Ostrea edulis (European flat oyster): 125650524
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Entry
125650524 CDS
T09123
Name
(RefSeq) chondroitin sulfate synthase 1-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oed01100
Metabolic pathways
Module
oed_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125650524
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oed01003
]
125650524
Enzymes [BR:
oed01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
125650524
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
125650524
Glycosyltransferases [BR:
oed01003
]
Glycan extension
O-Glycan
125650524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Glycos_transf_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
125650524
NCBI-ProteinID:
XP_048734854
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All DBs
Position
5:89176997..89191211
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AA seq
789 aa
AA seq
DB search
MARKYGWRWKLRNFAGLVFGLCFGILLSSWCRHSLLPCGSQKDRCCIHINYHVNIAVEHL
HVPDQLPQRALPISDTKEFQLNKYIKPEERGFLLIGVITAKKFLDTRAVAAFDTWTSTCQ
GICKVLFFSSEGSLSHRIPVISLDGVDDSYPPQRKSLLMLKYMHDNYINNFEWFMRADDD
VFIKGDRLEKLLRSINSSVPQYIGQAGIGKKEELGKLYLNKNENFCMGGPGVVFSHITLR
MVAPHVGECLQNLLTTHEDVEVGRCVRDHTGLSCTWAFEMQRLFFQNYKEEKGSFRTTLK
DKAVKKAVTLHSVKEPKQQYKIHNYLKSVHIQDLQHKELLLEREIASIDRMLGAQTATGK
QGLPPNLNKFIPKSASDILSWDYISKAIVSHKNLNPRQGLNFPLKVALDDIIGQVIQIVN
RNARQKGRTIDYKDLWYGYRRVNPLHGADYVLDILLNYKKHTGNKVNVAVRRHAYLQQTF
GKINFIEDPFSSNTHPSTYELESPFMFKQFGAGNQSSLSYISNKVEEIIHFILPLMGRLN
IFRRFMANYEDVCLKTGAKTQLHIILFNDTDADILINLIGGYQMKYGGDNIEVIFAEGAF
ARAKALDLGAVQCNQNDLLFFIDVDITFTSSILHRIRMNTKQGSQVYYPIVFSQFDPSVL
CSFYKIKPCHMDNFNLSADTGYWRNFGFGIASMYKSDLEQVGGFDTSIQGWGKEDVDLYT
KFSESEIQIFRGVDPDLIHLYHSVHCDSALNDAQMTMCVGSKSASYASMHILAEIIQRTP
GILNRDPGS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaaatatgggtggcggtggaaactccgaaatttcgccggccttgtgtttgga
ctgtgctttggaatattgttgtcttcttggtgccgtcacagtctactcccgtgcggatcc
cagaaggaccgctgttgtattcacattaattatcatgtcaatattgcagttgaacacttg
cacgtaccagaccagctccctcaaagggcattgccaatctccgacaccaaggaattccag
ctaaacaagtacataaaaccggaggagagagggtttttgttgataggtgtcataacagcc
aaaaagtttttggacactcgtgcagtggcagcctttgatacttggacaagcacctgtcag
ggcatttgtaaggtgctatttttctctagtgaagggtccctgtcacaccgcatacccgtt
atcagccttgatggtgttgacgattcctacccaccccagagaaaatcgctgctgatgtta
aagtacatgcatgacaattatattaataactttgagtggttcatgagagcagatgatgat
gtcttcattaagggtgatcgtctggaaaagttacttcgttccatcaatagttctgtaccc
cagtacattggacaggcagggattggaaagaaagaggaactgggaaagctttatctcaac
aagaatgaaaacttttgtatgggaggcccaggggtggtgtttagtcacatcacactgaga
atggtggcccctcatgtcggggagtgcttgcagaacctcctaaccacccatgaagatgta
gaggttggacgatgtgtccgggaccatacaggtctgtcctgtacatgggcatttgagatg
cagcgcttgttcttccagaactacaaagaggagaaaggttctttcagaacaaccctaaaa
gacaaagcagtgaagaaagctgtcacattgcattccgtcaaagaaccaaagcagcagtac
aaaatccacaactacctcaagtctgttcacatacaagatctccaacacaaagagcttcta
ctggagcgagagattgccagcatagaccgcatgctcggggctcaaactgccacaggcaag
caaggcttgcctccaaatctcaacaaattcattcccaaatctgcatcagacatattatca
tgggactatatatcaaaagccattgtatcccataaaaacctcaatccacgccagggattg
aactttcctctcaaagttgctttggatgacatcataggtcaggtgattcaaattgtgaat
agaaatgctcggcagaagggaaggacgatagattacaaggatctgtggtatgggtaccgc
agggtgaaccctctccatggggcagattatgtattagatatacttctgaactataaaaaa
cacacaggtaacaaagtcaatgtggccgtcagacgacacgcttatttacagcagactttt
ggcaagatcaacttcattgaagatcccttctcatcaaatacacacccatctacatatgaa
ttagaatctccctttatgtttaaacagtttggagcaggaaatcagtctagtctttcatat
atttccaacaaagtcgaagaaatcatacactttattctccctctgatggggaggttgaac
attttcagacgcttcatggcaaactatgaagatgtctgtctaaaaaccggtgccaaaaca
cagcttcatatcattctattcaatgatactgatgctgacattctcatcaatctgattggt
ggatatcaaatgaaatatgggggtgacaacattgaggtgatatttgcggagggtgctttt
gcccgtgcgaaagccttggacctcggggcagttcagtgtaatcaaaatgatttactattt
ttcatagatgtagatatcacatttacttccagtatattacacagaatacgcatgaacaca
aagcaggggtcacaggtgtattatcctattgtatttagtcaatttgatccctcggttctg
tgcagtttttacaagataaagccgtgccacatggacaactttaacctctcggctgacacc
ggctattggaggaatttcggttttgggatagcaagcatgtataaaagtgatttagagcaa
gttggaggatttgacaccagcatacagggctgggggaaagaggacgtggacctctacaca
aagtttagtgagagcgagatccagatatttcgtggtgtggatccagatttgatccaccta
taccattctgttcactgtgattctgcattgaatgatgcacaaatgactatgtgtgtaggt
tctaaatctgcaagttatgcttcaatgcacatcttggccgaaatcattcagcggacacct
ggaattttaaacagggaccctggatcatga
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