Ostrea edulis (European flat oyster): 125650479
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Entry
125650479 CDS
T09123
Name
(RefSeq) DNA polymerase subunit gamma-1-like
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125650479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oed03032
]
125650479
03029 Mitochondrial biogenesis [BR:
oed03029
]
125650479
Enzymes [BR:
oed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125650479
DNA replication proteins [BR:
oed03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
125650479
Mitochondrial biogenesis [BR:
oed03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
125650479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
DNA_pol_A_exo1
ORC5_lid
Motif
Other DBs
NCBI-GeneID:
125650479
NCBI-ProteinID:
XP_048734786
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All DBs
Position
5:complement(36957567..36996021)
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AA seq
1123 aa
AA seq
DB search
MTACTNSFRPGFHTWSYRRRLLARFSEKRVFPLSHNFCMVNILQTKTKATKSTSRPRVNE
INIQLLPENLHKQVFPNTDCTERETVTELKDIKENLAKHGLWGKETTVLNDVNLNLPELQ
GKSVTEHFYNIANEQINGYIQLTKLLMAGPIPQKPKKWSQKAGWTRYDAKTGKPTAVECP
GEDIFVFDVEILVKEGHYPTLATALSPTNWYSWCSEAVLMDKFRWTKNPRMSDLIPLESS
PKEHSSHLAGNQKKIVIGHNVGFDRSFIKEQYNIKKSCVRFLDTMSLHIAVCGMTSFQQI
LYQSSKKETNRKDVREYLEMKSSRREMVDNYWTSESTMNNLNDVYQHHCGGAPLKKATRD
VFVKGDMADVREMYQELCSYCAADVEATLHVFRKVWPQFLERFPNPVTLSGMLEMGTAYL
PINQNWERYINQSDAVYDDLQNELSRLLQKLANEACELLHDDKYEGDLWLWDLDWSVNQY
KLNKPKKKPSQNNKEKMPEQVLEDILATKDRIPKTARHMIGYPAWYRELCPRKTDKDWKP
GPSLISTSRRITPKLLRMTYKGYPLHYADQYGWGFLIPDKHKAASDRQKLAMAEGEMSKF
PIKNLFKMCNEAVSEDLLVPMSDKEIERMLNSAKDDMEWMERAKHLDEAGIKKQAKKKDH
ILEVKETKYDIGIPGCWFQKLPHKDGKGSNVGNPLSKDFLPLIETGVLKSLLMTAETVLK
LTKMCSYWKNNKDRISGQMAVEWGKEDLPDAVTSDLSYNVDGLYGAIVPRVVPAGTITRR
AVEKTWMTASNAYTDRVGSEMKSMIQSPPGYHFVGADVDSQELWIAAIIGDSKHRIHGST
PFGWMTLQGNKSDRTDLHSKTAETAGISRDHAKVLNYGRIYGAGQKFAETLLMNFNHNLT
SVEAAAKAKKLYETTKGRRKREHRRWEGGTESEMFNMLESIAKSSSPKTPVLRASISKVL
EPEIIGDEFMTSRINWVVQSSAVDYLHLMLVCMNWLCNQYDINARFAISIHDEVRYLVAS
KDRYRAVLALQITNLFTRCMFARALGMNDLPQSVAFFSKVDIDQCLRKEVTLECRTPSNP
NGMERAYNIPMGEGLDIYETLDVTNGSLSRLEDSHNEKAELAQ
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttgcacaaacagtttccggcctggcttccacacatggagttatcgacggaga
ttattagcaagattctcggagaaaagggtcttccctctaagtcataatttttgtatggtc
aacatacttcagacaaaaacaaaagcaacaaagagcacatccagaccaagggtgaatgag
atcaatatccaactgctgccagagaacctgcacaaacaagtttttcctaacacagactgt
acagagagagagactgtcacagaattaaaagacatcaaggaaaatcttgctaagcatggt
ctatggggtaaagaaactacagtgttgaatgatgtcaatttaaatctcccagagcttcag
ggaaagtctgttacagaacacttctataacattgctaatgaacagattaatggatatata
caactgacaaagctgttaatggcaggaccaattccacagaaaccaaagaagtggtcccag
aaagcaggctggacaaggtatgatgctaaaacaggaaaacccactgcagtggagtgtccc
ggggaagatatcttcgtgtttgatgtggaaatcttggtgaaagaaggacattatccaacc
ctggcaaccgccctctcaccaactaactggtattcttggtgctcagaggcagtgctgatg
