Ostrea edulis (European flat oyster): 125650346
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Entry
125650346 CDS
T09123
Name
(RefSeq) bifunctional glutamate/proline--tRNA ligase-like isoform X1
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed00860
Porphyrin metabolism
oed00970
Aminoacyl-tRNA biosynthesis
oed01100
Metabolic pathways
oed01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
125650346
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125650346
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oed01007
]
125650346
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oed03016
]
125650346
Enzymes [BR:
oed01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
125650346
6.1.1.17 glutamate---tRNA ligase
125650346
Amino acid related enzymes [BR:
oed01007
]
Aminoacyl-tRNA synthetase
Class I (A)
125650346
Transfer RNA biogenesis [BR:
oed03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125650346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
WHEP-TRS
ProRS-C_1
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_1c_C
tRNA-synt_1c_C2
GST_C_3
GST_C
Arc1p_N_like
Peptidase_C50
Motif
Other DBs
NCBI-GeneID:
125650346
NCBI-ProteinID:
XP_048734521
LinkDB
All DBs
Position
5:34493638..34532888
Genome browser
AA seq
1613 aa
AA seq
DB search
MALSVSFQRDKIPTAAFLTAEYLSQKKLVKWSLEQNTTLTVEGTTLTNNFTICRFLANKF
PDSALYGNTILEASEIDHWMTFAADSLSCAAKFCTALSYLDKSLEPVTYMVGRSLTLADF
AVWEVLQSSSKFQSLLASDDAGVNVTRYYKFLCNQLVFKIAQNHLVKTGSNKKSDKKSDQ
SAKKDEGKFVDLPGAEIGKVVVRFPPEASGYLHIGHAKAALLNYHYREMFKGTLIMRFDD
TNPAKENEEFEQVILEDVAMLGIKYDKFSYTSDHFDLLQKHCEKMIRLGKAYVDNTDPET
MKKEREERKDSVNRNNGVEKNLAMWEEMKKGTAKGQTCAVRAKIDMKSDNGCMRDPTLYR
CKPEHHIRTGTKYKVYPTYDFACPIVDSVEDVTHALRTTEYHDRDEQYYWILDTLGLRRP
YIYEYSRLNLQNTVLSKRRLTWFVNEGIVDGWDDPRFPTVRGVLRRGMTVEGLKQFIVAQ
GSSRSVVMMEWDKIWAVNKKVIDPIVPRYTALLKEEVVPVHVKGASTGVMQKPRHPKNES
VGMKDVWYSPLVYIEGADAELLKEGELTTFINWGNLEITKINKKNGKIVSMEAKTMLDNT
DYKKTQKITWLAETDKAPFTPSICVQYDHIISKAVLGKEEDFKQYANRDSKKELVMFGDP
CLASLKKGDIIQLQRRGYYICDQPYLPTSPFTGLSSPCVLLNIPDGHTKEMPTSGSKHKE
DGSSKEKSQSKKGKAAEKSPPDTPSSSGIDLVDLDKRIRGQGERVRDLKSKKAPKEQVDA
EVKILQALKAEYKSGSGSDWKPDTKPVHPVSCPPASGSVNAGELNDRITKQGNMARDLKT
KKAPKSEIDEAVKILLALKTEFKTMTGKDWKPGSTPPAISSSGSSGDVNIINEKIIAQGN
KVRDMKAAKASKSEIDEAVKVLLALKTEYKTMTGKDWKPGSTPPVTSSFDSSGDVNINEK
IIAQGNKVRDMKAAKASKDTVTAEVQILLQLKAKYKTATGKDWTQPPAGSTPKKTEPPKV
MSADEAGNLKKKIDDQGEKVRQLKASKAAEDEVKKAVEVLLSLKSQYKDLTGEDLSGGGR
KDKKEKKKDKKVTEKKEEVKVQEDSKDHKKITRLGLEAKKEENLSDWYSQVITKAELIEY
YDVSGCYILRPWSYSIWESIKEFFDREIKKLGVENTYFPMFVSHQALEREKTHIADFAPE
VAWVTKSGKSDLAEPIAIRPTSETVMYPSYAKWIKSHRDLPLKLNQWCNVVRWEFKHPQP
FLRTREFLWQEGHTAFATAEEAQEEVYAILELYARVYEDLLAIPVVRGRKTEREKFAGGD
