Ostrea edulis (European flat oyster): 125654580
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Entry
125654580 CDS
T09123
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03083
Polycomb repressive complex
oed04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125654580
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
125654580
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oed01009
]
125654580
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oed03036
]
125654580
03029 Mitochondrial biogenesis [BR:
oed03029
]
125654580
Protein phosphatases and associated proteins [BR:
oed01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125654580
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
125654580
HMT complexes
COMPASS/SET1 complex
125654580
MLL-HCF complex
125654580
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
125654580
Mitochondrial biogenesis [BR:
oed03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
125654580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
125654580
NCBI-ProteinID:
XP_048740512
LinkDB
All DBs
Position
7:complement(86068715..86088009)
Genome browser
AA seq
1559 aa
AA seq
DB search
MAAPILKWKRVTNTTGPCPRPRHGHRAVAIKDLMVVFGGGNEGIVDELHVYNTATNQWFV
PAVRGDIPPGCAAYGFICDGTRILVFGGMVEYGKYSNELYELQASRWEWKRLKPKSCKNG
PPPCPRLGHSFTLLGNKAYLFGGLANDSEDPKNNIPRYLNDLYVLELKPHSNTLSWDFPA
TIGQPPPPRESHTCVGYAEKDGRRPRLIIYGGMSGCRLGDLWQLDIDTYTWIKPVVQGLP
PLPRSLHSANVIGHRMFVFGGWVPLVMDDVKVATHEKEWKCTNSLASLNLETMTWEPLAM
EVFEDSLPRARAGHCCVSIHTRLYIWSGRDGYRKAWNNQVCFKDLWFLETEKPPAPSRVQ
LVRASTNTLEVCWGAVPTADAYLLQLQKYDLPPSQALTPTAIPQTNPLMKAVSTPSAAQP
TVVRTPTPGIAQIRTNTGALGSVTMTSPQTIRVTAVTARQKTPITVNPGAIRVASPQVVT
LPQQRAIMSTSTNQMSGIQALAAAAAATQKITGTTTTPSTPGIKVVTPTIVTPTGVKVTP
IGNQAVKTSTANPATPTVRVATPGATILKSTPGAIQQTIGGKQIITVHKASTGGSSTTGQ
PQIVTLVKTNQGMQVATTKGPLPQGATIVKLVTTQSGGTGKPTAIITTSQPGQTPSTILG
ISSVQPQSSTTKTIIKTIPSSMLSMAKAGTSTATTPGGAKTIVIAAPKGSSGGLTGTPHK
IITSVPKIAGQGNTQFIVVSPQSSVGGAHTITSGGKPIQVTTLQTTSGVTLAGHQIVTAS
HVGKPVVQHGAGGTIVKTIHATPTSLAGSATSLLINTTAGSAPTQSTPTISLITQPSISQ
APVTLTTQTVSATPIQATASGKPVQITITPAAAAATVQPQATVQVTPVVTQPCTDGHNCP
GDENPQPAVCTDGHNCPGDENPQPAVCTDGHNCPGDENPQPAVCTDGHNCPGDENPQPAV
CTDGHNCPGDENPQPAVCTDGHNCPGDENPQPAVCTDGHNCPGDEVDGVPPAAKGQCTDG
HNCPGDENSQSQNVCTDGHNCPGDENQQQSNVCTDGHNCPGDENQQQAGVCTDGHNCPGD
DNQQQSNVCTDGHNCPGDETPQQSNNSCTDGHNCPGDENPDQTAGQQVTSALSDSAIVAP
PTVPLDTHAAVSVSEQVPAILMQEPESKQDSEAMETTPVDAAPQELPQPQEVAPPQEAAA
LTTTMVAAPQAENPPIVPKQEEPMDIGPPTVATLQGGVLTVGPPVVAAPSQPIDTSATDT
DPLATLASAAISSGSAQTSIKQEPGIIAANGIKQEIQEKPETFPKTPTTPVKKEGNQWYD
VGIIKGTSCVVSHFYLSTDAMQAGGNGSDIDVVNVGDVNVLKKQELLPGTAYKFRVAGIN
