Ostrea edulis (European flat oyster): 125649148
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Entry
125649148 CDS
T09123
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125649148
Membrane trafficking [BR:
oed04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125649148
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_long
PPR
PPR_3
Motif
Other DBs
NCBI-GeneID:
125649148
NCBI-ProteinID:
XP_056021816
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All DBs
Position
5:complement(33451576..33509240)
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AA seq
2002 aa
AA seq
DB search
MDDRRVADYFVVAGLPDNPLPLEEFSNEAAIKPTYKQDPITDIAVIDKTLGEKVPKGYTC
LERTQSNYLADLNHGSIRCHEMFLCYRRGRDKPPLTDVGVLYEGKERLMSECEIVHTTPW
GSPANVNNGSNGRIYITYRRARETAASDTLAVVDVVIILQNKNETAPHAYHKIEKNLNRG
MVGSDVFLCYKKAMVKADILAYKPGLIQRYPEEDYENFPLPPEVPQFCLPMGSSIECWSA
KAQHPLPVFSTFVLTLANNEKVYGAAVTFYEEFEEEKLTDLQMRHLGLKNKHIREQYRIL
KTVHSNKSICLLSHWPFFDAFRKFLTYLYRISITGPHPVPIERHISHFMFDVPYPSPQRP
RILVQLNHDALSLSMPEDSPLPQSGASFVTMLKNLGPENSMSLLLFILLEYKILVHSLRP
AVLTGVAEAVAGMIFPLHWQCAYIPLCPLGLSDMLSAPVPYIVGIDSRYFDLYDPPSDVV
CVDLDTVTISLPEDRKGVNYRSLPKKPARVLQDTLHKLFDELSTRQGLGHNIDEVNLEMG
SIDTDFKRKRKEDLSLLVERKTLLELSIQEALLRFMACLLKGYKNYLKPITKAPTESTTD
PASLFDIQGFLRSRDKANLKFFQQLVKTQTFISFISERSFVSDKDASIAFFDECMEKVDE
TKDEPKLIDIDESQNSERTVFIMPPDPAGLPEGKTYSYNGFPELRSELFLRKQISNVSLN
EKPTKSTHEPLSRRTKQEIRSAQKMAHQYANDPQLWAKCLLSHCYSLWFIHLPAYIDQTK
ALHKCMKEAYDVLQKMQLAKLQPPDEMCYRVMLQLCCLYNQPVMAVKVLYQMKRANVQPN
AITYGYYNKAVFEGTWPSTRSNATILWRKLRNVIIGAAHFRRRIRRRSMSINSNSGSDYD
RISRTSIDSFLEDHTDRVNPTIMKSDIFSDSSQIGTASSKGTALASTTVREESNSTGGVS
DKGYNSMSREELKSLVHPVSNGESEQEQEKVRRDKSSGLRFTLPNSHKNKEKKENNGGNQ
DITFSEVETDFRNRVGSIVRKSLGSVSSSGSHETLKGSMMTSSQAGLLMLSQNSLDSTSF
PQEVNLQSSFNASDSKRKRHKSAGDHHAKTTRSNSVFNNWRPRHISGDPSCLARTTKDLM
LDDDAFVEETELKSRSNLEGINETTDSGVIVENSQGAGHRDERPHDLDLGNIASLPGGST
SQPFDIPQRKSLMDGSSNLLHSMGTPVTENDPLGLFKDEAPEQEEEKVVMRRKNVPTQPF
ESERLSYVRRSGDFDEDIHPEATLVMDLDDPDVVYSIREIDPSEAGIKCNRHIPEEQTAS
FRLGSGLSLDESLSTNDLYGEARPLSQMERIGKRLKDMGRTQSTPDNLDEQDRTSKSGFS
AVTSYLKSFQSPTKKSQDSLDEVGGTTSESRFSRLGSFRKRERLSGAFKSAAGALMSKVN
EIKQTISTPVKYGSNPSLGRSSDNLDGDERRGRDMPGRSLDHHRKPRNPLEEFDNLHPHP
NSSLPSSSFMEQYVPLKEFGENKSVTFASLENTLQNIAMEIEISSCFRCNRCRALLYDEE
IMAGWSADDSNLNTTCIFCQNKLVPKLQIYVKDWRGGNASSLGGSKDDDTDKHSSTTDPD
VQSSHSNHDPWVLQEKIHSTSNLENSSTDFFFGEEHLEEEGPMNVLESPERAKRDSHLAK
AALSNTTSPRSSSSLDLEGIALNSRRRCASECFTNSTDNMMYGSSFDSMEEYGGYMSSPI
RISIGEDTELPTGPDPTPEMKKDFMERCTTSVDPITVPYLSPLVLRKELDNILANEGDLS
LGSDEFLDQHPIIFWNLVWYFKRLEVPSHVPGFLLTAKSINGEEGNIGLYSSKHVLIRPQ
WDNIRIHEEVGLPMYRSWNEGRSSHTVDALITEAQPFNRAILHQIIESIMCNDLLTPIKL
VMNCRRRLRLRKSRHRSMYRDIVFLAFTSCGKENIDHDAFDREYRQAFNKLSHMEIKRTQ
RDDRPRKTRIIWCRKVFGDLEV
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaggagagttgctgactactttgttgtagcggggttaccagacaaccccctc
cccctggaagagttctcaaatgaggctgctatcaagcctacctacaagcaggaccccatc
accgatattgctgtcatcgacaagaccctgggagaaaaggtccccaaaggttacacctgc
ttagagaggacacaatccaactacctggcagacttaaatcatgggagcatcagatgtcac
