KEGG   Ostrea edulis (European flat oyster): 125649169
Entry
125649169         CDS       T09123                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF8-like
  KO
K10667  E3 ubiquitin-protein ligase RNF8 [EC:2.3.2.27]
Organism
oed  Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:oed00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oed04121]
    125649169
   03400 DNA repair and recombination proteins [BR:oed03400]
    125649169
Enzymes [BR:oed01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     125649169
Ubiquitin system [BR:oed04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    125649169
DNA repair and recombination proteins [BR:oed03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     125649169
SSDB
Motif
Pfam: FHA zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_2 Yop-YscD_cpl zf-RING_UBOX zf-RING_5 zf-rbx1 Baculo_IE-1 zf-C3HC4_4 zf-RING_10 zf-RING_6 LPP zf-ANAPC11 zf-CCHC_5 RING_XB3-XBAT31
Other DBs
NCBI-GeneID: 125649169
NCBI-ProteinID: XP_056020387
LinkDB
Position
5:complement(21553683..21572257)
AA seq 621 aa
MTQESYTVGLIRVGDNVKKYKLIDFREKNEVTIGRSQDATFCILSTMISRCHAVFKKEGD
TWSIRDNKSLNGVFINGKRLEPHKPYILDDTDKVQLGVPKDGEQTAEFIFTFHYKIKVKR
ARPKSADEPDCSKSTQNSRDQCPLKRMKLNSHENNMNEKPSCSKGNIYKKPLPFDDYKDK
LTKQQGVADVKLNEFELKLAEMQKVLREKEEEHEEMRRRLEAEKQERENQTLQMKEKLKE
KEVQLENQTSELREMLKEKEEELNSELQKREEDERKMKEDLENQLMSREAELLEQLQSQK
DALVIEKQKVEGDLQKAMERAIEEKNKELEEQLHKEKERLEKVITQKETEQKMLEAQLQA
TKQENNQQSEAILQTRQDILTNFSDLIETELQCSICNELYIQATSLNCSHSFCALCIAEW
MKVKKECPICRAPVTSQMKSIALDNYIDTMVEHLSEELKTRRKHLVTTRKEEQAKIEKAK
QEAARANDRGGRQGRGRGRRRGGRGQGGRGQGERGQGGRGQGGRVQRQAPNTTENREGHR
PIIIESDEETDTGNVVVGVVEEEVEMEDLSDDSSSDSDAHFYSDLSDEDAIDGEPGAYYG
GYGHCYRCGHRGHWANGCPYR
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgacacaagagagttatacagttggactcataagagttggtgacaatgttaaaaagtac
aaactcattgatttccgggaaaaaaatgaggttacaatcggaagatcacaggatgccacg
ttttgcattttatccaccatgatctcacgctgtcatgcagtgtttaaaaaggagggagat
acttggagcatcagagataacaagagccttaatggggtattcataaacggaaaaagacta
gaaccacacaaaccttacattttagatgacactgataaagttcagctcggagttccgaaa
gatggtgagcaaacagccgagtttatttttacgtttcattacaagatcaaagtgaaacga
gcaagaccaaagagtgctgatgaaccagactgctcaaaaagcacacagaatagtagagat
caatgtccattgaaaagaatgaaattgaactctcatgaaaacaatatgaatgaaaaacca
tcatgctctaagggaaacatttacaaaaagccactaccatttgatgattacaaggacaag
ctaaccaaacaacagggagtagctgatgtgaaattaaatgaatttgaattaaaacttgct
gagatgcagaaagtgctgagagaaaaggaggaagaacatgaagagatgaggaggcgatta
gaggcagagaaacaggaacgagaaaaccagacgttacagatgaaggagaagctaaaggaa
aaagaagttcagctggaaaaccagacaagtgaattgagagagatgctgaaagaaaaggaa
gaggaattaaattcggaattacagaaacgagaggaagatgagagaaaaatgaaggaggat
ctggagaaccagctaatgagcagagaggccgaacttttggagcaacttcagtcacagaaa
gacgccctcgttattgaaaaacagaaagtggagggtgatttacaaaaagccatggagagg
gcaatagaggagaagaataaagaactggaggagcagcttcacaaagaaaaggaaaggctt
gagaaggttattactcagaaggaaacagaacagaaaatgctggaagcccagctacaagcc
acaaaacaagagaataaccaacagtctgaggccattctccagacacgtcaggacatccta
accaacttctctgacctgatagagaccgagctgcagtgtagtatttgtaatgagttgtat
atacaggcgacatctctgaactgttcccattctttttgtgctctgtgtattgctgagtgg
atgaaagtgaagaaggaatgtccaatctgtagagcgccagtcacctcccaaatgaaatcc
attgctcttgataattatattgacacaatggtggaacacctcagtgaagagctaaaaacc
agaagaaaacacctggtgactaccagaaaagaggaacaggcaaagatagaaaaagctaaa
caagaagcagcaagagccaatgacagaggaggcagacagggaagggggaggggccgaaga
agaggtgggcggggtcaaggtgggcggggtcaaggtgagcggggccaaggtgggcggggt
caaggtgggagggtacagcgtcaggccccaaacacaacagaaaacagagagggtcatcgt
ccaatcataatcgagagcgatgaagagacagacactgggaatgtggtggttggtgtggtg
gaagaggaagtggaaatggaggatttgagtgacgatagtagcagtgacagtgatgcccat
ttctacagtgatctctcagatgaagatgcaattgatggagaacctggagcatattatgga
ggatatgggcattgttacagatgtggtcacaggggacactgggccaatggatgtccatat
aggtag

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