Ostrea edulis (European flat oyster): 125649985 Help Entry 125649985         CDS       T09123                                  Name (RefSeq) focadhesin-like isoform X1   KO K27498   focadhesin Organism oed  Ostrea edulis (European flat oyster) Brite KEGG Orthology (KO) [BR:oed00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oed03019]     125649985 Messenger RNA biogenesis [BR:oed03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      125649985 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Focadhesin DUF3730 HEAT_2 Motif Other DBs NCBI-GeneID:  125649985 NCBI-ProteinID:  XP_048733858 LinkDB All DBs Position 5:complement(7872300..8065323) Genome browser AA seq 1788 aa AA seqDB search MEELSRRLEFDNVTIQIQAFKRLHDDLRKKLSLEHRLTKTSTKCAEYKLLEEKCGAMETI VVKATCTTMVELVSDGLADFSAVLESFLNQVPTAKNLCGIVRGTADLLVWQAVQMTSVST GGYSNPYTLRSPPHPFITILTNRPDSWLLLGNQVTYICSLEDERIQGLAIEILEPFLKFV FAEPQDNPKYQPMRMFLQRELLFVADQSDDCSKMKKILGFIANILSCLQVQDKNSVGRAA LFVMDTVDVCLHRVSETEAILKKLVTYLVDLCWEFHFQSLDVSMITRYLHRVADKAPNTL SCDTNLMSLSGLLLKVDMEDAVTILKPVKKVVESDTEDLCSVAVASLVLPILQILSHSGY GPGTGMVKSAISISKGILKLIEGKLVKTLCKRKQETPQFYQHLTSATFINNNYSMLARAM EEEEDLPGLWLKNLVDSVLRLKSVPLQLTVTVAALFVLSSGKPWADQSLKALQTISHMDH KQAYYFLPLYMYKLNKNINPEYQLSIMRAIPSIAQHKICIPTVLRTIQTFGYVSRLQALS ICLLSELWSLQDRCFPYLLESITKSTEVVLTKEGVDEVKLAKAKAIRDVCLLRGEQHGSD VLSPLSDLLESSTQEVDSPVASLALEGLYYLCKAEVVDILSVWSVLGEKLSEDPRSIVQG RICQLFSLLPELQVKTEEFEECQQYAVSALWLFVHGSNPSVSVAAFRALSKFDISSFNLS HMPDKVKVDFVRHAEAIIARGDNPDLTVQDIIRDVPGVCYIRLLDAISPESYIGYEDFLC EHVGSEVKKFRRGIYHTSARQLGAASNQSKAVASIPSFLQQQYDRCKHPGLLPGLAAGLL FSFDPPVEVGRDGRPRKHYSITHSKNFQHMFTTLLHEVLIQPSDWQAMLHIPLAWGAFID RLYTAVTEGRKAEIDLQLKKDHIGEEEAVEKKKVAWLWVRDKLTEAIKNASKESPSVQGN AVLALGGLVLTSQKHWISLDKKSQSEIEQVKEFQSQTHWTTVAMDTLMSLMDVTFQPKGN ILGICQQRSVDDRMTSSFLVQAASVLALCQLTPVIINLDMSRIFVMLETLTTWLPGQPDA PEAPVLQLAYGLGLGGVLGKLFEENFMDSCSSKEVTQIWQTLDKLEDVCLAGGEEGCGSL LGLGVAVTALCNNTRTEARAHVLTVLDKLQAKLQTTKPDNLVHQVLCVSLALINSSAFNA NIIASDRVLSAVGKVSADQNEAPQSVELAMAVGILMYHLTKAGVSGMVDQQQHLLHTWTK NITCKESSPLLRMAAMSGLMALIGSQKTLISNTGSMSMSLGGMDADDVVKVMTQMISTGD DLGIQKTAAWMLGNYYLSASSVAETRVNVPISLKYLPESSLLRAVVDFLIEAGKKGPEAI PETRVKCCLRSLVEKVSQTLPPVNWAGILAPLMRVNFSDEVKRLCLQLAITQSFYSPTAA ILVSSWMVSPLLQTLNDSCRGLLYVELPTLVTSVSPATLTSLLDMMQKEKGDLYLHGLYG LHRALKIRDLPSAVTDILLQCLKSVYKRTVGEQTDYRVHHLLGECLGSVPDAVFDDLTEG DFSDADDHFLCCFVRCYLVVQGRQPMALLNRCVDASLNNPDSITSELHALFYHTFWHIAQ SQAESNGTLHRLQWLLELLGHIRNVSTGAITLSDKVTNTDQMVQFGIHLAASVISMFTSS STALVYNINPQFLMDSYPNSPFQEGHNLTLSRCPGSPVNFLPSFITGLEGEPWSQILLKV LDWMGLMQKKQTPAALSAVEISLKHSVHFRRVQTWTDVIQRYNTISEM NT seq 5367 nt NT seq  +upstreamnt  +downstreamnt atggaagaattaagccgccgcctggagtttgacaatgtgaccatacagatacaggctttc aaaaggcttcatgatgaccttaggaaaaagttgtctttggaacacagactgacaaagacg