Ostrea edulis (European flat oyster): 125650537
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Entry
125650537 CDS
T09123
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125650537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oed03009
]
125650537
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
Pre-60S particles
GTPases
125650537
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
GTP_EFTU_D2
EFG_III
EF-G_D2
MMR_HSR1
ADDB_N
EFG_IV
SSXT
Par-4_C
Motif
Other DBs
NCBI-GeneID:
125650537
NCBI-ProteinID:
XP_055995190
LinkDB
All DBs
Position
5:complement(89198010..89224404)
Genome browser
AA seq
1114 aa
AA seq
DB search
MRGATPELLSLLQRNPANIRNICILAHVDHGKTTLADALVASNGIISQRMAGKLRYMDSR
EDEQIRGITMKSSAISLIYNYSKDEYLINLIDSPGHVDFSSEVSTAVRLCEGAIVVVDVV
EGVCPQTHAVLRQAFLENIKPVLVLNKIDRLIVELKMEPMEAFYHLQQILEQVNLVTNEL
FTVEAMEKSAVEVDDNGGNMSQIHEWTTDEDEENRNIYFCPDQGNVIFSSAYDGWGFSIS
DFAVLYASKLGINQEVLKRTLWGDFYLNTKTKRIMKGAQIKGKKPLFVQFILENLWSVYD
TIYVRRDKEKTEKIITSLGLKILPRDMRHSDSRVQLQAVCSQWLPVSDAVLRVVVSKLPS
PLAMSEERVEKLMCSHMRKFESLPSETQSLKQSFLTCSASEESPVIVFVSKMLPVDKKLL
PQNKQRPLTAAEAAERRRKAREKMAEKLATQNKEQTTTEANTLHGESYEISLPENDTDSE
EKGPDFVFIAFARVFSGTVRKGQKLYVLGPKHDPALISRKLQSGEEIKEATSIQELSHDD
HVTCVTIKDLFVLMGRELEEMDHIPAGNILGIRGLEDHILKSATVSSSLMCPTFCDLYFD
AAPIVRVAIEPIHTRDMQNLVTGLKLLNQADPCVQVLVQETGEHVIITAGEVHLQRCVED
IKERYAKIDINVSSPIVPFRETIVPPPKLDMVNEAISDRRQVLNKKDSEDEEVIEVGLVE
VTTINRRCTLRIRAVPLPDDITRLLEENQNLIKTMGQISKSQGKGKGWLEVHQNVIDSIR
EFKCQLNKVFKGSGKMWRDAENQMWSFGPKRVGPNVLLNRVKGYDRANVWDCVETKQQEL
KLRQYDNSIISGFQIATLAGPLCEEPLRGVCFIIEEWDYIRSSNSISYDEDVQKLEVTDL
NSCDNTMSESPSDVVSSETVQDGDDTESETKSSDSESEPSEQRQRMGHSHMSGQLIYCVK
AACRKAFQTQPQRLMVAMYKCNIQATAEVLGKLCGVLGKRYGRVIEDTMKEGSQIFNIKA
VLPVVESFGFTEDMRKKTSGLASPQLVFSHWEVVDVDPFWVPTTEEEYAHFGEKADSDNR
ALHYMNQVRKRKGLKVDEKIVEHAEKQRTLTKMK
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaggggggcaacaccagagttgctgtccttactacagcgaaacccagcaaacatacgt
aacatttgcatcttggcacatgttgatcatggtaaaaccaccttggctgatgctcttgtt
gccagcaatggtattatatcacagagaatggcaggcaagcttcggtacatggacagtcga
gaggacgaacagatacgaggaatcacgatgaagtctagtgccatatcattgatatacaat
tacagtaaagatgaatacctgattaatctgatagattccccgggtcacgtggatttctcc
agtgaggtgtccacagctgtccggctctgtgaaggggccattgttgttgtggatgtggta
gagggtgtctgtcctcagacccatgctgtgctccgtcaggctttcctggagaacattaaa
ccagtgctagttttgaataagattgatcgcctaattgtagaactaaagatggagcccatg
gaagctttttatcatcttcagcaaattcttgaacaggtaaacttagtgaccaacgagttg
ttcactgtggaagccatggagaaatctgctgtggaagttgatgacaatggtggtaacatg
tcacagattcatgagtggactactgatgaagatgaagaaaacagaaatatctatttctgt
ccagaccaaggaaatgttatcttttctagtgcatacgatggctggggcttcagcatatct
gattttgctgtgttgtatgccagtaagcttggcatcaaccaagaagttctaaagagaaca
