Ostrea edulis (European flat oyster): 125655071
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Entry
125655071 CDS
T09123
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03013
Nucleocytoplasmic transport
oed04141
Protein processing in endoplasmic reticulum
oed04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125655071
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125655071
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
125655071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125655071
04131 Membrane trafficking [BR:
oed04131
]
125655071
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125655071
Membrane trafficking [BR:
oed04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
125655071
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125655071
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
125655071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
125655071
NCBI-ProteinID:
XP_048741184
LinkDB
All DBs
Position
7:66027081..66045898
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AA seq
312 aa
AA seq
DB search
MVSVINSIDTSHEDMIHDAQLDYYGTKLATCSSDRSIKIFDVKGGQQTLITELRGHDGPV
WQLAWAHPMFGNLIASCSYDRKVIIWKETNGSWGKLYEYQNHDSSVNSVNFAPHEFGLLL
ACGSSDGSISIISSSGDGTWDAKKIPNAHSIGCNAVSWAPPINPGDLLDPSGRHQPIKQL
VSGGCDNLVKIWKEEDGQWKEDQKLEGHSDWVRDVAWAPSIGLPKSIIASCSQDLRVIIW
MNDGNGWTQKVLNKFNDVIWHLSWSITGNILATSGGDNKVSLWKETLNGDWVCISDVNKG
QGQISDGQRSLS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggtctccgtcatcaactcgatagacacctcacacgaggacatgattcatgatgctcag
ctggattactatggaacgaagctagccacttgttcatcggaccgatccatcaaaatattt
gatgtcaaaggcgggcagcagacgttaataacagaactcaggggtcacgacggacctgta
tggcagcttgcctgggctcaccctatgtttggaaatttgattgcttcatgcagttatgat
agaaaggttatcatctggaaagagacaaatggatcatggggaaagctctacgaatatcag
aaccacgactcctcagtgaactctgtgaactttgcccctcatgagtttggcctcctgttg
gcatgtgggagttctgatggttccatctccatcatatccagctcaggagatggaacatgg
gatgctaagaaaatacccaatgcccattctatcgggtgtaatgcagtaagctgggccccg
cccatcaacccaggagatttattggatccttcaggacgacatcagccaatcaaacagctt
gtctctgggggctgtgacaacctcgtcaaaatctggaaagaggaggatgggcagtggaaa
gaggaccagaaacttgaaggtcacagcgactgggtcagagacgttgcctgggcacccagt
ataggtctgcccaaaagcattatagcaagttgttcacaggatttgagggtcatcatctgg
atgaatgatggtaatgggtggacacagaaagtgttaaacaaatttaatgatgtaatctgg
catctcagctggtcaatcacgggcaatatactggctacatcaggaggagacaacaaggtc
agcctgtggaaggaaacattaaatggcgactgggtgtgtatcagtgatgtaaacaaaggt
caaggacaaatatcagatggccagaggtcgttgtcatag
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integrated database retrieval system