Ostrea edulis (European flat oyster): 125650724
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Entry
125650724 CDS
T09123
Name
(RefSeq) nuclear pore complex protein Nup133-like isoform X1
KO
K14300
nuclear pore complex protein Nup133
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125650724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125650724
03036 Chromosome and associated proteins [BR:
oed03036
]
125650724
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125650724
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125650724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
125650724
NCBI-ProteinID:
XP_056022351
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All DBs
Position
5:complement(80311331..80378619)
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AA seq
1132 aa
AA seq
DB search
MFSPRTPSTRTRSSPYTPSGINPRTQNKRVSNLFTPKGRQSYTTKAHTNRSLQTSQLIEE
TEGYRIDGLGTPLPVLITEALALADKHTEITVKIDPSGWAWLVGGRKLFVWRYKGGQSVR
TVFCKELTLPPSDLAHNADRVCVIPNVTDKQSASCIAVSPEGVVRYWPNIAYEGSSTEIS
AELRGDECACVVNFEPFGCLLATTTSSLVLLSPVLGQNTLTCHPLKGSQGMFSGIGRRMS
SFIFGASTLQPSGAPLQAIVCGTCEDEDERPFYVLSGTQFQKWNLSQAVTEKLFYQIDVE
RMFREFLSKKVWNQDSRQLTQLKTWLLDMRTTQQGVVFLGAGVNMDVDLTVHFGLAFLDT
DINGTPSELESLMILDHQDTYSDDFEYSLQKYKLLLADPMTTTAYVYNRDHVLFIPGPST
EVINLQQPGGHILGAGSCDGTGVFFSGSMGLFSISSPQKQEVSIMEEPSQDMTTADMSVL
TASHAKMQELSMSEDRTARLKSAFIATMRGNIAAAQSTIDELFPPDEVSTDLDQTVVALD
KDLVNDFPAADPRWAESRQDATSSTTSLIIINQLNDKLRAHEYVINFLKKMNLWKQLNQV
NVRDTRMLTRHVMCEHAEKLQAAIALRQLHVEFTGIVDAAIKKVLEMRRDVNISLNLTPQ
DVFYREVSRIQEVVECLLEHQEEVLLADVTVTEILTVITSINTLLEDILHKALQYRQTKS
SMYDCEAPPGEVPEYVPWTSTSGDHGIRTFLLKQFNKTMEIVIPEVRDPESQEKIYQQLA
SIADIILDGYVSQLESLKNNVSKQQHYNELQRRYEQDRQQLILPMMKGKQYELAASLAEK
YYDFEILIQLCELSDNKERIEKYLHQFSHKGFANYLYTWYMKEGKRGRLLALPVGQQREL
GRFLQKEDIKTLSWLHNIQTNNFSKAHSTLLELARIEQDSLAKKKTLLSLSKLSGLAADP
DNGEIDSNILDINEEQELIAHQQQLPALVIENLGMEPNNMTVLSPVQLIELYISGTNIDA
TEYDFKKALDLLQYIDKTDPALDFESLRMHIWAQSILRDSWQQDESVDVMETVMNTVFFK
TVDLAYKEGVDVRTFMPGLRNILLCDELGDLKEDSNFQYLIQAGYEHIGQVL
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtcccagaactccgtctactcggactagatcgtcgccatacacaccctcagga
ataaacccacgaacccagaacaagagagtgtcaaatctcttcacccctaaaggaagacag
tcctatacaacaaaagcacataccaacagatcactacaaacgtcgcagctgatagaagag
accgagggatacaggatagatggattaggaacccccctcccagtcctcatcaccgaggcc
ctggccctggctgacaaacacacagaaataacggtgaagattgacccttctggatgggca
tggctggtgggtgggagaaagctgttcgtctggcgctacaagggtggacaaagtgttcgg
accgtcttctgtaaagagttgaccttgcccccaagtgaccttgctcacaatgctgaccga
gtatgtgtcatcccgaatgtgaccgacaaacagtctgcatcgtgtattgctgtgtcacca
gagggcgtcgtcagatactggccaaatattgcatatgaaggttcctcaacagaaattagt
gctgaattacgtggcgatgagtgtgcatgtgttgttaattttgagccctttggatgtctc
ctggcaactaccaccagctcccttgttctcctgtcacctgtgttaggacagaacacgctg
acctgtcacccattgaagggttctcaaggaatgttctcaggaattggacggaggatgtct
