Ostrea edulis (European flat oyster): 125650586
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Entry
125650586 CDS
T09123
Name
(RefSeq) DAZ-associated protein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125650586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125650586
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125650586
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
125650586
NCBI-ProteinID:
XP_048734952
LinkDB
All DBs
Position
5:91105244..91135819
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AA seq
534 aa
AA seq
DB search
MHRGFKNSNGSSRNEAGKLFIGGLSWNTDQDSLLNYFSQYGEVVDCVVMKNQQTGKSRGF
GFVTFQDSECVETVLAASPHNIDGRQVDAKLCNPKAANKGPKEGGGRGHGGGGGGGGGGG
GGGDKDRKIFMGGLPNVDEDFLSNFFGKYGKVVDVNIMIDQQNKKSRGFGFLTFESEDAV
DQVCAEHFININGKQVECKRAEPRDGRDNKPGFGGRRGGMQDMMGPPHGMDGGWNQGGNW
NQGPPQHGPPPPGPPMGNMGFPPQGPGGYQQPPPGQGFPQGPPPQVPPQQPPFSQPSYQG
GYQSPPGYQQGGWSAQPPNASPGQDTQQTYSAYAAPQPGYGQPPTTAYSQWGATTSTPVT
PQPTAAQPPTQQPALSNYGPYGQPPAAAAPATPGYTSAPGTQSYSSHYNVAVADPAQPAA
PTTAQTGYNSYNPYGASQTPAPTVPDPYAQTVQPPAAPGAQVPMGVPDPYAQPPAAPPTA
APGYGEPPGFGAAPQPAAAYGGQGDGLGGYAAQPGGGYQRASVPSTQGYHPYRR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgaggattcaaaaactccaacggcagttcaaggaacgaagcagggaagctcttc
ataggtggcttaagctggaatactgaccaagactctttgttgaactacttcagtcagtat
ggagaggtggttgactgtgttgttatgaaaaatcagcagactgggaaatctcgtggattt
ggatttgtcacattccaagatagtgaatgtgtggaaactgtgctcgctgcatccccacat
aatattgatggcagacaggttgatgccaagctctgcaacccaaaagcagcaaacaagggc
cctaaagaaggtggtggaagaggacatggaggaggaggaggtggtggtggtggtggtggt
ggaggaggagacaaggaccggaagatcttcatgggaggattacctaatgtggatgaggac
tttctcagtaacttctttgggaaatatggaaaggttgtggatgtcaacatcatgattgac
cagcaaaataaaaagtccagaggctttggatttttgacattcgagtcagaagatgctgta
gatcaagtttgtgcagaacattttattaacatcaatggaaaacaggtggagtgtaaacgt
gcagaacccagagatggacgtgacaacaaaccaggtttcggtgggcgccgaggaggcatg
caggacatgatgggaccccctcatggaatggatggaggctggaatcaaggagggaactgg
aaccagggcccaccacaacacggaccaccccctccaggaccccccatgggaaatatggga
tttcctccccagggaccaggagggtatcaacagcccccaccaggccaaggatttcctcaa
ggaccacctccacaggttccaccacaacagcctccattttcacagcccagttatcaagga
gggtaccagtcaccccctgggtaccagcaaggaggatggagtgcacagccccctaatgct
tcacctggacaagatacacagcagacatactctgcttatgcagcaccacagcctggttac
ggtcaaccccccaccactgcatactcacagtggggtgccacaacaagcacaccagtgaca
ccacaacctacagctgctcagccccccacccagcaaccagccctgtccaattatggccca
tatggacagccccctgctgctgctgcccccgccacacctggatacacttcagctcctggg
acacaatcatacagttctcattacaatgtagcagttgctgaccctgctcaacctgctgct
cctactactgcacagactggatacaatagttataacccatatggagcatctcagacacct
gcccctacagttcctgacccatatgcccaaacagtgcagcctcccgcagcaccaggagca
caagtccccatgggagtccctgacccttatgcccaacctccagcagccccacccactgct
gctccggggtatggtgagccaccaggttttggtgcagcacctcagccagctgcagcatat
ggaggtcaaggagatgggctgggaggatatgcagcccagccaggtgggggataccaaagg
gcctctgttccttcaacacagggctatcacccatatagaagataa
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