Ostrea edulis (European flat oyster): 125652099
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Entry
125652099 CDS
T09123
Name
(RefSeq) RNA-binding protein lark-like
KO
K13187
RNA-binding protein 4
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oed03041
]
125652099
Spliceosome [BR:
oed03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125652099
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_2
RRM_occluded
zf-CCHC_3
RBD_DEAH11
zf-CCHC_5
RNA_bind
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
125652099
NCBI-ProteinID:
XP_048737030
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All DBs
Position
5:22684301..22694986
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AA seq
232 aa
AA seq
DB search
MPPPISTKLYIGNLPETCRKADLQKMFEAYGSVVECDIVRNYCFIHFENPDEAKMAQANL
DGVEFEGIKLKVEMSHSKVRQKPGMGGKGECYRCGKEGHWSKDCPKGPSRGKPRGPEPPY
RDPYRDPYDPYYRERYLPPPPPHDRYRPYPEPYDRRPLPPPPPRDPYYRERDPYSRPPPE
YYGRRSPPPPPIRPREDPYYDSYYPRRSSYPMPPPPGTNRLSPPRSRVPAPY
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaccaatatctacaaagctgtacattgggaatctacctgaaacatgcagaaag
gctgacctacagaagatgtttgaggcatatggatcagttgtagaatgtgacattgtcagg
aattactgttttattcactttgaaaatccagatgaagcaaaaatggctcaagcaaatcta
gatggtgtggaatttgaggggattaaattaaaagtggagatgtctcacagcaaagtaaga
caaaagcctggaatgggagggaaaggggagtgttacagatgtggaaaggaaggacattgg
tcaaaggattgcccaaagggaccatcccgtggaaagccccgaggacctgagcccccatac
agggacccctacagagatccctatgatccttactacagggagaggtacttgcctcctcca
ccaccacatgacagatacaggccttacccagaaccctacgacagaaggccactcccccct
ccaccaccaagagacccatactacagagagagggacccatatagtagaccacccccagag
tattatggacgtcgatcaccccctccccctccaataagaccaagagaagatccatattat
gattcatactatccaagaagaagcagctaccccatgccaccacccccgggaacaaatcgc
ttgtcgccacctcgcagccgcgtcccggcaccatattga
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