga
cgtgatgtgaaccgacagagagcttatgaacaactggaacgtttaaaggaccaactgctc
ttgcagcaattcttgcaggaatgtgatgagcttcgagactggctgcatgataagatggca
gcagcacaggatgaaacctatcgtgatgcgaagaacttgcacagcaagtaccttcgccat
caagctttcgaaagagaaatcgctgccaacaaagagcgtttgcagcgtctcatgcagtct
ggtgaaggattaatgcaagagaaaccagaatgtcgggaacaaattgcacctattctttcg
agtttgcaagagcagtgggatgaactggaaggaactactaagtctaaggctgagcgcttg
tttgatgcaaaccgagcagtcatctaccaacagagctgtgatgacatcgacggatggatt
ggacagctggagacacagatcatcacagctgaggagggagctaaagatctgacaactgtc
aacctgctcatgcagaaacaacaccaacttgagtctcagatgaaaatcaaagaaggacag
gtagctgagttggatgaacaagctgtcattcttaggaaggttgatccacagcaggagtcg
atgattgaagcaagaaaggcccttgtcgcagagaggttctccaagattcaggaaccactg
attaagagacgagaacaactagaaaaggtgaagagaattcatcagtttgtccgtgatgtg
gaggatgaaaagttgtggatcagtgagaagaagcccctgactacttctaataatttcgga
aatagtcttcttagtgtacaactgctgactaagaagaatcattcattgcaaacagagatc
gagaatcatgagccaaggatattcagtgttgtagaagtaggccagcagctgatagatgag
aaacaccctcagtccgaggagttccaggctctcattgacgagctgatgagaatgtgggac
gaactccgagcagcaataatccagcgagatgaaaggctcaaactgtcagacacagcacaa
cagtattattatgatgcttctgaggctgaggcctggatgagtgaacaagagctgtacatg
ctgggagatgaaagggcaaaggatgagataggggctcagaatttcctgaagaaacatcaa
gcactggagaacaccgtcaatgactatgctgatgttgtaagacagcttggagaaagaagc
aggactctaattgctgatgaccacccagagagtgaccaaatagctgtcaggcagtctcaa
gtagacaaactgtatgcaggactaaaggatttgtctaatgagagaaagagcaagttagag
gaagtacttaaactgtatgtcttgaaccgtgaaattgatgatattatgcaatggatcgca
gagaaagaaattgtggctggatcacatgaacttggtgcagactttgaacatgtctgtatg
ttacaagacaggtttagagagtttgctcgggaaaccgagagcataggaacagaacgagtg
agtgctgctaacgagaactgtgatgctttaattatggccgatcattcagactcagcccag
atcgctgaatggaaggacaatctcaatgaagcttggaatgacttgttagaattgatggag
accagaacccaaatgcttcagtcttcctgggaattgcacaaattctaccatgattgtaaa
gatattctggaaagaatactggagaagaagaactatattccagatgatctgggcagagat
gcacaaagtgttgcagctcttcaaagaaagcataacaactttgaaaatgaccttgtcaca
cttggagttcaagtccaagctatacaggaggaatcaaaccgactgcagacaggctatgct
ggtgacaagaaggcagagatcgaagaccgtgaggcagaggtggtcaatgcctggaagaat
ctgaacctcatggtcaactctaggcgtgttacactggccgatgcccatgatttgttcaaa
ttcttcagcatggtccgtgacctcattctttggatggatgacatcattagacagatgaaa
acacaagagaaaccaagggatgtttctggtgttgatttgcttatcaataaccatcaaagt
ctcaaggctgaaattgaggctagagaagaaaactttgcaatttgtatcaacctaggcaaa
aacttactggaaaggaaacattatagatctgatgaagttagagagaagcttatacagttg
accacagagagacaggacatgaatgaccagtgggcagaccgttgggaacacctacagctg
atccttgagatataccagtttgcccgagatgctgctgtggcagaagcatggctgatggct
caagaaccatacttacagaaccaagactttggggatacccttgatgctgtagaaaacctt
attaagaaacatgaagcttttgaaaagtcagctgcaacacaagatgagagattttcagca
ttagaaaagttaactacatttgaaattaaagaacacaagaaacgaacagaagaacaggag
gatattgcaaaagaaagagaagaaaggcgtaggaagttaatagcagaattcttaccacca
gaaaaaccacctactccagaaccagaggttgtagaatccatacaggtaccagtccaagag
acagctcctgagacggaggaggtgcagggagcctcagcagacgtggcggacgaatcacaa
ggaaagtcagaagatggatcacacacactacctaaacctaaacgcagagatgactcatcc
ttagatgattcagcctttagcaccgagtctagtgagcaggtctctgagagtgcaggtgca
ccagagtccccatcaggccggcctaaacccaggccacgtcctagtaaagaggagtcgcca
ccttctgtgtcaaaagtacccaagggtaagccaactgactcgcctcgtggtaaaaatcca
gtcaggcaggacagatcaagtgaaataaccagggaacccttacaaggggctgaaatggct
cgactcagtcctttgtctactaaagacaagaaacgaactcgctctctctctccatttcgg
aaactgttttctcgtaagcgtgacagaggccgtagcaaaacagatgtcattgtcctgcaa
gaaataccatctactagtgctgagtccatccaccatgaaggtacactgacaagaaaacat
gactgggaacatgaaaacaagaaagcccataatagatcttgggataaggtgtatgtagta
ctgaatggaaactttttatcttgttacaaagacaagaagatcgccaaacaggatccttca
gttttgattcaccatgaaaaacccataagcctgggaggtgcccagtgtactaaggccact
gactacaccaaacgtccacatgttttccgactgaaactcacaaatggaggagagtacctg
ttccattctaaagatgatggagaaatggacttgtggattcagaaaatcaattcggtgact
ggggcagagggcaccagtgttccctccaaatctatgactcttccagctcgcatggagggt
gagaaggagggaaagaaaaagaaatcaggcttccttacattgaagaagaaatag
DBGET
integrated database retrieval system