tcgaccaagtgtgcagaatacaaactattagaagaaaaatgtggtgctatggagacgatt gttgtcaaggcaacatgtacaacaatggtggaactagtgagtgatggattggcagacttc tcggctgttcttgaatcctttctcaatcaagtgccaactgcaaagaacttgtgtggaatt gtgcggggaactgcggatttgcttgtgtggcaggccgtgcagatgaccagcgtctccact gggggatacagcaacccatacactctgagatctccccctcacccgtttataacgattctg accaatcgaccagactcctggttactcctaggcaaccaagtgacatacatctgcagtttg gaagatgaaagaattcaaggtctagccattgaaatcttggaaccattcttgaagtttgtt tttgctgaaccacaagacaatccgaagtatcaaccaatgagaatgttcctacagagggag ctgctctttgtagcagaccaatcagatgactgcagtaaaatgaaaaaaatcctaggattt attgcaaacattctatcttgtctccaggtccaggacaaaaattccgtggggagagctgct ctgtttgtaatggacactgtggatgtttgtttacaccgggtctcggaaactgaagcaata ctaaaaaaactggtgacctacttagtggatttgtgctgggagtttcactttcagtctctg gatgtctcaatgattacacgatacctccacagagtggcagacaaagccccaaacactctg tcatgtgacacgaacttaatgtccctgagtggtcttctcctgaaggttgacatggaggat gctgttaccatacttaaaccggtaaaaaaggttgtggagtctgacactgaagatctgtgt tctgtagcagtggcctcccttgttttacccattctacagatcctgtctcattcgggttat ggtcctgggacagggatggttaaatctgcaatctcaatatccaagggcatcttaaagctt attgaaggaaagctagtaaagacactctgcaagaggaaacaggaaacacctcaattctat caacacctgacctctgcaacttttatcaataacaactactccatgctggcccgggctatg gaggaggaggaggacttgcccgggctatggttaaagaatcttgtggattctgtgctgaga ctgaaatctgttccactccagcttaccgtaaccgtggcagcactgtttgtgttgtcatca gggaaaccatgggctgaccaatcactgaaggccttacagacaatctcccacatggatcat aaacaggcatattactttctacctctgtatatgtacaaactaaacaagaatatcaatcca gaatatcaactcagcatcatgagagctatcccaagcatagcacaacataagatatgcatt cccactgtactgaggaccattcagacttttgggtatgtctcccgtctgcaggccctgtcc atatgcttgctatctgaactctggtcactgcaggacaggtgctttccatacttactggag tctatcacaaagtcaacagaagttgtgctgaccaaagaaggggttgatgaggttaagcta gccaaagccaaggcaattcgtgatgtctgtctgttgaggggtgagcagcatgggagtgat gtgttatctcctttgtccgatttactagagagctccacacaggaagtagattcaccagtt gcctcccttgctttggaaggactgtattacctgtgtaaagctgaggttgttgacatttta tcagtttggtcagtgttaggagagaaactctctgaagaccccagatcaatcgtacaaggc cggatttgccagctgttctctctgctcccagaactccaagtgaaaacagaagaatttgag gagtgtcagcaatatgcagtttcggccctctggctctttgtccatggcagtaacccgtca gtcagtgtagcagctttcagggcgctgtctaaatttgatatctcaagcttcaacctgtcc cacatgccagacaaggtgaaagtcgatttcgtaaggcatgcagaagccattatagccagg ggagataacccagatctgactgtgcaggacattataagggacgtcccaggtgtctgttat attcgtctccttgatgctatctcacctgagagttatataggatatgaagacttcttgtgt gaacatgtggggtcagaggtcaagaaatttcgtcgtggaatataccatacatcagcacgg caactaggagcggcatccaatcagagtaaagcagtggcctccataccgtcatttcttcag cagcagtatgacagatgtaaacacccgggcttgttgcccgggctagcagcgggacttcta ttcagttttgatccgcctgtagaggttggcagagatggacgcccaagaaaacactactcc attacccacagtaaaaactttcagcacatgtttaccaccctgttacacgaggttttaatc cagccgtctgactggcaggcaatgctgcacatcccgctggcctggggggcattcattgac aggctgtatactgccgtcacggagggccgaaaagcagagattgatcttcaattgaaaaaa