gagatgtttctttgttatcggagaggaagggataaaccgccactcactgatgtcggagtg
ctgtatgagggaaaggaacggctgatgtcagagtgcgagattgtccatacgaccccatgg
ggaagtcctgctaatgtgaacaatggcagcaatgggaggatatatataacatatcgtcga
gcacgagaaacagcagccagcgacacccttgcagttgtcgatgtcgtcattatattgcag
aataagaacgagactgctccgcatgcttatcacaagattgagaaaaatttaaaccgagga
atggtgggatctgacgtcttcttgtgctacaagaaggccatggtgaaggcagatatcctg
gcttacaaaccaggattaatacagaggtaccctgaggaagactatgagaattttccattg
ccccctgaggtgccccagttttgtcttcccatgggatcttcaatagaatgttggtcagcc
aaagcccagcaccctctgcctgtcttctctacatttgtcttaaccctagctaataatgaa
aaggtttacggagcagcagtgactttctatgaggaatttgaggaagaaaaacttacggat
ttacaaatgagacatttaggattaaaaaataaacatattcgagaacaatatagaattctt
aaaactgtacattccaataagagtatatgcctgctctcccactggccattctttgatgca
tttaggaagttcttgacttacttatataggatttcaataacagggccacaccctgtccct
attgaaaggcatatatctcattttatgtttgatgttccatatccctcgccacaaagacca
agaattcttgtccagttgaaccatgatgccctttctttgtctatgccagaggactcccca
ttgcctcaaagtggtgcttccttcgtgaccatgctgaagaacctaggtcctgagaactct
atgagcctgttactgttcatcctgttggagtataagattctggttcactctctgcggcca
gcggtgttgacgggggtagcagaggcagtggctgggatgatcttccccctgcactggcag
tgtgcatacattcctctctgtccgctggggttatctgacatgttgtctgcccccgtcccg
tacatcgtagggattgattccagatatttcgatctgtacgatccgccctcagacgtcgtt
tgtgtggatctagacacggtcactatcagcctgccagaggacaggaaaggtgtaaattac
aggagcttgccaaagaagcctgcccgggtgctacaggacactctccataaactgtttgat
gaactgtccaccagacagggcctcgggcacaacattgacgaggtcaacttggagatgggc
tccatcgacacggactttaaacgcaagaggaaagaggacctttctttgctagttgaaaga
aagactctgctcgagctgtccattcaggaggctctactgagattcatggcctgtctcctg
aagggatataaaaactacctgaaacccatcacgaaggcccccacggaatccaccaccgac
cccgcctccctgtttgatatacaaggatttctacgaagcagagacaaggccaatctgaag
tttttccagcagttagtgaaaacgcagacctttatcagttttatttctgagagatcattt
gtgtcagataaagatgccagcatcgcattcttcgatgaatgcatggaaaaagtggatgaa
acaaaggatgaacctaaacttattgacatagatgaatctcagaacagtgaaagaactgtt
tttataatgcccccagacccagctggtttgccagaagggaagacgtacagctataatggt
ttccccgagttgcgttcagagttgtttttaagaaaacagatctctaatgtatcactgaat
gaaaaacctacgaaaagtacacatgaaccactatctcgcagaaccaagcaggaaatacgg
tctgcccaaaagatggcacatcaatatgcaaatgaccctcagttatgggcaaagtgtctg
ctgagccactgctacagcctttggttcatacacctgccagcgtacatcgaccagaccaag
gcgctccacaagtgtatgaaggaggcgtacgatgtgcttcagaagatgcagctggccaag
ctacagcctcctgatgagatgtgctaccgggtgatgcttcagttgtgttgtctgtacaat
cagcctgtaatggcggtcaaagtcttgtatcagatgaagagagccaacgtccagccgaac
gccattacttacggatactacaacaaggctgtgtttgaaggaacttggccctccaccaga
agcaatgccaccattctgtggagaaaactccgaaacgtcatcattggtgctgctcacttt
cggagacgtattcgacggagaagtatgtcgattaactcaaactccgggagtgattacgat
aggataagtcggacaagcattgacagttttctcgaggatcatacagatcgtgttaaccct
acaataatgaaatcggacattttcagtgattctagtcagatcggtacagctagcagtaag
gggacagcattagcgtctacgacagtcagggaggaaagcaacagcacaggtggggtgtca
gacaaaggctataactctatgtcccgagaggagctgaagtcgctcgtccatcccgtgtcc
aacggtgaatcggagcaggagcaggagaaagttcggcgagacaagagcagtggactccga
ttcacgctgcccaactcgcacaaaaacaaggagaaaaaggaaaataatggtggaaatcag
gacatcacattttctgaggtggagacagactttagaaacagggttggaagcattgtgcgg
aaatccctgggtagtgtcagcagctcgggaagtcatgaaacgctcaaaggaagtatgatg
