Ostrea edulis (European flat oyster): 125650680
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Entry
125650680 CDS
T09123
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125650680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125650680
03036 Chromosome and associated proteins [BR:
oed03036
]
125650680
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125650680
Coactivators
SAGA/TFTC/STAGA complex
125650680
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
125650680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
PBP_dimer
Motif
Other DBs
NCBI-GeneID:
125650680
NCBI-ProteinID:
XP_048735116
LinkDB
All DBs
Position
1:complement(51407754..51434803)
Genome browser
AA seq
923 aa
AA seq
DB search
MATTNTLDDILSTEIDENAVNALVGSLESQLASTTHKDTAHSISDASMNNNHIGNASAPV
ACTSTVYLHSIPTSAPKNMTIQNNVALNNANISHLKASQSESQLLGLNSIVSNVNSNEGG
DLSVNVNSIRRNSPVPVNHVRIVSQSQTITNSRNSPSPSVPGQLNNVSVASVRSSTPNQV
VINNGQSVPNVNSNVNSANSAHFNTADHKPVIRSRHNSPLNQISSQDVKPRPSQIVNIKH
EPLGSPQTGVLNVKQETGSPSSGFGVKQEHQLAIQPVPGAPHNVPQPNVQLVQGKGQVVT
GNASVITVRTPGQTHPSQVVMQPQIITTQSSSAQMHVVSVSGCTVATRPTGTVQMTQGKN
MNPRMATASFRPQQINIAPRPGTTQNTIALPPGVQIPPGAQLVRNEQGQLVFVIQQPPAT
SSATGHRMFVRPSSSASPVRPQQIVTIQPPNSAITPQGIPRQVHLSTVVTTATPVPSLVR
TSAPGPAIHTTPSGAPQQPPDNVKKCKNFLSTLIKLAQSQPPQTVKNVRELIQGLIDGKV
EPQTFTEKLQVELRSSPQPYLVPFLKKSLPALRQALIANTMTIDGVKAPPMEVLHPVVSM
ATLVHPPVPHHPSTQHAAVRGQHIIGIPKTVTAISGKTQHLPGVAGISASSQSRSNTPHK
EKTKYDSLKDDDDINDVATMGGVNLSEESKNILASNADFIGTQIRSCKDEAFLHHGPLLS
RITAIAKKQGLDDISSDVANLVSHATQERLRDLLEKLDTIAEHRIEIYKMNEKFEASNDA
KSQLKFLEELDKLEKKRHDDQEWEKIMKVAKSRSKNEDPEQQKIKQKAKELQQAEIERMR
QEEANQTALAAIGPRKKRKTDFGEISATSTGGLSTSNGGSSSSSKNTSTRQRIKRVTLRD
VLFLMEQERSLGKSTLLYKTFLK
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacgaacactctcgacgatattttgtcaacagaaatcgacgagaatgctgtt
aatgccttagttggttctctggagtcacagctagcctccacaacacacaaggacactgca
cattctatttctgatgcttctatgaacaataaccacataggcaatgcgagtgctccggta
gcatgcacttcaactgtgtatttacatagcatcccaacatcagctccgaaaaatatgaca
attcaaaataatgtagcattgaataatgcaaatatatctcatctaaaggcatctcagtct
gagtctcagttactaggtttaaattctattgtgtcaaatgtgaattccaatgaaggagga
gatctgtcagttaatgtcaatagtatcagaagaaactcgccagtgcctgtgaatcatgta
agaattgtttctcaatcacagaccatcacaaactctcgtaactcgccatctccatctgta
ccaggacagcttaacaatgtcagtgtggcaagtgttcgttcatcaacaccaaatcaagtt
gtaataaacaatggacaaagtgtaccaaatgtgaacagtaatgtgaattctgcaaatagt
gctcattttaatacagctgatcataaacctgttatacggtctagacataacagtccgtta
aaccaaatttctagtcaggatgtgaaacctagaccttctcaaatagtgaatattaaacat
gaacctttgggatcacctcagacgggggtgttaaatgtgaaacaggagacaggatctcca
agctcaggattcggtgttaaacaggagcaccaattagcaatacaacctgtgcctggtgca
ccacacaatgtgcctcaaccaaatgttcagttagtgcagggaaaaggacaagttgttaca
ggaaatgcaagtgtgatcacagttaggacacctgggcaaactcatccatctcaagttgtt
atgcaacctcaaataattacaactcaatcctctagtgcacagatgcatgtagtgtctgtg
agtggatgcactgttgccactcgtccaacaggaacagttcaaatgactcaaggcaaaaat
atgaatcccagaatggcaactgcatcttttagacctcaacaaattaatattgcaccgaga
ccaggaacaacgcaaaacacaattgcactgccccctggtgttcagatacctcctggagct
cagctggtcagaaatgagcaaggacagttagtttttgtcattcagcaacccccagctacc
agttcagcaactggccaccgtatgtttgtacgaccttcaagttctgcaagcccggttcgc
cctcagcagattgtgacaatacagccccccaactcggccatcacaccgcaggggattcca
cgacaggttcatcttagtactgttgtcaccactgctacccctgtacctagtctggtccgc
acatcagccccaggcccagccattcacacaacgccatcaggtgcacctcaacaacctcct
gacaatgtcaaaaaatgcaagaacttcctttctactcttataaaactggctcaaagtcaa
ccaccacaaacagtcaagaatgttcgagagttgatacagggacttattgatggaaaagtg
gagcctcagacattcacagagaaattacaagtagaacttcgttcatcacctcaaccatat
ttagtgccattccttaagaaaagtctgccagccttgcgccaagcattaatagccaatacc
atgacaatagatggagttaaggcacctcctatggaggtcctccatcctgtggtatccatg
gcaactctagtccaccctccagttcctcatcatccgtccactcaacatgcagctgtgcga
ggccaacatattattggaattcccaaaactgtgacagcaatctcggggaaaacacaacac
ctaccaggtgtggcaggcatatctgcttcgtctcagtcacgaagcaacaccccacataaa
gagaaaaccaagtacgactctctcaaggatgatgatgatataaatgatgtagctaccatg
ggtggtgtcaatctgtctgaagagagtaagaatatcttggccagtaatgcagacttcatt
ggaacacaaattcgttcttgtaaggatgaggctttcttgcatcatggcccgctactcagc
agaatcacagcaatagccaaaaagcaggggttagatgacatctcatcagatgttgctaat
ctggtttcacatgcgacacaagaacgtcttagagatctcctggagaaactcgacaccatt
gctgaacatagaatagaaatatacaagatgaatgaaaagtttgaggcttctaatgatgcc
aaatctcagctgaagtttctggaagagcttgataaactagagaagaaacgtcatgatgac
caggagtgggaaaaaatcatgaaggtggcaaagagtcggtcaaaaaatgaagatcctgag
cagcagaagattaaacagaaagccaaagagttacaacaggctgagattgagaggatgagg
caggaagaagccaatcagacagccctggcagctattggaccgaggaagaagaggaaaaca
gactttggagaaattagtgcaactagtactggaggactgagtaccagtaatggaggcagt
tcttcatcttccaaaaatacaagcacacggcagcgaatcaaaagagtgacattgcgagac
gttttattcttgatggagcaagagcgctctttgggaaaatcaactcttttatacaaaaca
ttcctcaaatga
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