gatcacattggagaggaggaggctgtagagaaaaagaaagtagcatggctctgggtccga gacaagctgacagaggccataaagaatgcatcgaaagagagccccagtgttcagggaaat gctgtgctggcgttgggaggcctcgtattgacttcacagaaacattggatcagcctggac aagaaaagtcagagcgagattgagcaggtcaaggagttccagagccagacgcactggacg actgttgccatggataccctgatgtctctgatggatgtaacttttcaaccgaagggcaac atcctgggaatctgtcaacagaggtctgttgatgaccggatgaccagcagttttctggtc caggctgcctcagttttggctctctgccagctcacaccagttattattaacctagatatg agcaggatctttgtgatgctggagacccttacaacatggttaccagggcaaccggatgcg ccggaagctcccgtcttacagctggcctacggtcttggtctgggaggagttcttgggaaa ctgtttgaggagaacttcatggattcctgcagttcaaaggaagttacacagatatggcaa actctggacaagttagaagatgtttgtctggcaggaggagaggaaggctgtggaagtctc ctaggactaggcgtggctgtgaccgccctttgtaacaacactagaactgaggcgagggca catgtcctcaccgtgctagacaaactgcaagctaagctacagacaacaaagccagacaac ctggtacatcaggtgctctgtgtgtctttggcactgattaacagttcagcatttaacgcc aacatcatagcatctgacagagtcctgtctgctgtaggcaaggtctccgctgatcaaaac gaggctccacagagtgtggaattagccatggctgtagggattttgatgtatcatctgaca aaggcaggagtctcgggaatggtggaccagcaacaacatttgctacacacctggacaaag aacataacctgcaaggagagttcacctttgttgcgcatggctgccatgagtggactaatg gctttaatcggttcccagaaaactcttatttctaacactggaagcatgtcgatgtccttg ggtggtatggatgctgacgatgttgtcaaggtgatgactcagatgatttccaccggtgat gaccttggaattcagaaaacagcagcctggatgttggggaactattatctttctgcgtct tcagtggcagagaccagagttaacgtgcctatctccctgaaatatctcccagaatccagt ctgttacgagcagtggtagactttctcattgaggcaggcaagaaaggacctgaagctatt ccagagacccgggtgaagtgctgcctcagaagtctagtggaaaaagtcagtcaaaccctg ccccctgtcaactgggctggtatcctcgcccccttaatgagagtcaatttcagtgacgaa gtgaagaggttatgtcttcaattagccattacccagagtttctattcccctacagcagcc attttggttagttcgtggatggtttctcctctcctgcagactctcaatgattcctgtcgt ggcttgctctatgttgaattacctacactggtgacctctgtgtcccctgcgaccttgact tcactccttgacatgatgcagaaggaaaagggtgatttgtatctccatggtttgtacgga cttcacagggcactgaagattcgtgaccttccttctgctgttacagacattttgttacag tgtttgaaatcggtctacaaaagaacagtgggagagcagactgattatcgagttcatcat ctgttaggggaatgtctcggaagtgttccagacgctgtgtttgatgacctgacagagggg gatttttctgatgcggatgaccacttcctgtgctgttttgtgagatgttatctggtggtc cagggacggcaaccaatggccttgctgaaccgctgtgtggatgccagccttaacaatcca gacagcatcacgtcagagctgcatgctttgttttatcacacattctggcacatcgcccaa tctcaagcagagtccaatggcaccttacatcggcttcagtggctcttagagttactgggt cacattcgaaatgtgtcaacaggagccataactctgtcagacaaagtcacaaatacagat cagatggtacagtttgggatccatctggctgcctctgtcatcagtatgtttacctcgtcc tccacagctttagtctacaatataaatccacagttcctgatggactcctatcccaatagt cctttccaggaaggtcataacctgaccttgagcaggtgccctgggagtcctgtcaatttc ttaccttcgtttattactgggcttgagggagaaccctggagtcagatcttactcaaggtt cttgactggatgggtttgatgcagaagaaacagaccccagctgctctgtctgctgttgag atcagcctgaagcattcagtgcactttaggagggtgcagacatggacagatgttattcag agatacaacacaatctcagagatgtag

DBGET integrated database retrieval system