Ostrea edulis (European flat oyster): 125649145
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Entry
125649145 CDS
T09123
Name
(RefSeq) toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04145
Phagosome
oed04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125649145
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125649145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125649145
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oed04054
]
125649145
04090 CD molecules [BR:
oed04090
]
125649145
00536 Glycosaminoglycan binding proteins [BR:
oed00536
]
125649145
Membrane trafficking [BR:
oed04131
]
Endocytosis
Phagocytosis
Toll-like receptors
125649145
Pattern recognition receptors [BR:
oed04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
125649145
CD molecules [BR:
oed04090
]
Proteins
125649145
Glycosaminoglycan binding proteins [BR:
oed00536
]
Hyaluronan
Cell surface receptors
125649145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_14
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
125649145
NCBI-ProteinID:
XP_056023010
LinkDB
All DBs
Position
5:3160092..3166669
Genome browser
AA seq
854 aa
AA seq
DB search
MKYSCPRLILLLLAVGSVAVQMLKTSQKHCTSNPVCLCIPTGKSTYTADCSYLGLKQVPR
TRPDVVILQLQHNNVTSLSSSFSSTLIHLDLSYNQIHNFADDVFLNLTRLTTLNLEGNKL
QLDENIYQPSVFQDLKALRLLNIKKNSIQSKNEFPSGMWRHLSSLQILKIDATPSVYFGP
EFRLLTSLTTLDVSGVTGFCNIKVIRDNFFENMPHLEVIDVSSCDLRSFAAGALTSQTNM
TVLDISYNEELTFDSFANITYDLQFSNIKVFKANKIHCSFGIGSMIKVRDIMHFRNTSLE
EVYLDDNRLALVEKHVLTYLPTSLRIVSIAKNRMVIGPYLLDIITLSGVETFDMSFQYYS
HEFRDATEVFSCHNPIRPYENVVEIMTPKQKLLSMKFSGTDNNVTITLPRNLTNVNLSRC
SIRLNIFRIVVRPSNQVSRMDVSQNIIPSFVGPVVGLNQVKYVDLSQCLCSSITPYFFDF
ASSLEILKLGSNRLGFSLKDDVNGAIFKKLVNLQELDLSDNRIQELPAKIFKNLRSIRRI
KLNSNYLTEWNVDINHMLNLSVIDLSENLLSKLSHHATQSFSNLLKRNKSSQILLGNNSF
VCTCDSVPFIQWSSKQRSHILDFHHMRCKLDNGTIVGFRDIEFVLQFLDFHCRDYKLVIF
IAISVIIVFLIVTVTGLIYRYRWKLRYLFYMTRNKFRLYSPISQDTYMFDAFISYAEEDS
AFAIHESISQLEDARGLKLCLSNRDFRPGTEIAANITEAISKSRKTIIILSNHFLNSYWC
MFEFNMARMESIYTRNGNDVMFLIMYRQVSAKTLPLSMLALVESRSYIEYPDDPRANVVF
WDKVAETCVQPARL
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaaatactcgtgtcctagactgatactcctactcctggctgttggatcagtagccgtt
cagatgttaaaaacttcccaaaaacattgcacaagcaatcctgtctgtctctgtattcca
acaggaaaaagcacatacacagcggattgttcctacctgggactgaagcaagtaccccga
acccgaccggatgtagtcattctacaactgcaacacaacaacgtcacgagtctgtcgtcc
tccttcagttccacactcattcatctcgatctctcttataaccaaattcataatttcgca
gatgatgtgttcctcaacttaacaagactaacaacactgaatctggaaggaaataaacta
caactggacgaaaacatatatcaaccatctgtcttccaagacctgaaagctttacgtcta
ctaaatataaagaagaattcaattcaatcaaaaaacgagttcccatctggaatgtggagg
cacctctcctcattgcaaatccttaaaattgatgccactccctctgtatactttggtccg
gagttccgattactgacgtcacttacaacgctagacgtctcgggtgtgacgggattttgc
aatataaaggttataagagataatttctttgaaaatatgccgcatttagaagtcatcgac
gtatcttcgtgtgatcttagaagctttgcagcaggggctctgacaagtcaaacaaacatg
acagtacttgacatttcgtacaatgaagaacttacttttgatagttttgcaaatataacg
tacgacttacagttttccaatataaaggttttcaaagccaacaaaatccattgtagtttt
ggaattggtagtatgataaaagtccgtgatattatgcactttcgaaacacgtctcttgag
gaagtttacctagatgataacagactagctttagttgagaaacacgttctaacgtacctt
ccgaccagccttagaattgtatccatagcgaaaaatagaatggtcataggtccttactta
ctggacatcataactttatcaggcgtggaaacattcgatatgtcctttcagtactactcc
catgagttccgtgatgccacagaagtgttttcttgtcacaatccaatacggccatacgag
aatgtagtggaaataatgacacccaaacaaaaattgctctccatgaagttttctggaaca
gacaacaatgtaacgataactctgccacgaaatctgaccaacgtaaacttgagtagatgc
agtatacgattaaacatttttcgcattgtcgtcaggccatccaatcaagtgtcgcgtatg
gacgtatcacagaacatcattccaagctttgtaggacctgtcgtgggccttaaccaggtg
aaatacgtggacttgtcgcagtgtctttgctcctcaattacgccatatttctttgatttc
gcaagctcattggagatcttaaaactgggttctaatcgtctcggtttcagcttaaaagat
gacgtgaacggagccatttttaaaaaacttgtaaatctgcaggagttggatctatcagat
aaccgaatacaagaattaccggccaaaatattcaaaaacttgcgaagtattcggagaatc
aaattgaattccaactatctcacagaatggaacgtagatatcaatcacatgctgaattta
agtgtaatagatctctcagaaaaccttttaagcaagctcagtcatcatgcaactcaatct
ttttcaaatcttttaaaaagaaataaatcttctcaaattttactgggaaataattctttc
gtttgtacatgtgattcagtgccattcattcagtggtcttccaaacaacgcagtcatata
ttggattttcatcacatgcgatgtaagctggataacgggacgatcgttgggtttcgagac
atagaatttgtgttacaattccttgactttcactgtagagattataagctggtcatattc
atagctatatctgttataattgtcttcctcattgtaacggttaccggtttgatttaccgg
taccgatggaaactgcgctacttgttctacatgacaaggaataagttccgattgtacagt
cctatcagtcaggacacctacatgttcgatgccttcatatcctatgcagaagaagacagt
gccttcgctatccacgagtccatttcccagctagaggacgctagggggctaaaactatgt
ctcagtaaccgagacttccggccggggacggaaattgctgccaacattacagaagccatc
agcaaaagtcgtaaaacgattataattctttctaatcattttctaaactcttattggtgc
atgttcgagtttaatatggcccgaatggagagtatctatacccgaaatggaaatgacgtc
atgtttttgataatgtatcgacaagtgtctgcaaaaacattgccattatcgatgttagcg
ttggtagaaagtcgatcatatattgaatatcctgacgatcccagggcaaacgttgttttc
tgggataaagttgcagagacctgtgtacaaccagcaagactatga
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