ttatggggagatttttatcttaataccaaaacaaagagaatcatgaagggggctcagatt
aaaggcaagaaaccgctctttgtacagtttattctggagaatttgtggtcggtgtacgac
acaatatatgtcagaagagataaggagaaaacagaaaaaataataacgtccctgggtttg
aagatactccctcgtgacatgcgacactcggacagccgggtccagctacaagccgtctgt
agtcagtggttaccagtctctgacgctgttctcagagttgtagtcagtaaacttccctcg
ccattagccatgtcagaagagagggtggagaaactgatgtgttctcacatgaggaagttt
gaatcactgccttcagagacccagagtctaaagcaatctttcttaacctgctctgcttca
gaagaatctcctgtaattgtgtttgtatctaagatgttgccagtggacaaaaaactgctc
cctcaaaacaagcaaagacctttaacagcagctgaggcagctgagagaagacggaaagcc
agagaaaaaatggcagagaagttggcaactcaaaacaaggagcagacgacaactgaagca
aatactctgcatggagagtcttacgaaatctccctcccagagaatgacactgacagtgag
gagaaggggcctgactttgtgttcattgcatttgcacgggtatttagtggaaccgtcaga
aagggacagaaactctatgttctcgggcccaaacatgaccctgcattgatatccagaaag
ttacagagtggcgaggaaataaaagaagccacaagtatccaggagttgtcacatgatgat
catgtgacctgtgttactatcaaagatctgtttgtgctcatgggaagggaactggaggag
atggaccacattccagcaggaaacatattaggaatcaggggcttggaggaccacatcctg
aagtctgcaactgtgtctagttccctcatgtgtccaactttttgtgatctgtactttgat
gcagctcccattgtcagagtagccatagaacccattcatactcgtgacatgcagaatctg
gttacaggtctcaaattattgaaccaggctgacccctgtgtacaggttctggttcaggag
acaggtgaacatgtgatcataacagctggagaggttcaccttcagagatgtgtggaggac
ataaaagaaaggtatgccaagatagatattaatgtgtcctcacctatagtcccattccga
gaaaccattgtccccccacccaaactggacatggtaaacgaagcaatttctgaccggcgc
caggtcctgaacaagaaagatagcgaggatgaggaggtgatagaagtgggcctagtggag
gtgaccacgatcaacaggaggtgcactctcaggatcagggcggtgcctctacccgacgac
atcacgaggctgctagaggagaatcagaatctgataaaaacgatgggtcagatctcaaag
tcccaagggaaagggaagggttggctggaagtccaccaaaatgtgatagactccattcga
gaatttaaatgtcagctaaacaaagtattcaagggcagtggaaagatgtggagggatgca
gaaaatcagatgtggtcttttggacccaagagagttggtcctaatgtactgcttaatcgt
gtgaagggatatgacagagccaatgtatgggactgtgtggagaccaaacaacaggagctg
aagctcagacaatacgataacagcataatcagtggatttcagatcgctactctggctgga
cctttatgtgaggagccccttcggggagtatgtttcattattgaagaatgggactatata
agaagcagtaattctatatcttacgatgaggacgttcagaagttggaagtgactgattta
aattcctgtgataatactatgtcagagagtccgagtgatgtagtgtcaagtgaaactgtc
caggatggggatgacaccgagtctgagaccaaatcttcagacagtgaaagtgagccctct
gagcagagacagaggatggggcatagtcacatgtcaggtcagctgatatactgtgttaag
gcagcctgccgaaaagcattccagactcagccacaaagacttatggtagccatgtacaag
tgtaacattcaggccacagcagaggtcttaggaaaactgtgtggtgttttggggaagagg
tatggccgagtgattgaggacaccatgaaagagggatctcaaatttttaacattaaggcg
gtgctgccagtggtggagagttttggtttcactgaggatatgaggaaaaagacgagtgga
ctggccagcccccagctggtgtttagtcattgggaggtggtggatgttgaccctttttgg
gtccccacaacagaggaggagtatgctcattttggagagaaagcggactcagacaacaga
gccttgcattatatgaaccaggtccgcaaacggaaaggactcaaagtggatgagaaaata
gtggagcatgctgaaaagcaaaggacactcaccaaaatgaaataa
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