Ostrea edulis (European flat oyster): 125650443
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Entry
125650443 CDS
T09123
Name
(RefSeq) DNA polymerase iota-like isoform X3
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125650443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oed03400
]
125650443
Enzymes [BR:
oed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125650443
DNA repair and recombination proteins [BR:
oed03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
125650443
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_HHH_1
UBM
IMS_C
HHH_2
DNA_pol_lambd_f
IMS_HHH
HHH_5
Cdd1
Motif
Other DBs
NCBI-GeneID:
125650443
NCBI-ProteinID:
XP_048734722
LinkDB
All DBs
Position
5:complement(14941600..14953954)
Genome browser
AA seq
605 aa
AA seq
DB search
MSYKISEFLLKYTPYVERLGMDENYLDVTDLVEQRTDFPSKVAGHIFGDTDGDLVEDICP
CGCYERILIGSHIAEEIRAALHKEVGVTCCAGIAHNKLLAKLAGEQHKPNQQTSLFSHHV
ETFMAKLPKARSIPGVGSATAKRLSEFGVVTMTDLQQCPLEDLRKELGDSMAATIKQLSQ
GIDDTPIIPYSKPQTLSDEDSFKNCCSVKEASQKVKELLRSLMTRLVEDGRIAGTVRLTI
RRLSAENKYTNRESKQCNIPSHIISKLTKENQEQPCDKMQGIVMLLFNKLVDVKKPFHLT
LINIAFCNLTERNKNSISHFFSPKKDRNSEVYLSSDSNRHDSLDRSDVCPEIQSFNQTRE
NCSSSGHATTCNSYTNLISCDSRKANSACLMKTHSSQNTVTSVCPVNENDNASCSSNKRK
SLSSQSGFFSKRFKRTTRESPQILNSNHIDSEVFSQLPPDIQKEIFQANSDLKLSADIAV
EQKTCSLKDDINATFQRDSPEEKRCNTETLNEKSEESRLCKSDSTDFKSSVKVTEATESS
FVPAGYDREVFLSLPADIQRELLKEEKNKAEWAYVKQVKSSGRYQTKDAKTSKSGNLLSF
FKRSK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtcttataagatatcagaatttctacttaagtacacaccatatgtagagagacttgga
atggatgaaaattatttagatgtaacagatttggtggaacaaagaacagattttccttca
aaagttgctggtcatatatttggagacacagatggagacctagtggaagacatttgtccc
tgtggttgctacgagaggattttgattggttcccacatcgcagaagagattcgtgcagca
ttgcacaaagaagttggggtgacctgctgtgctggtattgcacacaacaaactgttagct
aaacttgctggagaacaacacaagccaaatcaacagacatcacttttttcacatcatgtt
gaaactttcatggctaaacttccaaaagcaagaagtattccaggtgttggttcagccact
gctaagagactttctgaatttggtgtggtcaccatgacagacctacaacagtgccctcta
gaggatctgaggaaagaactaggagacagtatggctgccactatcaaacagctgagccaa
gggatagatgacactcccatcattccttacagcaaaccacagactttaagtgatgaagat
tccttcaaaaattgctgctctgttaaagaagccagtcagaaagtgaaggaattattgagg
agtttaatgactaggcttgtagaagatgggcgcattgcaggaacagttagactgaccatt
cgcaggctgagcgcagaaaacaagtacactaacagggaatccaagcaatgtaatattccc
agtcatatcatctctaaattgactaaagaaaaccaagaacaaccctgtgataaaatgcaa
ggtattgtgatgcttctcttcaacaaactggtggatgtcaagaagccttttcatctaact
cttatcaacatagcattctgtaatctcacagaaagaaacaaaaactctatcagtcatttc
ttttctcccaaaaaggatagaaacagtgaagtgtatttgagcagtgacagcaacagacac
gacagtcttgatagatcagatgtatgtccagagattcagtccttcaatcaaacacgggaa
aactgctcatcttctggccatgcaaccacatgcaactcgtacaccaatctgataagctgt
gactcaagaaaagccaatagcgcatgtctgatgaaaactcattcttcacaaaatacagtc
acatctgtttgccctgtgaatgaaaatgacaatgcaagttgttcatcaaacaaacgaaaa
tctttgtcttcacagtctggctttttcagcaagagatttaagaggactaccagagaatca
cctcagattctgaattctaatcacattgattcagaagttttctctcagcttccaccagac
atccagaaagaaatattccaggccaattctgatttaaaattgagtgctgatattgctgtg
gaacagaaaacttgtagtctgaaggatgacattaatgcaacttttcaaagggattctcct
gaagaaaaaaggtgcaacactgaaactttgaatgagaagtcagaagaaagcaggttgtgt
aaaagtgattccactgacttcaaatctagtgttaaagtgacagaggcaactgagtcttca
tttgttccagcagggtatgacagagaagttttcttgagcttgcctgcagacattcaaaga
gagctcttaaaggaggaaaaaaacaaagcagaatgggcttatgttaaacaagtgaaaagt
agtggtagatatcaaactaaagatgcaaaaacttctaaatcaggaaatcttctaagtttc
tttaaaaggagcaagtag
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