FTTTVEAYISASGRAIQGGTSHHLGQNFSKMFEICIQDQETLEKQFVYQNSWGLTTRTIG
VMCMVHGDNTGLVLPPNVASVQVIIVPCGITANLSKSDEQDLMDKCEALKKELLAADIRT
RTDLRDNYSPGWKFNHWELKGVPIRVELGPRDIKQNQLVAVRRDTSEKMILKRENIDKQL
ADLLKNIQDSLFNRAKLDLDSHMIVSHQWKHFCDSLDNKKIIQAPFCGDEDCEEKIKKDS
ARDAVVEEGAPAMGAKGLCIPFKQPETLKSGTKCIHPDCKRDAKFFTLFGRSY
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgagtgtgtctttccagagggataaaatcccaacagctgcctttttgacagca
gagtatttatcacagaagaagcttgtgaagtggtcactagagcagaatacaactttaaca
gtggaggggacaactttaacaaataacttcaccatttgccgatttctggccaacaagttt
cctgattcagctctctatgggaataccattctggaagcatcagagatagaccattggatg
acctttgctgctgactccctgtcctgtgctgctaaattttgcacggctctcagttacctg
gataagtctctggagcctgtgacctacatggtgggccgatcgctgaccttggcagatttt
gctgtgtgggaagtacttcagagtagtagcaagttccagtcactgctagcatctgatgat
gcaggagtcaatgtcactcgctattataagtttctctgcaatcagttggtgttcaagatt
gcacagaatcatttggtcaagactggttcaaacaagaaaagtgataaaaagtcggatcag
tcagccaagaaggatgaagggaagtttgtggatctacctggggctgagattggaaaagtt
gttgttcgtttcccaccagaagcaagtgggtatttacatattggtcatgcaaaggcagcc
ttgctgaactaccactacagagagatgttcaaaggaacgctcattatgagattcgatgac
accaacccagctaaggaaaatgaggagtttgaacaggtgattctggaggacgtggctatg
ctgggtatcaaatacgacaagttctcctatacctcagaccactttgatctgcttcagaag
cattgcgaaaaaatgattaggttgggcaaagcctatgttgacaacacagatcctgaaacc
atgaagaaagagcgagaagagcgcaaggactctgtcaacagaaacaacggtgtggagaag
aatttagccatgtgggaggaaatgaagaaaggaacagctaaaggccagacctgtgcagtg
agggcaaagattgacatgaaatctgacaatggctgtatgagggaccccacattgtataga
tgcaagcctgaacatcacattaggactggcaccaaatacaaggtgtaccccacttacgac
tttgcttgccctatagtggacagtgtagaggatgtgacccacgctcttcggaccacagag
taccatgatagagatgagcaatactactggatcctggacacactaggtttacgacgtcct
tacatctacgagtacagtaggctcaacctgcagaacactgtcctctccaaaaggagactc
acctggtttgtcaatgagggaattgtggatggatgggatgatccccggttccccaccgtg
aggggcgtgttgagaaggggaatgacagtggaggggctgaaacagttcattgtggcacag
gggtcctcgaggtctgtggtgatgatggagtgggataagatttgggcagtcaacaagaaa
gtgattgatccaattgtaccaaggtacactgctttgcttaaggaagaggttgtcccagtt
catgtgaaaggtgcatctacaggtgtgatgcaaaaaccaagacatcccaagaatgaaagt
gtaggaatgaaggatgtgtggtactctccccttgtgtacatagagggcgctgatgcagaa
ttgttgaaggagggggagctgactacatttatcaactggggtaacctggaaataactaaa
ataaacaagaaaaatggcaaaattgtgtccatggaggccaaaactatgctggataataca
gactacaagaagacccagaagattacctggctggctgagacagacaaagcccccttcacc
ccctccatatgtgttcagtatgaccacatcataagtaaagctgttcttggtaaagaggag
gacttcaaacagtatgccaacagagacagtaagaaagagttggtgatgtttggtgatcct
tgtttggccagtttgaagaaaggtgacattatacagcttcagaggcgaggatattacatc
tgcgatcagccgtatctcccaaccagccctttcactggtctcagcagtccctgtgtcctg
ttgaacatcccagacggccacacaaaagagatgccaacctctgggtccaagcacaaagaa
gatggcagcagcaaagagaaatcacagagcaagaaagggaaagcagctgagaaatctccc
cctgatacaccctcctcctcaggtattgatctggtggatctagacaagaggatcagaggt