ACGRGSFSEISAFKTCLPGYPGAPSAIKISKVGGKSTEGAHLSWEPPQNTAGKITEYSVY
LAVRNAAAHVDQKPGAPAQLAFVRVYCGPAPTCTVTAASLASAHIDYTTKPAIIFRIAAR
NEKGYGPATQVRWLQDAQSPAAQKIAVKRTISAQGEGTQVLGAGQVKRLKTDDENEKAM
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccattctgaagtggaagcgggtaaccaatactacaggaccatgtccacgg
cccagacatggtcacagagcagttgctatcaaagatttgatggttgttttcggcggtggt
aacgaaggaattgttgatgagctccatgtttacaacacggccaccaaccagtggtttgta
ccggctgttcggggagacataccaccgggatgtgcagcctatggcttcatctgtgacgga
actcgcattctggtgttcggtggtatggtggagtatgggaaatattccaatgagttatat
gagctacaggcaagccgatgggaatggaagaggctaaaacccaagtcctgtaaaaatgga
cctccaccttgtcccagactaggtcacagttttaccttgctgggaaataaagcctaccta
tttggagggctggctaatgacagtgaagatcctaaaaacaacatacccagatatttgaat
gacctttacgtactggaactgaaaccacattcaaacactctctcctgggattttcccgcc
acaatcggacagccccctccccctcgcgagtcacacacatgtgtaggatatgcagagaaa
gatggaagacgaccacgcttaatcatctatggaggaatgagtggatgtcgtttaggggac
ctctggcagttagatatagacacatacacatggattaaaccagtggtacaaggccttcct
ccattacccagaagtctccactcagccaatgttattgggcatcgtatgtttgtgtttgga
gggtgggttcccttggtgatggacgatgtgaaagttgcaactcacgagaaggagtggaaa
tgtacaaactccctggcctcccttaatctagaaacaatgacatgggagcccttggctatg
gaggtatttgaggactctcttccccgagcccgggcagggcactgctgtgtgtccatacac
acgcgcctgtacatctggagtggcagagacggataccggaaagcctggaacaatcaggtt
tgcttcaaagacttatggttccttgagacagagaagccacccgctccctctcgggtacag
ttagttcgagccagtacaaacactttagaggtgtgctggggggcagttcctactgctgat
gcctaccttctacaactacagaagtatgacttacccccttcccaggccctcacccccaca
gctattccccagacgaaccccctcatgaaagcggtcagcacccctagtgcagcacaaccc
actgtggtcaggacacccactccaggaattgcccagattcgaacaaataccggggcacta
ggctccgttaccatgacatcgccacaaacaattagagtgacagcagtgactgcccgacaa
aaaacaccaatcaccgtaaaccccggagcaatcagagtagcctctcctcaggttgtgaca
ttgccgcagcagcgggccatcatgtccacgtcgactaatcagatgtcgggcatccaggct
ctggcagcggcagcagcagccacacagaaaatcacaggcaccaccaccactccctccaca
cccggcattaaagtagtgacacccactattgtcactcccacaggggtcaaagttacaccc
attggaaaccaggctgttaaaacctcaacagccaaccctgcaacaccaactgtgagggta
gccaccccaggcgccaccattctgaagtctacgccaggggccattcagcagactatcggc
gggaaacaaatcatcacggtccacaaggccagcacagggggctcgtccaccactggtcag
ccccagattgttacgctggtcaagacaaaccagggcatgcaggtggccacaactaagggg
cctcttccacaaggagccaccatcgtaaagctggttaccacacagtcaggtggcaccggt
aaacccaccgccataatcaccacaagtcaaccaggacagacaccatcaacaattctcgga
atcagcagcgtgcagccccagtcatccacaacaaaaaccatcatcaaaactattccatct
tccatgttgtcaatggccaaagcgggaaccagcactgccaccactccgggcggtgccaaa
accatcgtcatagccgcacccaagggcagctctggagggctgacagggaccccccacaaa
atcatcacctcagtcccgaaaatagcgggacagggaaacactcagttcattgtagttagt
ccccagagcagcgtgggcggggctcacaccatcacatctggtggtaaacctatacaagta
