Ostrea edulis (European flat oyster): 125650811
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Entry
125650811 CDS
T09123
Name
(RefSeq) serine/arginine-rich splicing factor 4-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125650811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oed03041
]
125650811
Spliceosome [BR:
oed03041
]
Common components
Common spliceosomal components
SR proteins
125650811
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
Nup35_RRM_2
SET_assoc
Motif
Other DBs
NCBI-GeneID:
125650811
NCBI-ProteinID:
XP_048735301
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All DBs
Position
5:complement(77392513..77408039)
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AA seq
294 aa
AA seq
DB search
MGTRVYIGHLSYHARERDVERFFKDYGRIRDVMLKNGYGFVEFDDYKDADDAVYELNGKE
LCGERVSIEHARGTVRGGGGGGGGGYRGDSHYRDSSYNRKPMWIDKYGPPTRTDYRLIVE
NLSSRVSWQDLKDYMRQAGEITYADAHKQHKNEGVVEFATYSDMKKAIDRLDGTEINGRK
IRLVEDKPKRSRRDSRSRSRSRSRRRRSRSRSRSRSRSRSHKRRASSRSRSRSKSRSQSR
SRSRSGSRDRSKSKSRSKSRSKSKSRSKSRSPSRSKSRSKSPVKEDEAEGREEN
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgggaactagagtatacatagggcacctttcctatcatgctagagagcgagatgtggaa
aggtttttcaaggactatgggagaatccgagatgttatgttgaaaaatggttacggcttt
gttgagtttgatgactacaaggacgcagatgatgcagtgtatgaattgaatgggaaggaa
ctctgtggagaaagagtgtctattgagcacgctcgaggcaccgtccgtggcgggggcggt
ggtggtggtggtgggtaccggggagacagtcactaccgggacagcagctacaacaggaaa
ccaatgtggattgacaagtacggcccaccaactagaacagattatagacttattgtggaa
aatctctcctcacgagtcagttggcaggacctcaaagactacatgagacaagcaggggag
attacctacgctgatgctcacaaacagcacaagaatgagggggttgtggagtttgccacc
tattcggatatgaaaaaggctattgatagattggatggaaccgagattaatggcagaaaa
attcggctggttgaggacaaacccaagagaagcagaagagactcaagaagccgctctaga
tcaaggagcaggaggaggagatccaggagccgttcaagaagccgatccagaagtcgatcc
cacaagaggagggcatcttcaagaagccgaagtagaagcaagtctcgcagccaaagtcga
tccaggtccagatctggatcaagggacagatccaagtccaaatcaagatccaagtccagg
tctaagtccaaatcaagatccaagtccaggtcgccctcaaggtccaaatcaaggtcaaag
tccccagtcaaagaggatgaagcggagggaagggaggaaaattga
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