Ostrea edulis (European flat oyster): 125652514
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Entry
125652514 CDS
T09123
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125652514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125652514
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125652514
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Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
125652514
NCBI-ProteinID:
XP_048737715
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Position
5:complement(52100536..52108171)
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AA seq
559 aa
AA seq
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MSAHNLAYQTGQGLRYDGKELLPRRISNQNVVYRLFHRQTHAPRPGTHFHQVRSLYTNVF
PNYTVVNVEKPPCFLRKFSPDGKYFIAFSSDQTSLEIYSFQGSAAAEDLLQNVHGDFMSL
NNDQASVNIRSKLFGRFFKLRHKTLVAKNGEQLNRECSLFTDNGNYVIVGSAMNIPEDPH
PLFHDIYQNNESMSPNHKYQLEDYSLHIIDLETGILCDTRQFKFDKIFLSHNQGLYLYKN
TLAILSVQQQTIHIFHVTPTGKFVDVRSIGRFCYEDDQLFFSQGNKRNSGQVVRPYTEQT
INSLKHRLMVFLFHRAQGEGTSYALRRFYQYFDQFKVLRMWKMQLLDENHLLIKYASEDV
VTLKCQDPNSQPSFFVVYNMMTTEVLAVFENTSDKLLELFENFCDLFRNATLHSESQFPC
SASSNIHARQIQQRFKHTIINAKFGGHTEAVKRLLAQLPISSQSYSSSPYLDLALFSYDD
KWVSMMERPKACGDHPIRFYARDSGLLKFKIYAGMLGKNPSPTARRLVAFTFHPSEPFAI
SVQRTNAEYVVNFHVRHCF
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccataacttggcttaccaaactggacaaggactacgatatgatggaaaagaa
cttcttccaaggcgtatcagcaaccagaatgttgtatataggctatttcatagacagaca
catgccccccgccctgggactcacttccatcaagtgcgatcactatacaccaatgttttc
ccaaattatactgttgtgaatgtagagaagccaccatgctttcttagaaagttttcacca
gatggaaagtacttcattgccttttcttctgaccaaacatcactggagatctactctttt
caggggtctgctgctgcagaagacttgctacaaaatgtccatggagatttcatgtcgctg
aacaatgaccaagcatcagtcaatattcggtccaaactctttggccgattttttaaactg
agacataaaacactcgtcgctaaaaatggagaacagttaaacagagaatgcagtctattt
acagataatgggaactatgtcatagttggatctgccatgaacattcctgaggaccctcat
cctttatttcatgacatttatcagaataatgagtccatgtctccaaaccacaaatatcaa
ctggaggactattccctgcatataattgacttggagacagggatattgtgtgacacacgt
cagttcaaatttgataagattttcctctctcacaatcaaggattgtacttgtataagaat
actctagccattttatcagtgcaacaacagacaattcatatcttccatgtcactcctacg
ggaaagtttgtggatgttagaagcattggaagattttgttatgaagatgaccagctcttc
tttagtcagggaaacaaaagaaattctggtcaagttgtcaggccctatactgagcagacg
atcaattctctcaagcacaggcttatggtcttcctttttcacagggcacagggagaaggc
acctcctatgcactccgcagattttatcaatattttgatcagttcaaagtgttaagaatg
tggaagatgcagcttcttgatgaaaatcatctgttgatcaaatatgctagtgaagatgtt
gtaacattgaaatgtcaggacccaaactcccaaccttctttttttgtcgtatacaatatg
atgacaactgaagtgctagctgtctttgaaaatacctcagataaactcttagaactcttt
gaaaatttctgtgatttattcagaaatgctactctacacagtgaatcccaattcccatgc
tctgcttcaagtaacattcatgcacgtcaaattcagcagagatttaaacacaccattatt
aatgctaaatttggaggccacactgaagcagtgaagagacttctggctcaacttcctatt
agttcgcagtcttacagcagcagtccatatttggacctagctctcttcagctatgatgac
aagtgggtgtccatgatggagagaccgaaggcctgtggtgatcacccaatcaggttctat
gccagagattcaggtttgctgaagtttaagatctatgcaggaatgctgggtaaaaaccct
tctccgactgctcgtcgtcttgttgctttcacatttcaccccagtgaaccatttgccatt
agtgttcagaggaccaatgcagaatatgtggtcaactttcatgtcaggcattgtttctga
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