Entry |
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Name |
(RefSeq) DNA repair protein complementing XP-C cells homolog isoform X2
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KO |
K10838 | xeroderma pigmentosum group C-complementing protein |
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Organism |
oed Ostrea edulis (European flat oyster)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:oed00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
125655220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:oed03400]
125655220
DNA repair and recombination proteins [BR:oed03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
125655220
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
7:complement(38640870..38701891)
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AA seq |
1018 aa
MVARKRTQRTDKATESNRITGDKDRCKISSGGDDDDVSPPKAEKIAGIPGDKDADMIQTD
EKRTSDVKGKSRKRAVPLVDADNSSKNKRSRSSRSELQVIKEGTRVRKQKPGASKADRKQ
APDPNRKTNQKSKNAPGPDSKTDQKLKNAPGPDSKTDQKSKKAPGPNSKADQKSKNAPGP
DSKADQKSKNAPGPDSKADQKSKKRKGGKSEVDLSVLKRRSGRGNYVKTSSRPAVKETVE
SSVRDEEKTVLNTEMLELCDLKTDKVKETRSEDVGVQIDKDYADVGVMSSSESDEADDFE
PVIKKTKVQSKTGSGKVSATMDRKSKILSNSDTKKASEKTKKTCPGRKRATKVKEMKQSS
ENKSHHDNKGMSKRRGIPKSKESSDNSTGESRKSATTSQKNIDHLNVMSVLLHMEGGREV
PGSSGTVPGGQLSEGETDKDSEEESDWEEVKDFEGSPVKSQIPTDPVEVILEAPNILKKR
KKREFDWKAYVQRQINRFNKTLREDIHKVHVMCLLMRGRYLNQMCNDLLLRGVALSLLPQ
EFSSVPPRKYDVTTHTRLVNWYKGTIIIDPSIAVTDDHKSNLTPETIVRRVEDRKVNSRL
EFVLFYLVTLRCLGVHSRLVTSLQPLPLKNSKQGDLKDDCKKINIKGNPAAIKKAKKPNS
KVKPAGQAKVEKRSKDKTDKRDRDHTEKTSKSGAQGTSKTLKTKSKNLRKRGSKVRPESY
HDNSDLEDSGDDFEPEEDGCSGGRKRKTSDSSLKINESPDRSEEDFEEETQTFRSPLRKS
ISGKKKNQKILSSDSENDAQLLNQSCDEWVEVYIDQESSWICIDCLRGHINRPYRIESAA
TQPVHYVVAYSEGGKWKDVTARYASKWMTETRKLRVDPEWWEETLSVYRDKEDEVEDEEI
KASLMKRPLPTSVSDYKSHPLYALRRHLLKFEAIYPETAAPLGYIRGEPVYARECVHELH
SRENWLKEGRAVRIGEEAYKMVKSRAKWNKPKLDPDALDLELFGFWQTDVYIPPPAVD |
NT seq |
3057 nt +upstreamnt +downstreamnt
atggtagcacgcaaacgcacacaaagaactgacaaggcgacagaaagtaacagaatcaca
ggtgacaaagatcgatgtaaaatctcgtcaggtggtgatgacgatgacgtttctcctccg
aaggcggaaaagatcgcggggattcctggagacaaggatgcagacatgatacaaacagac
gagaagcggacgtctgatgttaaagggaaatctaggaagagggcagtccctttagtggat
gctgacaacagctcaaagaataaaagaagtcgttcatctcggtcagaattacaggtgata
aaggaaggtactcgggttaggaagcagaaaccaggcgctagtaaagcagaccgaaagcaa
gccccagaccctaacagaaaaacaaatcaaaagtcgaaaaatgccccgggtcctgacagt
aaaacagatcaaaagttgaaaaatgccccaggccctgacagtaaaacagatcaaaaatcg
aaaaaagccccaggcccaaacagtaaagcagatcaaaagtcaaaaaatgccccaggccct
gacagtaaagcggaccaaaagtcaaaaaatgccccaggccctgacagtaaagcagaccaa