acaagctcgcaggctgggctgttgatgttaagtcagaactctctcgattccacgtcattt
cctcaggaagttaatcttcagtccagttttaatgcgagtgacagcaaaaggaaacgccac
aaaagtgccggtgaccaccatgcgaaaaccacgcggtcgaacagtgtgttcaataactgg
cggccgcggcacattagcggtgatccaagctgcttggcgaggactacaaaagatttgatg
ttggatgatgatgcatttgttgaggagacagaattaaaatccagatcaaatttggagggg
ataaatgaaacaactgacagtggagtgattgtggagaattcccaaggtgctggtcaccgt
gacgagagaccacatgatctggatctgggaaatattgcttcccttcctggtggatccacg
tcccagccatttgatattccgcagagaaaaagtttgatggatggatcaagtaatctatta
cattccatgggtactccagtcactgagaatgatccgctggggttgttcaaggatgaagct
ccggagcaggaggaagagaaagtggttatgaggcggaaaaatgttccaactcaacctttc
gaatcggagaggttgagttatgttcgtcgaagtggtgattttgatgaggatatacatcct
gaagctacgctggtgatggatctggacgatcctgatgtggtgtattctattagagaaata
gaccccagtgaagcagggattaagtgcaataggcatattccggaggagcagacggcctcc
ttcaggcttggttcaggattaagtcttgatgaatcgctatcaacaaatgatttgtatggg
gaggcaagacctttatctcaaatggagaggattggaaaacgtttgaaggacatgggtaga
acacagagtaccccagataatctggatgagcaggatcgaactagtaaatctggatttagt
gctgttacaagttatcttaagtctttccaatccccaactaagaaatcacaggactctctt
gatgaagttggtggaacaacttcagaatccaggttctcaagacttggaagctttcggaaa
agggaacgattaagtggtgctttcaaatctgcagcaggtgctctgatgagcaaagtgaat
gaaataaaacagaccatttctacgccagttaagtacggttctaatccgtcactaggaaga
tcaagtgataatttggatggtgatgaaagaagagggcgagatatgccaggaagatcccta
gatcaccacaggaaacccagaaatcctttagaagaattcgacaacttacatcctcatcca
aatagtagtttaccatcttcttcttttatggagcagtatgttcctctcaaggaatttggt
gaaaacaaatctgtcacatttgccagtctagaaaacacattacaaaacattgccatggaa
attgaaattagtagctgtttccgatgtaatagatgtcgagctcttttgtacgatgaggaa
attatggcgggctggtcagctgatgattcaaatctaaacacgacatgcatattctgccag
aataaactagtgccaaaactacagatttatgtaaaggactggcgagggggtaacgcctcc
tccctggggggaagtaaagatgatgacacagacaaacactccagcacaaccgatcctgat
gtacaatctagtcactcaaaccacgatccctgggtccttcaggagaagatccactccacc
tccaacctagagaattccagtacagactttttctttggggaggagcacttagaggaagaa
ggtccaatgaacgtgctcgaatccccagagagggcaaagcgagacagtcatctggccaaa
gcagccctctccaacaccaccagtcccagatcctccagttctttagacttggaaggaatt
gctctgaattctcggagacgctgtgcaagtgaatgtttcacgaattccacagacaacatg
atgtatggatcctcttttgactccatggaggagtacgggggatatatgtcttctcctatt
cgtatttcgattggagaagacacagagttgcccactgggccggatccaacccctgaaatg
aagaaagactttatggagaggtgtacaacatcggtagatcccatcacggtcccttactta
tctcccctggtgctgcggaaggagctggataatattttggctaatgaaggagatctatcc
ttgggctcggatgaattccttgatcagcatcctattatattttggaacttggtgtggtat
ttcaagagactggaggtgcccagccatgtaccagggtttctgctgactgccaagtcaatc
aatggagaggagggaaatatcggactatatagtagtaaacatgttttgatccgaccccag
tgggacaacatccggatccacgaggaagtgggtctccctatgtacaggtcctggaatgaa
ggtcgaagttcccacacagtagatgccttgattacagaggctcaaccatttaacagggca
attctccaccagatcatagagagcattatgtgtaatgacctcttgacccctatcaaacta
gttatgaactgtcgtcgaaggcttcgcttgagaaagagtcgtcacagaagcatgtacaga
gacattgtattcctggcatttacatcttgtggaaaggaaaacattgatcatgatgcattt
gatcgagaataccgacaagcttttaacaaattgtcacatatggaaatcaaacgcactcag
cgagacgaccgcccaagaaagactcggatcatctggtgcaggaaagtgtttggggattta
gaggtgtaa
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integrated database retrieval system
