Ostrea edulis (European flat oyster): 125651659
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Entry
125651659 CDS
T09123
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04120
Ubiquitin mediated proteolysis
oed04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125651659
04120 Ubiquitin mediated proteolysis
125651659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125651659
Enzymes [BR:
oed01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125651659
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125651659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-ANAPC11
zf-RING_5
Prok-RING_4
zf-RING-like
zf-Nse
FANCL_C
zf-RING_Vps41
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
125651659
NCBI-ProteinID:
XP_048736312
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Position
5:complement(78598290..78612207)
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AA seq
601 aa
AA seq
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MKTLLVTGLSFVLSGAVIGNAYYQKKQFYPSVVYITKSNPSMAMLYIQAFVFIILMGKVM
RKVFFGSLRPAEVEHLIERSWYAVTETCLAFTVFRDDFSPKFVALFTLLLFLKCFHWLAE
DRIDYMERSPVISVLFHIRALTLLALLGVLDLYFINHAYYSTLTKGASVQLVFGFEYAIL
MTIIAMTFMKYILHSIDLQNENPWDNKAVYLLYTEVVLGAVKVVLYMAFMVIMIKVHTFP
LFAIRPMYLSMRGFKKALHDVIMSRRAIRNMNTHYPDATEEELQVDDVCIICRETMVTAA
KKLPCNHIFHTSCLRSWFQRQQTCPTCRRDVLRTTPITPQATPPPQPAQPQPPQNMFGGL
AGMPGVPPQMWPQPPVPPQQPNPAQMGNNTPVSQTTTSTGNVSSTFTPPSVSTSTTAATG
LPAGMGSLPTGVPPMMPMFPLMMPFGMPRPPANLSELSAEDLRRIEGQERENVEARIQWL
RDIQALMDGAMVMISQYNTVAAQLSTPVINTNNSPTNTSQEAKPKTESTEAKAEIKTEPS
ESDLNYDGLEGATGYTPPKEEEIPQWEDPSKEEHEDEMHEVRRRRLQKFAQEQNQTSDST
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgttacttgtaaccgggctcagttttgtgttaagcggtgctgtaattggaaat
gcctactatcagaaaaaacaattctacccttcagttgtctacatcacgaaatcaaatccc
agtatggcgatgttgtatatccaagcctttgtgttcatcattctcatgggaaaagtaatg
agaaaagtattttttgggagccttcgtccagcagaagtagagcatctgatagaaagatca
tggtatgcagttacagagacctgcttagcatttacagtatttcgtgatgatttcagtcca
aagtttgtagccctcttcacacttctgttgttcctaaaatgtttccactggttggctgag
gacaggattgactatatggagagaagtcctgtcatatcagtattatttcacatccgagca
ttaacactgttagcgttactaggcgtgctggatctctactttataaaccacgcttactac
agtactctcactaaaggtgcctcggtccagctggtgtttggtttcgagtatgccatcttg
atgactataatagcaatgacgttcatgaagtatatcctgcactctatagacttacagaat
gagaatccctgggacaacaaggctgtatacctgttgtacacagaggtagtcttaggtgct
gtaaaggttgtgttatacatggcatttatggtgatcatgatcaaagtccatacattcccg
ctgtttgccatcagacctatgtatctctccatgaggggattcaagaaagctctacacgat
gttatcatgtcaagaagagctatcaggaacatgaatacccactatcctgatgccacagag
gaggagcttcaggttgatgatgtctgtatcatttgtcgggaaaccatggtaacggctgcc
aagaagttaccttgtaaccacatcttccataccagctgtctgcgatcatggttccagaga
caacagacttgtcctacatgtaggcgggacgtactgagaacgacgcccatcacaccacag
gcaacgccccctcctcaacctgcacagccccagcctccacaaaacatgtttggtggtctg
gctggtatgccaggagtcccccctcaaatgtggcctcagccccctgttcctccccagcaa
ccaaatccagcacaaatgggaaacaacaccccggtgtcacagaccaccacctccactggt
aatgtctcctccactttcactccgccatctgtatccacatcaactacagcagctacaggc
ctgcccgctggaatgggcagtctgccaacaggtgtgcctcctatgatgcccatgttccct
ctcatgatgccttttggcatgccccgtcctcctgccaacctgtctgagctctcagcggag
gacctcaggaggatagagggacaagagagagagaatgtggaggccaggattcagtggctg
agggatattcaggcattaatggatggagctatggtgatgatcagtcaatacaacacagtg
gcagcacagctgagcactcctgtgataaatactaataattcacccacaaatactagtcag
gaagcaaagccaaagactgagagcacggaggccaaagcagagataaaaacggagccatca
gagtcagaccttaattatgatgggctagagggagccacaggatacacgccccctaaagag
gaagagatcccacagtgggaggacccctccaaagaggaacatgaagatgaaatgcacgag
gtccgacgacggaggctgcagaagtttgcccaagaacagaatcagacatcagactcaacc
agctaa
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