tccttcatcttcggtgcctcaacccttcagccatcaggggcgccgttgcaggccattgtg
tgcgggacgtgtgaggatgaggacgagaggccgttctatgttctatcggggacacagttc
cagaagtggaatttatctcaggctgtcacagagaagcttttctatcagattgatgtggag
agaatgtttagagaattcctgtccaagaaggtttggaaccaggattcgcgccagttaaca
cagctaaaaacctggcttttggacatgcggacaacccaacaaggagttgtctttcttggg
gcaggagtcaacatggatgttgatctgactgtgcactttggattggccttcctcgacacg
gacataaacggaacacccagcgaattggagagtttgatgattctggatcatcaggacaca
tactcggatgattttgagtacagccttcagaagtacaagctgctactggctgacccaatg
acgaccacggcgtatgtctacaatagagaccacgtcctatttataccaggtccctccaca
gaagtcattaacctacaacagcctgggggtcacattctgggggcaggttcctgtgatggg
acgggtgtgttcttctctggcagtatggggctgttctccatcagcagtcctcagaaacag
gaagtgagtataatggaggagccctctcaggacatgaccacagcagacatgtctgtactg
accgccagccatgccaaaatgcaggaattgtcgatgagtgaagacagaacagctcgtctc
aagtcagcatttattgctaccatgaggggcaatattgctgctgctcagtccaccattgat
gagttatttccccctgatgaagtgtcgacagacttagatcagactgtggtcgcccttgac
aaagatcttgtgaatgattttccagctgcagatccacgttgggcagagtccagacaagat
gccaccagcagcaccacatctctgatcatcatcaaccagctcaacgacaaactccgtgct
catgaatacgtcatcaacttcctgaaaaagatgaacctatggaaacagctaaaccaggtc
aatgtacgagacaccagaatgcttactagacacgtgatgtgtgaacacgcggagaagctt
caggctgccatcgcgctgcgtcagctacatgtagagtttactggtatagtggatgctgcc
attaagaaagtgttagaaatgagacgggacgtcaacatctccctcaatctgaccccacaa
gatgtcttctacagagaggtgtcacggatacaggaagtggtggagtgtttgttggaacat
caggaagaggtcctcctggcagatgtcaccgtcacagaaattctaacggtcataacgtcc
atcaacacgctactagaggacattcttcataaagctctgcagtatcggcagacaaagtcc
tcgatgtatgactgtgaggcgccccctggggaagttcccgagtatgtaccatggacctcc
acgagcggggatcacggcatcagaacattccttcttaaacagttcaacaagacaatggag
atagtgattcccgaggtccgagaccccgagagtcaggagaagatataccagcagctggcg
tcgatcgcagatatcatcctggacggttacgtcagccagttagagtccctgaaaaataat
gtctccaaacaacagcactataacgaattacagcgacgctacgaacaggacagacaacag
ctgatcctgccgatgatgaagggaaagcagtacgagctggcagcatctctggcagagaag
tactatgattttgagatcctaattcagctgtgtgaattgtcagacaacaaagaaagaata
gagaaatatctccaccagttctcacacaagggatttgccaattacctgtatacttggtac
atgaaagaaggtaagaggggacgtctcttggccttgccagtcggtcaacagagagagctc
ggacgatttctacagaaagaggacatcaagacactcagctggcttcacaacatccagacc
aacaacttctcgaaggcacacagtacccttttggagctggctagaattgagcaggactct
ttagcaaagaaaaagacacttttgagtctgagtaaattgtctggtctggcagctgacccg
gataatggagaaattgacagcaacattctagatatcaatgaagaacaggagttgattgct
caccaacagcagttacctgcccttgtcatagagaatcttggcatggagccaaacaacatg
actgtcctctcccctgttcagctaatagagttgtacatttctggaacaaacattgacgcc
acagaatacgatttcaagaaagcgctagatcttcttcagtacatagacaagactgaccca
gctctggactttgagagtttgaggatgcacatctgggcccagtcaattctcagggacagc
tggcaacaagacgagtctgtggatgtgatggagactgtcatgaacacggtcttctttaaa
acggtggacttggcttataaagagggagtggatgtgaggaccttcatgcctggattaagg
aacattttactttgtgatgaacttggagatctgaaggaggattcaaacttccagtattta
atacaagcaggatatgaacatattggtcaagtgctttga
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