Ostrea edulis (European flat oyster): 125649990
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Entry
125649990 CDS
T09123
Name
(RefSeq) denticleless protein homolog isoform X2
KO
K11790
denticleless
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125649990
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125649990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_Vps41
PHC2_SAM_assoc
CLN5
Motif
Other DBs
NCBI-GeneID:
125649990
NCBI-ProteinID:
XP_048733869
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Position
5:7520782..7547803
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AA seq
700 aa
AA seq
DB search
MISKQLQNRALGCPARLDLSNVLESFECLSTDEYLGEDDGTLVPPLACEFCKVKSRGHIL
AVVDENGFIVIYNTKKTGQLAIMDDWQAHNNAVFDMTWMEYEEKILTASGDQTVVLWDAG
KQEKIDVFRGHTSSVRSVCTQRGGSAVFATGSRDGHIMIWDTRCNPKDGHISPVNIIRNA
HSISQVAGHKNKQKRLGPSRDSQMSVTAVIFQTDMNLFSAGTVDGCIKQWDLRKNFSIST
SEAVPRGLLAYSGLSKRSHGYSNLVFDSTYSQLFVNCRDDVIYQYDVINLNSKPVHCYRG
HQNGSFFIKACLSPDDEYLLTGSSDEMAYIYKIGSPKQSPVVLKGHKLEVSDVKWCPTEF
SKIATLSDDNTMRIWRLHRRPWPADPGEVIGTSERTHREIGVSSDDLEQRIADHSLFCRL
KTTSVSEYRVTPKVSPSIKTWLSGGSKANKPQGQTMATSKNSKIKMKREDTKTGTLSKKS
IFQGNRLPCKRKLIDNDEESGSFERFNKRPKIQDSPVKGTEWKSPRKLEIKQSPRKFDSK
KQCFSDFSAHNGKNTNSVSDSLQPQRCPLAARLGPLKTNSVVKTNAFGQIESISSPTVNL
PNLVREGSVNKVNMFYKQSDKENSPQKLNWLSQIRQQRLATIGETAKGSPRRALFEKISV
SPRSKSSQSSSSSSQSSSQEEVRSPISKGMKPLHAYFQRK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgatttctaaacagttacagaaccgtgctttgggctgtccagcaagattggatttgtcg
aatgtactggaatcatttgaatgtttgagtacagatgaataccttggagaagatgatggg
actttggttcctcctcttgcatgcgagttctgtaaagtgaaatccagaggacatattctg
gcagttgttgatgagaatggttttattgttatctacaatacaaagaaaacagggcagctg
gcgataatggacgattggcaggctcacaacaatgctgtgtttgacatgacatggatggaa
tatgaagaaaaaatactgacagcgtcaggtgaccagacagtggtgttgtgggatgcagga
aagcaagagaagatagacgtgtttcggggccacacaagctcagtacgatctgtctgtaca
cagcgtggaggaagtgctgtgtttgccactggatcgagagatggtcatattatgatatgg
gacacaagatgtaatcccaaagatggacatatttccccggtaaacattattagaaatgca
cattccatttcccaagttgctgggcacaagaataaacaaaaaaggctcggtccatcaagg
gatagtcagatgtcggtgactgcagtaatttttcagacagatatgaatcttttttctgcg
ggaactgtagatggctgcattaaacagtgggacttgaggaagaacttttctatttcgact
tctgaggctgtacccaggggactgctagcctattcaggtctctccaagagaagccatggt
tattcaaatttagtgtttgattcaacatatagtcagctctttgtcaactgcagagatgat
gtgatataccagtatgatgtcatcaacttgaattccaaaccagtgcactgttacagagga
catcagaacggttccttcttcatcaaagcttgcctcagtccagatgatgagtatctcctg
actgggtcttcggatgaaatggcttatatctacaagattggcagtccgaaacaaagtcca
gtcgttctgaaaggccacaaattggaagtgtccgatgtcaaatggtgccccacggaattc
tctaagatagccaccctgtctgatgataatacaatgaggatttggcgtcttcaccgcaga
ccctggcctgcagatcccggggaggtgatagggacctcggaacggacccacagagagata
ggcgtgtcatcggatgacctagaacaaagaattgcggaccacagcttgttctgtaggctg
aaaacaacatcagtgagtgaatatcgcgttacccccaaggtgtcaccctctataaaaact
tggctttccggcggttctaaagccaataaaccccaaggacagacaatggccacttcaaag
aattctaaaataaagatgaaaagggaggatacaaagacgggtacactgagtaagaaatca
atttttcaaggaaaccgactcccgtgcaagagaaaattgattgataatgatgaagaaagt
ggatcatttgagagattcaacaagagaccgaaaattcaggacagcccagtcaaagggact
gagtggaagagtcccagaaaactggaaatcaagcagagtcccagaaagtttgattctaaa
aagcaatgtttcagtgatttttcagcccataatggcaagaacactaattctgtgagtgac
agtttgcagccacagaggtgtcccttggcagcaagactgggccctttaaagacaaattct
gttgtcaagactaatgcttttggtcagatcgagtcaatttcatcaccaactgtcaattta
ccaaacttagtgagagaaggtagtgtaaacaaagtcaacatgttttataaacaatctgac
aaagaaaacagtccccagaaactgaactggttatcacagattaggcagcagaggctagcc
actatcggtgaaacagcaaaggggtcaccaaggagggcattgttcgagaaaatctcagtg
tcaccgcgatccaaaagttcacagtcttcttcatcctcttcacagagtagcagtcaggag
gaagtacgctcaccaatctcaaagggaatgaaacctctgcatgcttacttccagagaaag
tga
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