Ostrea edulis (European flat oyster): 125653842
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Entry
125653842 CDS
T09123
Name
(RefSeq) DNA topoisomerase 1-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oed03032
]
125653842
Enzymes [BR:
oed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
125653842
DNA replication proteins [BR:
oed03032
]
Eukaryotic type
DNA Topoisomerases
125653842
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
HTH_TSHZ3
TssN
Motif
Other DBs
NCBI-GeneID:
125653842
NCBI-ProteinID:
XP_048739471
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All DBs
Position
7:18057684..18073481
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AA seq
504 aa
AA seq
DB search
MPQSTLDAWIHVKRKSPDSSEHLDTPTKKRKRWKESDDGNNEIKWTTLDYPGPVFPPEFK
PLPPTVTMRYQGKPIKLKPKTEECVVLYIKNRDKAKNPKVYDENFWEDWVKVMEPEERDS
IRSFKSCNFRTITHYLKNNKYFKTEQKKMKNIKDKRKTCMVDGFEEDIQNPMVEPPGVFI
GKGNHPKNGRIKPRIVPEMVTVNCSEGTECRPPAGHTFKEIEHNKKVLHLAFWDHKLLQK
KKYVQLRATSSQRGRDDKRKFDVARKMHRERPRLLRLCKSGLCSENNVLVQKYIALYLMI
KSALRPGYPKKPGLSADTKGLCTLTFSNLELSEKNKSYSLRLDFLGKSSIPCTKKIVLSK
SVYQKLKEFEQEKEIDDQIFDLVKAPSLNKFLQKSCRYPQSMKPTLKTFRTFVAGKKFER
KLQEINKEDKNNMIKNYNSALEEVSKILNHTGKNTAKVNYIDPRITVAWCLKWDIPITDV
FTKFQREKFQWAIETKDRKFKFVQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaatcaactttagatgcatggatccatgtcaaacgaaaatctccagactcatca
gagcatttagatacacctacaaagaagagaaaacggtggaaagaaagtgatgatggaaat
aatgaaataaaatggacgacacttgattacccgggaccggtgtttcctccagagtttaaa
cctctacctccaactgtgaccatgagatatcaaggaaaaccaataaaactgaagccgaaa
acagaagaatgtgtcgtcttgtatattaaaaatcgagataaagctaaaaatccgaaagtt
tacgatgagaacttttgggaagattgggtcaaagtcatggaaccagaggagagggacagt
attcgaagcttcaaaagttgcaactttagaacaattacacattatttaaagaacaacaaa
tattttaagaccgaacagaaaaaaatgaaaaacataaaagataaaaggaaaacgtgtatg
gtagacggctttgaggaagacatacaaaatcccatggtggagcccccgggtgtattcatt
ggaaagggaaaccacccaaagaacgggagaataaagccgagaattgttccggagatggtt
accgtgaactgcagcgagggcactgaatgtcgacctcccgctggtcacacctttaaagaa
atcgaacataataagaaggttctacaccttgcgttttgggatcacaaacttttacagaaa
aagaaatatgttcaattaagggcgacatccagtcagagaggccgggatgacaaaaggaag
ttcgatgtagcaagaaaaatgcacagggaaagaccacgcttgttaagactctgtaaatcg
ggtctttgttccgaaaataatgtgctggtccagaaatatatagcgttatatttaatgata
aagtctgccttacgacctggttatccaaaaaagccagggttaagtgcggatactaaagga
ttgtgcactctgacattttcaaatttagaattgtcggagaaaaataaatcttactcgctt
cggttagacttcttgggtaaatcgtccataccatgcacaaaaaagatagttctatcaaaa
tcggtataccaaaaattgaaagaattcgagcaagaaaaggagattgacgaccaaatattt
gatttggtgaaggcaccaagtctaaataagtttctccagaaaagttgcagatatccacaa
agtatgaaaccaacattgaaaacgttcaggacatttgttgctggaaaaaagtttgaaaga
aaacttcaagagatcaacaaagaagacaagaacaacatgattaagaattataacagtgca
ttagaagaggtgtccaaaattcttaatcacacgggaaaaaacaccgcgaaagttaattat
atagatccccggattacagtggcctggtgtctgaagtgggacatccccataacggatgta
ttcaccaaattccagagagagaaatttcaatgggctattgaaacgaaggacagaaaattc
aaatttgtgcaataa
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