Ostrea edulis (European flat oyster): 125653323
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Entry
125653323 CDS
T09123
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oed03400
]
125653323
Enzymes [BR:
oed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
125653323
DNA repair and recombination proteins [BR:
oed03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
125653323
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
125653323
NCBI-ProteinID:
XP_048738707
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Position
7:57536619..57561686
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AA seq
522 aa
AA seq
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MKVLTWNINGIRASKVKLSSLFDSLDADIICLQETKVTRDMLDEPTAIVEGYNSYFSFSK
KRSGYSGVATFCKSSATPIQAEEGLYKDLNPKQDGKLGHYGDVSEFSCNELEALDAEGRA
VITKHKIRKHDGQEAELAIINVYCPRADPEREDRLLYKLRFFALLQTRAETLLKSGCNVI
VLGDMNVKHKRIDRSEEDENETVTKPSRLWLNQFVWDSDKDSSIPDIDNKEEFAGTTSSV
TGGQFADSFRYFYPDEEGAFTNWCTLTSARETNYGRRLDYIFTNVELAKSDLQDCKIMAE
VEGSDHCPVKAEYVIECIPADRSPALCTKFMPEFCGKQVKLSSFFKKREKVMDNSDIKSN
CNQNYTLSADNNNGKCSLKRPSSIEKIQNQAKKKKVNSCDTKQGSLKGFFLKSSSKKEVI
EADIQEASSDTKNELHTTKKEDKVVNTVTVKSSSANAWKSLLKGPPPPPLCRGHQQPCVL
RTVKKPGPTKGKQFFVCARGEGLSSNPEARCDFFKWVDYKNN
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtattgacttggaatataaatggaatcagagccagtaaagttaaactatcttca
ttgtttgattctctggatgctgatattatatgcctccaagaaactaaagtcacaagggac
atgctggatgaaccgacagcaatagtagagggctataactcatacttctcattctcaaag
aagcgaagtggatattctggtgtggcaacattttgtaaatcttcagcaacacccatacaa
gcagaggaaggtttgtataaagaccttaacccaaaacaagatggaaaattaggtcactat
ggtgatgtgagtgaattttcctgtaatgagctagaggctttggatgcagaggggagggca
gtcattaccaaacataaaatcaggaaacatgatgggcaagaggcagagttagccattatc
aatgtgtactgtcctcgtgcagatccagagagagaggacagactgctctacaaattgcga
ttctttgcacttctgcagaccagagcagagacacttttgaaaagtggctgtaatgttatt
gttcttggagacatgaatgtcaaacacaagagaattgacaggagtgaggaagatgaaaat
gaaacagttacaaagccaagtcggctgtggttgaaccagtttgtgtgggacagtgacaaa
gattccagtataccggacattgacaacaaggaagaatttgcaggaaccaccagctctgtg
accggtggtcaatttgcagattcctttcggtatttttatcctgatgaggaaggggccttc
acaaactggtgcacgttgacttcagctagggaaacaaactatggcagacgcctcgattac
atcttcacaaatgtagaattggcaaaaagtgatctacaagactgcaagatcatggcagaa
gtggaaggatcggatcattgccctgttaaagccgagtacgtcattgaatgtatacctgct
gataggtctcctgccttgtgtacaaaattcatgcctgaattttgtggaaagcaagtcaag
ctctcatcatttttcaaaaagagagaaaaagtaatggacaacagtgatatcaagtctaat
tgtaaccaaaattacacattatctgctgataataataatgggaaatgttcattaaagaga
ccaagtagtattgaaaagatccaaaatcaggccaagaaaaagaaagtgaattcctgtgac
acaaaacaagggagcctgaaaggattttttcttaagtcaagttcaaaaaaagaagttata
gaagccgacattcaagaagccagcagtgatacaaagaatgaattacacacaacaaagaaa
gaggataaggtagtgaatactgtaactgttaaaagtagctcagcaaatgcctggaaaagt
ctcctcaaaggaccccctccccctccactctgtcgaggtcaccagcagccctgtgtgtta
cggactgttaaaaagccagggcccactaaagggaagcagttttttgtgtgtgctagaggg
gagggccttagcagcaaccctgaagcaagatgtgacttctttaaatgggtggactacaaa
aacaattga
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