Ostrea edulis (European flat oyster): 125651433 Help Entry 125651433         CDS       T09123                                  Name (RefSeq) symplekin-like isoform X1   KO K06100   symplekin Organism oed  Ostrea edulis (European flat oyster) Pathway oed03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:oed00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     125651433  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:oed03021]     125651433    03019 Messenger RNA biogenesis [BR:oed03019]     125651433 Transcription machinery [BR:oed03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      125651433 Messenger RNA biogenesis [BR:oed03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      125651433     U7-dependent histone pre-mRNA processing factors      125651433 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N Adaptin_N SPG48 INTS1_R4 CoV_NSP2_N Motif Other DBs NCBI-GeneID:  125651433 NCBI-ProteinID:  XP_048735970 LinkDB All DBs Position 5:complement(3860682..3885658) Genome browser AA seq 1290 aa AA seqDB search MTEESRRSTAAQFFMDEENTHTASVSTYDKVVELVNQASLVQKDTQKINILRQVQELIIH KDPTLLDNFLDEMLAFQSDRSAEVKKYVITFMEEACKKDPELLNKMLPCLQILLQDDSVN VQKKVILSLPQVYKVIIKWLAKAKTITEERSFVWETMKSLKNRMFELIDSENDGIRTHVV KFMEGVILVLSRKTAESEMPKSSKPEADVTLEIVPEDNKILKLKRLEEQGKQMFDTLLQF QASPHISSINLMTVMGSLTTIAKQRPFFFGKVVQSFETLQVNLPPTLAKSQVSSVRKNMK MHMLSLLKHKASVDYITQITTLLTDLGATNSEVMKNMPKIDESRKRKAEEPGGSTKKAKI EAEMELDDDDAGMTPFVDRSKVKAPATLKQRQTAVDITAEDIIPRLNPQNVADLVLISMV MLPDQLPPHFQATYTPIAAAGTEGQIKHMGRLLANQLTTAGMGKGIAEVQLEEASEEDGG ASPEYQPTSPKQVIQTVVGGLTEPLAASSSKMANVPAAPQIRSVRTGIKQFKLSSVTTDM DRDKLDEMTIASVKRILEAEKSASLGNALSARTKLLTSLVSQFGGELKNLLLEYIFDDLR NRADLAFAWLYQEYANCQGFCASNLRNERSSLASYDECLTRLLSGLLDRTELGTKEGFFH RLILEAPAITDNAIQILKKYCTDKERVESGINTLRQLILTRPAHRLRYLEVLLMSCHHDM PDVRATAIRCSKQLYEKGHIRPYIEQYASKMLKNLLLTKPPTEMLGKSKNDPALQMWTED TIKMCLFLYLGLLPNNHKLIHQLAMVYTSAGADIKRIILRALENPVKGMGMKSPELLTLV ESCPKGAETLVTRVIHILTDKASPSPELVERVRDLYHKRVPDVRFLIPVLTGLSKDEVIQ ALPKLIKLNPIVVKEVFNRLLGGHSDANYTSPLTPVDLLIALHNIDPAKCDMKTIIKATN LCFSEKNIYTQEVLAVVMKTLMEQEPLPTLFMRTVLQSLSMYPRLMGFILNILQRLISKE VWRNKKVWEGFIRCCQKMKPQSFAVLLQLKSAQLKSVFESCPDLREPLLNHVNSFAPNQK AHLPKSVIAVLESPPDLTPTLSQLEVVPATPVPTPLTPTVLTPSAPQVTAVKVENNPVPM ETQSIQTVQSIQTISSVLVQVKQEPPEAEDLTRQVTENRERRESQGRALSESERKETPSR KRLTKKRSTEDKAEADMDEMDSPEDALAIAEEAMDTSVTSDLQADKSQESAGATSAKTTR TRSKTSESRSSGSRSSEVETRPRRSTRSRK NT seq 3873 nt NT seq  +upstreamnt  +downstreamnt atgacagaagaaagcagaagatctactgcggcgcagttcttcatggatgaggaaaatacg cacacggcgtctgtatctacatacgacaaggtggtagaacttgttaatcaagcttcactc gtgcagaaggatacacagaaaatcaacattctaagacaggtccaggaattaataattcat aaagatccaacattattagacaacttcttagatgaaatgcttgcatttcaaagcgaccga tctgctgaagtgaagaagtacgtcatcacattcatggaggaagcgtgcaaaaaagatcca gagttgttaaacaagatgctgccttgtctccagattctgctacaagatgacagtgtcaac gtacagaagaaagtcattctgtctctcccacaagtctacaaagtcattataaagtggcta gctaaggcaaaaactataacggaggagaggtcgtttgtgtgggagacaatgaagtcgcta aagaacagaatgtttgagctgatagactcggaaaatgatggaataagaactcatgtcgtc aagttcatggagggagtcatcctagtattatcccggaaaacagcagaatctgagatgcca aaatcttccaagcctgaagctgatgtaacattggaaattgttccagaagataacaagatc ctgaaactgaagcgtctggaggagcagggaaaacaaatgtttgacacactcctacagttc caagcatcgcctcacatatccagtataaatttaatgacagtcatgggaagcttgaccacc