gataaattccgctggactaaaaatcctcggatgagtgatctgattcctctggaatcttct
ccaaaggaacacagctctcatttggcaggaaatcaaaagaagattgtgattggtcacaac
gtgggctttgacagatcatttatcaaggagcagtacaatataaagaaatcctgtgtgcga
tttctggacaccatgtcccttcacattgcggtgtgtggaatgaccagtttccagcaaatt
ctctaccagtccagcaagaaggaaaccaacaggaaagatgtccgagagtacctggagatg
aaatcatccaggagggaaatggttgataattactggacgagcgaaagcacgatgaacaac
cttaatgatgtttaccagcaccactgtggaggggcacccctaaagaaagccaccagggat
gtgtttgtcaaaggcgacatggccgacgtcagggagatgtaccaagagctgtgttcatat
tgtgctgctgacgtggaagcaactcttcatgtttttagaaaagtgtggccacaatttctt
gagagatttcctaacccggtgacactgtcaggaatgttagagatggggaccgcctactta
cctatcaatcaaaactgggagagatacatcaaccaatcagatgctgtgtatgatgacctt
cagaatgagctatctcgactgctgcagaagttagctaatgaagcttgtgaacttctacat
gatgacaaatatgaaggagacctctggttgtgggacttagattggagtgttaatcagtat
aaacttaacaaaccaaagaagaaacctagtcagaataacaaggaaaaaatgccagaacaa
gtgcttgaagacatcttagctacaaaagatagaatccccaagactgcccgtcacatgatc
gggtacccagcttggtatagagaactgtgtcccaggaagacggataaagactggaaacct
gggccctccctgatctctacctctcgtcgtatcacccccaaactcctgagaatgacatac
aaaggttatcctctacactatgctgaccagtatggatggggatttttaatccccgacaaa
cacaaggcagcctcagacagacagaaactagccatggcagaaggggagatgtctaaattc
cctatcaaaaacctgttcaagatgtgtaatgaagctgtgtcggaggacttgctggtcccc
atgtctgacaaagagatcgagagaatgttgaactctgccaaggacgacatggagtggatg
gagagagctaaacatttggatgaggctggcataaaaaagcaggccaagaaaaaggatcat
atcctagaagtgaaggaaactaagtatgatattgggattcctggctgctggttccaaaag
ttgcctcacaaggatggcaagggaagcaatgtgggtaaccccttgtcaaaagacttcttg
ccattgattgagacaggggtacttaaatctcttttaatgacagcggagactgtactgaaa
ctgaccaagatgtgctcctactggaaaaacaacaaagacagaatctcgggacagatggct
gtagaatggggaaaagaagacttaccagatgctgtgacaagtgatctgagctacaatgtg
gacggattgtatggagccattgtacccagagtcgtaccagctggaaccatcactaggcga
gctgtagaaaaaacatggatgacagccagcaatgcctacactgaccgtgtaggaagtgag
atgaagtcgatgatccagtcacccccaggttaccactttgtaggggctgatgtggactcc
caggaactctggattgctgccatcataggggactccaaacacaggatacacggttctacc
ccatttggatggatgacacttcaaggaaacaagagtgacagaacagacctacacagtaag
acagcagaaactgctggaatctccagagatcatgctaaggtcttgaattatggtcgcatt
tatggggctggtcaaaaatttgcagagacgctgctgatgaattttaatcacaatttgaca
tctgttgaagctgctgctaaagcaaagaaattgtacgagacaaccaaaggtagaagaaaa
cgagaacataggagatgggaaggaggaactgagagtgagatgttcaacatgctggagtct
atagccaagtcatcctccccaaagacacctgtgctgagggcctccattagtaaagtttta
gaaccagaaatcattggagatgaatttatgacaagtcgcatcaactgggtggtgcagagt
tcagctgtagattacctccacctgatgttggtgtgtatgaactggctttgtaaccagtat
gacatcaatgcacggtttgccatcagcatccacgatgaggtgcgctacctggtggccagc
aaggatcgttacagggccgttttagctctacagatcacaaacctctttaccaggtgtatg
tttgcccgagccctgggtatgaatgatttaccgcagtcagttgctttcttcagcaaagtg
gatatagatcagtgtttgcggaaagaagtaacgttggagtgtaggactccgtctaaccct
aatggtatggagagagcatacaatattccaatgggtgagggattggatatctatgagacg
ctggatgtcaccaatggatcgcttagtcgtttggaagattcgcataatgagaaggctgaa
cttgctcagtga
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