aagtcaaaaaagcgaaaaggaggcaaaagtgaagttgacttgagtgtgctcaagagaaga
tcagggagaggtaattacgtaaaaacgtcgagcagacccgctgttaaagaaactgttgag
agcagtgtgagagatgaggagaagacagtattaaacactgagatgttagaactgtgtgat
ttgaagactgataaagttaaagaaacaagatcagaagatgtaggtgttcagattgataag
gattatgctgatgtaggggtgatgtcctctagtgaatcggacgaagcagatgattttgaa
cctgtgataaaaaagacgaaggtccagtcaaaaacaggtagtggaaaagtgagtgctact
atggatagaaaaagcaagatactttcaaattcagacacaaagaaggcaagtgaaaaaacc
aagaaaacatgtccaggaaggaaacgagcaacaaaggtcaaagaaatgaaacagagcagt
gaaaataaaagtcatcatgacaacaagggcatgtccaagaggagaggcatccccaaatca
aaggagtcatctgataattccacaggtgaatctcgcaaatctgccacaacaagccagaag
aacatcgaccatttaaatgtgatgtctgtgttactccacatggaaggagggagggaggtg
ccaggctcctcggggacagttcctggaggtcagctgagcgagggagagactgacaaagac
agtgaggaagaatcagactgggaggaggtcaaagattttgaagggagcccagtgaagtcc
cagatccccacagatcccgtggaagtcattctagaggcccctaacatcctcaagaaaagg
aaaaagagagaatttgattggaaagcatacgttcagagacaaatcaatagattcaacaaa
actctgagagaagacatccataaggtacatgtgatgtgtttactgatgagggggcggtac
cttaatcagatgtgtaatgatctgcttctaaggggtgtggctctatccctcctacctcag
gaattttcctcggtcccaccaagaaagtacgatgttacgacacacacacgcctcgtgaac
tggtacaaagggactattatcattgatccaagtatcgctgtaacagatgatcacaaatct
aatctgactcctgagactattgtaaggagagtggaagacagaaaagtgaacagtcgactg
gagtttgttttgttctacctcgtcacactgagatgtttaggagtccactctagactggtt
acatctctacagcctcttccgctcaaaaactccaagcagggagatcttaaagatgactgt
aaaaaaataaacataaagggaaacccggcagcaatcaagaaagccaagaaacccaactcc
aaggtcaaacccgcaggacaggcgaaagtggagaaaaggtccaaggacaagacagacaaa
cgggatagagatcacacagaaaaaacatccaagtcaggagcacaagggacctcaaaaact
ctcaaaaccaaaagcaagaatctcaggaagcgaggctccaaagtgaggccagagagttat
cacgacaacagcgaccttgaagactcaggagatgactttgagccagaggaggatggttgt
agtggaggaagaaagaggaagacttcagatagctcactcaagatcaatgaatctccagac
aggtcagaggaagactttgaggaagaaacccaaacatttaggagcccactcagaaagtca
atctcaggaaagaagaaaaaccaaaagattttatcttcagactctgagaatgatgcccag
ctgcttaatcaaagttgtgatgaatgggtggaggtgtatattgaccaggagagctcgtgg
atatgtattgactgtctgaggggacatataaatcgtccgtaccgtatagaaagtgctgcc
acccaacctgtgcattatgtagtggcatacagtgaaggggggaaatggaaagacgtaaca
gcgaggtatgcttctaagtggatgacggagaccagaaagctgagggtggatcctgagtgg
tgggaggagacacttagtgtgtatagggacaaggaggacgaagtggaagatgaggaaatt
aaagctagcctgatgaagcgcccattacctaccagtgtgtctgattataagagccacccc
ctgtatgcgcttaggagacatttactgaagtttgaggctatctatccagaaacagctgcc
ccgcttggctacataagaggagaaccagtttatgctagagaatgtgtgcatgagttacac
tcacgggagaattggctaaaggagggaagagcagttcggattggagaagaggcttacaag
atggtgaagtccagagccaagtggaataagcccaagcttgatccggatgccctggatttg
gagttgttcggattctggcagacagatgtgtacattcctcctccggctgtagattaa |