attgccaaacagaggccattcttctttggaaaagttgtgcagtcttttgaaactctacag gtgaatctaccacccaccctggcaaagtctcaagtgagcagcgtccgtaaaaatatgaag atgcatatgttgtcgctactgaaacacaaggcatctgtggattatatcacgcagattact actcttcttacggacttaggggccacaaactcagaggtaatgaagaacatgccaaagatt gacgagagtaggaagaggaaagcagaggaacctggggggtccacaaagaaagccaagatt gaagcagagatggagttggatgacgatgatgctgggatgacaccttttgtggaccgttct aaagttaaagctcctgccacattaaaacagagacagacagcagtagacatcacagcagag gacatcatcccccgtctgaatccgcagaatgtcgcagatcttgtcctcatcagcatggta atgttgccagaccaacttcctccccactttcaagcgacgtacacccctattgctgcagca gggactgagggacagatcaaacacatgggtagacttctggccaatcaactgaccacagca ggaatgggaaagggtattgcagaggtccagctagaggaggcttccgaagaggatggggga gcatctccggagtaccagcctacatctcccaaacaggttatccagactgtcgtaggtggt ctgactgagccgctggcagcctcatcctccaagatggccaacgttccagcagctccccaa atccgttccgtgaggacaggaatcaagcagttcaagctttcatctgtaaccacagacatg gacagggacaagctggatgaaatgaccattgcctcagtgaagagaattttagaggctgag aagagtgcatctttaggaaatgccctttcagccagaaccaagttgctcacgagtttggta tcacagtttggaggagaactgaaaaatttgttactggagtatatatttgacgatcttcgt aatcgggcggatctagcatttgcatggttgtatcaagagtatgcaaactgtcagggattc tgtgcatccaatctgcgaaacgagcggtcatccttggcaagttacgacgaatgtctgacc aggcttctgtcgggcctgttggatcggacagaactcggcaccaaagaaggattttttcat cgtttgattttggaggctccagctatcacagacaatgcaattcagatcctgaagaaatat tgtactgacaaggagcgagtggagagtgggattaacactctacgtcagctgatcctcacg agacccgcccaccgactgcggtacctggaggtcctactgatgtcctgtcatcatgacatg ccagatgtcagggccacggccatccgctgcagtaaacagctgtatgagaagggacacatc agaccctatatagagcaatatgcctcaaagatgttgaagaatcttttgttaacaaaacca ccaacagaaatgttaggcaaaagtaaaaatgatcctgctttacaaatgtggactgaggac accattaagatgtgtctgttcctgtacctcggcctgctacctaacaatcacaagctcatc caccaattagccatggtgtacacctctgctggagcagacattaagagaatcatcctcagg gcgctagagaatcccgtgaagggaatgggaatgaagtcaccagaactgttgacactagtg gaaagctgtcctaaaggagcagaaacattggtcactcgagtcatccacatcctcactgat aaagcttctccatcccctgagctggtggagagagttcgtgacctctatcataaacgcgtg ccagatgtcagattcctgatacctgttctcacaggactctcaaaggatgaagttatacaa gccttgccaaaactgatcaagttgaaccccattgttgtcaaggaagtattcaaccgtctg ctgggtggtcatagcgacgctaattacacatctcctctcaccccagtggatctgttaata gcgctgcacaacatagacccagccaagtgtgacatgaaaacaatcatcaaagccaccaat ctgtgctttagtgagaagaacatctacacacaggaggtcctggctgtggtgatgaagacg ctgatggaacaggaacctctgcccacgctcttcatgaggacagtcctccagtctctgtca atgtatcccagactgatgggattcatcctgaacatcctgcagaggctcatttctaaagag gtatggaggaataagaaagtttgggaaggatttatccgctgttgtcagaagatgaagccc caatcctttgcagttttactacagctgaagtccgcccagctaaagagtgtgtttgagagc tgtccggacctccgggagcctctgctgaatcatgtcaactccttcgctccgaatcagaaa gcccacttacccaagtccgtgattgcggtgctggagagcccgcccgatttgacccccacc ctgtcgcagttggaagttgtgccagccacgcctgtccccactccgcttactcccacggtc ctgacaccctcagcaccacaagttactgcagtgaaggtcgaaaacaaccctgttcccatg gagacgcagtccatacagacggtccaatccattcagactattagctcagtcttagttcag gtgaagcaagagccccctgaagcggaagacctgaccagacaggtaacggaaaacagagag cgacgggagtcacagggcagggcgttatcagagagtgaaaggaaggaaacaccatccagg aaaagattgactaaaaagaggtcaacagaggataaagctgaggctgacatggatgagatg gactcccctgaggatgccctcgctatcgcagaggaggccatggacacatctgtcaccagt gacctgcaggccgataagtcacaagaatcagcaggcgctacctctgcaaagactacaagg accagatcgaagacatcggaatccaggtcatcggggtcaaggtcatctgaggtcgagact cgacccagaagaagtacaaggtctcggaaataa

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