accactctacaaacaacttccggagtcacattagcgggtcatcagattgtcacagcatca
catgttggcaagccggtcgtacagcacggagcagggggaacaatagtcaagaccattcac
gccacacccacctctttagccgggtcggccacatctctcctaatcaacaccacagctgga
tccgcccccacgcagtcaactcctacaatctcccttattactcagccttctatttcccag
gcaccggtcactctgaccactcagacagtctcagccactcccatccaggccactgctagt
gggaaaccagtccagatcacgatcactccagcagcggcagcagcaactgtccagcctcag
gccacagttcaagttacacctgtggtcacacagccatgcactgatggacataattgtcct
ggagatgaaaatccacagcctgcagtttgtacggatgggcataattgccctggagatgaa
aatccacagcctgcagtttgtacggatgggcataattgccctggagatgaaaatccacag
cctgcagtttgtacggatgggcataattgccctggagatgaaaatccacagcctgcagtg
tgtacggatggacataattgccctggagatgaaaatccacagcctgcagtttgtacggat
gggcataattgtcctggagatgaaaatccacagcctgcagtttgtacggatgggcataat
tgcccgggtgatgaggtggatggtgttcctccagcagccaaagggcagtgcacggatggg
cataattgtccgggcgatgagaattcacagtcccaaaatgtttgtacagatggtcataat
tgcccaggagatgaaaatcaacagcaatccaatgtttgtacagatggacacaattgtcca
ggagatgaaaatcagcagcaggcaggtgtttgtacggatggacacaattgcccaggagat
gataatcaacagcaatccaatgtttgtaccgatggacataattgcccaggagatgaaacc
ccccaacagtcaaataattcatgcacagatggtcataattgtcctggtgatgaaaaccca
gatcagactgctggccagcaggtgacctctgccctctcagacagtgctattgttgctcct
cccacggtcccactggacactcatgcagctgtgtccgtgtcagaacaggtgcctgcgatc
ctaatgcaggagcctgaatctaaacaagattcagaggcaatggagaccacgccagtggat
gctgcaccacaagaattaccacaaccacaggaagtggcacctcctcaagaagctgctgct
ctaaccaccacaatggtggcagcaccacaagcagagaatccgcccatcgttcctaaacag
gaggagccaatggacattggtccaccaactgtggccaccctccagggtggagttttgact
gtcggaccaccggtggtggctgcaccttcacaacccattgatacctcagcaacagacaca
gaccccttagcaactctggcttcagcagcaatatcatctggctcagcacagaccagtatc
aaacaggaacctggcattattgcagctaatggaatcaaacaggagattcaggagaagccc
gagactttcccaaagacgcccacgacaccggtgaagaaggagggcaaccagtggtacgat
gtagggatcataaagggcacctcctgtgtcgtgtcccacttctacctgtcaacggacgct
atgcaagctggtggaaatggaagtgacatcgatgtggtgaatgtgggtgacgtcaatgtt
ttaaagaaacaggaactcctaccgggaacagcctacaaattccgagtggccggaatcaat
gcctgcggccgggggtcattcagtgagatctcggccttcaagacctgcctccctggctat
ccaggcgctccatcagccatcaagatcagcaaggtaggaggcaagagtacagaaggagcc
cacctctcctgggaacccccacaaaacacggccggcaaaatcacggaatactctgtctat
ctggctgtacgcaatgcagctgcccacgtggatcagaagcccggtgctcccgctcagctg
gcatttgtgcgtgtatactgtggtcccgcccccacgtgcacggtgacggcagccagcttg
gcctcggcacacatagactatacaaccaagcccgccatcatcttccgtattgctgctcgt
aatgaaaaaggctatggtccagctacgcaagtcaggtggcttcaagatgcacagagtcct
gctgcccagaagattgcagtcaagagaacaatttcagctcaaggagagggaactcaagtg
ttgggtgctggtcaggtgaaaaggttaaagacggatgacgagaacgagaaagcaatgtaa
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integrated database retrieval system