caaggggaaagagttcgtgacctcaagtccaagaaagctcccaaggagcaagtagatgca
gaagttaaaattctccaggctctgaaggcagaatataaatctggttctggttctgactgg
aaaccggacaccaagcctgtccatccagtttcttgtccaccagcatctggttcagtaaat
gccggagaactcaatgatcgaataacaaaacagggcaacatggccagggacctcaaaaca
aagaaagcccccaagagtgaaattgatgaagcggtgaaaatacttttggctctgaagaca
gaattcaaaactatgacaggaaaagattggaaacctggttccaccccgcccgcaataagt
tcatctgggagcagtggagatgtaaacatcatcaatgagaaaattattgcccagggcaac
aaagtccgtgacatgaaagcagccaaagcttcaaagagtgaaattgatgaagcagtgaaa
gtacttctggctctgaagacagaatacaaaactatgacaggaaaagattggaaacctggt
tccaccccgcccgtaacaagttcatttgacagcagtggagatgtaaacatcaatgagaaa
attattgcccagggcaacaaagtccgtgacatgaaagcagccaaagcttcaaaggacaca
gtgactgcagaagtgcaaatattactgcagttgaaagccaagtacaaaactgctacaggg
aaggattggacacaacctcctgctggatccacccccaaaaagacagaaccacctaaagtc
atgtcagctgatgaggcagggaatctgaagaagaagattgatgaccagggcgagaaagtg
cgacaactgaaggcctccaaagcagcagaggatgaagtaaagaaagctgtagaagtcctc
ttgtcactgaagagtcagtacaaagatctaacaggagaggatctatctggaggtggccga
aaagacaagaaggagaagaaaaaagacaagaaagtcacagagaagaaagaggaagtcaaa
gtgcaggaggactccaaagatcacaaaaaaatcacaagacttggcctagaagcaaagaaa
gaggagaacttgtcagactggtactcacaggtcattacaaaagcagaattgatcgagtac
tacgatgttagtggctgttacattctacgaccctggtcatattccatttgggagagcatc
aaagaattttttgacagagaaattaagaaattaggtgtagaaaatacatattttcccatg
tttgtatcccaccaagcactggagcgagaaaaaactcacattgcagattttgccccagag
gtggcctgggtaacaaagtctggtaaatccgacttggctgaacctatcgctatccgtccc
acaagtgaaactgtgatgtacccctcatatgccaagtggatcaagtctcacagagatctc
ccattaaaactgaaccagtggtgtaatgttgtgaggtgggaattcaaacatccacagcca
ttccttaggaccagggaatttctatggcaggaaggacatactgcatttgccacagctgag
gaagctcaggaggaggtatatgctatacttgaactgtatgccagagtgtatgaggatctg
ttagctatcccagtggtcaggggcaggaaaactgagcgcgagaagtttgcagggggagac
tttaccacaacagtagaggcctacatatcggctagcggaagagctatacagggaggaaca
tctcatcacttaggacagaatttctccaagatgtttgagatttgtatccaagaccaagaa
actttggagaaacagtttgtgtatcagaattcttggggtctgacaactcgaaccattgga
gttatgtgtatggttcatggcgacaacaccggactagtgctgccacctaatgtcgccagt
gtccaggtgatcattgttccctgtggaataacagccaatctgtccaagtcagacgagcag
gatctgatggataaatgtgaggccctgaagaaggagctgttggcagccgatatcagaacc
cgaaccgacctgagggacaactactcaccgggctggaaatttaaccactgggagcttaag
ggagtaccaattcgagtggaacttggaccccgtgacatcaaacaaaaccaactggtagcc
gttagacgagatacttcagagaaaatgattctaaagagagaaaacattgataaacaactt
gcagatctacttaaaaacatccaggacagtctttttaatagagctaagttggacttggac
agtcacatgattgtttctcaccagtggaaacacttctgcgattctctggacaacaagaag
ataatccaagcaccgttctgtggggacgaagattgtgaagagaagatcaagaaagatagt
gcaagggatgcagtggttgaggagggagcccccgccatgggagcaaaaggtctgtgtatt
cccttcaaacaaccggagactttaaaatcaggcacaaagtgtatccatccagactgcaag
agagatgccaagttcttcactctgtttggaaggagctactag
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