Ostrea edulis (European flat oyster): 125652710
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Entry
125652710 CDS
T09123
Name
(RefSeq) alpha-actinin-like isoform X1
KO
K05699
actinin alpha 1/4
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04517
IgSF CAM signaling
oed04518
Integrin signaling
oed04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125652710
04518 Integrin signaling
125652710
04519 Cadherin signaling
125652710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125652710
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oed04812
]
125652710
04147 Exosome [BR:
oed04147
]
125652710
Membrane trafficking [BR:
oed04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125652710
Cytoskeleton proteins [BR:
oed04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125652710
Exosome [BR:
oed04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125652710
Exosomal proteins of colorectal cancer cells
125652710
Exosomal proteins of bladder cancer cells
125652710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CH
Spectrin
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAMSAP_CH
STB2_C
Motif
Other DBs
NCBI-GeneID:
125652710
NCBI-ProteinID:
XP_048738035
LinkDB
All DBs
Position
5:complement(50844254..50888179)
Genome browser
AA seq
888 aa
AA seq
DB search
MSDQDYDGYMEGEEEWDREGLLDPAWEKQQKKTFTAWCNSHLRKAGTQIENIEEDFRNGL
KLMLLLEVISGEQLPKPDRGKMRFHKIANVNKALDFIASKGVRLVSIGAEEIVDGNPKMT
LGMIWTIILRFAIQDITVEELTAKEGLLLWCQRKTAPYKNVNVQNFHLSWKDGLAFCALI
HRHRPELLDYYKLSRDNPLENLNTAFDVAEKHLDIPRMLDPEDMVNSVKPDERSVMAYVS
SYYHAFSGAQQAETAANRICKVLKVNQENERLMEEYERLASDLLEWIKKTTPWLENRTTD
NTLPGTQRKLEEFRDYRRKHKPPKLEDKARLENSFNTLQTRLRLSNRPAYLPTEGKMVSD
IANAWKGLEFAEKGFEEWLLSELQRLERLDHLAQKFRHRCQIHEEWAEGKEDMLQSQDYL
RCGLNQLKAMKKKHEAFESDLAAHQDRVEQIAAIAQELNLLEYHDVHTVNTRCQSICDQW
DRLGTLTAQRRQGLDEAEKILEKIDTLHLDFAKRAAPFNNWLDGAKEDLLDIFIVHTVEE
IQQLLEAHETFKQTLPEADKEFNAIMALASEVQRLANQVGLQLTDNPYTTVDPQDIANKW
ADVKQLVPKRDGTLQNEMMKQQNNMRLRKQFAAKANVVGPWIENQLDAVASMGIQTKSSL
EEQLKKLRQYEQATAQYKPNIDELERYNQEIQEAMIFENHYTQYTMETLRVGWEQLLTAV
ARNINEVENQILTRDSKGISEDQMNEFRVSFNHFDKNRTRRLEPKEFKACLVSLGYNIRD
DRQGDADFQRIMSIVDPNNSGYVTFEAFLDFMTRETADTDTAEQVMQSFKILAGDKPFIT
AQILRQELPPDQAEYCIQRMAPYSGRDAVPGALDYMSFSTALYGESDL
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcaggattatgatggatatatggagggagaagaagaatgggacagggagggt
ttactggacccggcatgggaaaaacagcaaaagaagacattcacagcatggtgcaattcc
catttaagaaaggctggtactcaaatagaaaacatcgaggaggattttcgaaatggttta
aaattgatgttattattggaagtgatctctggagaacagctccccaagccagacagggga
aagatgaggttccacaaaattgcaaatgtcaacaaagctttggacttcattgcatctaaa
ggtgtcagactggtttccattggtgctgaagaaattgtggatgggaatcccaagatgact
ctgggtatgatctggaccattatccttcgttttgccattcaagatattacagtggaggaa
ctgactgctaaagagggactcctcctttggtgccaacgtaaaacagccccatacaaaaat
gtcaatgtgcagaactttcatctcagttggaaagacggtctggcattctgtgcgttgatt
caccggcatcgtccagaattattagactattacaagttatccagggacaacccattagag
aatttgaatactgcattcgatgttgcagaaaaacatcttgatattccacgcatgttagat
ccagaagatatggtgaactcagtaaaaccagatgagcgttctgtgatggcctacgtttct
tcatactatcacgcattttcaggggcacagcaagctgaaacagcagcaaacagaatttgc
aaagtgttgaaggtcaaccaggaaaatgagcgtctaatggaagaatacgaaaggctagcc
agtgatcttttggaatggatcaagaaaaccacaccatggctagaaaacagaacaaccgac
aatactttacctggaacccagagaaagcttgaggaattccgggactacagacgtaaacac
aaacctcccaaattggaagataaagcacggcttgagaacagctttaacaccctgcagaca
aggcttcgactcagtaacaggccagcctacctccccactgagggtaaaatggtgtcggat
attgctaatgcttggaaaggtttggaatttgctgagaaaggtttcgaagagtggttactc
tcagagctgcaaagactagagcgtcttgatcatttagctcagaagtttaggcaccgttgt
caaattcatgaagaatgggctgagggcaaagaagacatgcttcagagccaggactatctt
agatgtgggcttaatcaattaaaggctatgaagaagaaacatgaggcttttgagagtgat
ttagcagctcaccaagacagagttgagcaaattgcagcaatagctcaggagctgaatctt
ttagaataccatgatgttcacacagtcaatactagatgtcagagtatctgtgatcagtgg
gatagactaggaactttaactgctcagagacgacaaggtcttgatgaagcagaaaaaata
ctagaaaaaatagatacccttcatctcgactttgcaaaacgggcagctcctttcaacaac
tggttagatggtgcaaaagaagatttattagatatatttattgttcacactgtagaggaa
attcagcaacttttagaagcacatgaaacatttaagcagaccctgccagaagcagataag
gaatttaatgccattatggctttggcctctgaagtccagaggctggctaatcaagtgggc
ttacagctgacagataatccctacaccacggtggatcctcaggacatagctaataaatgg
gctgatgtgaagcaattagtgccaaaacgagacggcactctgcagaatgaaatgatgaag
caacagaacaacatgagactgaggaaacagtttgctgctaaggctaatgtggtgggtccg
tggattgagaaccagctggacgctgtggcttccatgggaattcaaaccaagagctcactg
gaagaacagctgaaaaaactaaggcaatatgagcaggctactgcccagtacaagccaaac
attgacgagctggaacgatataaccaggaaattcaggaggctatgatctttgaaaaccac
tatacacaatacaccatggagacattgcgagttggatgggaacaacttctcacagcagtt
gccaggaatatcaatgaagtggaaaatcagatcctaacaagggattctaagggtatcagt
gaagaccaaatgaatgagttccgtgtttctttcaatcatttcgataagaacagaacacgt
cgtcttgaacctaaagaatttaaggcctgccttgtcagtttaggatacaatattcgtgat
gacagacagggagatgctgacttccagcgtatcatgtccattgtggaccccaataactcc
ggctacgtgacctttgaggccttccttgacttcatgacccgtgagactgctgacactgac
acagctgaacaggtcatgcaatcgttcaaaattctggctggagacaagccatttatcaca
gcacagattcttcgacaagaactgcctccagatcaggcagaatactgtattcagagaatg
gcgccatattcaggacgtgatgctgtcccgggtgctttagattacatgtcattctccact
gctctgtatggtgaaagtgacctttga
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integrated database retrieval system