Ostrea edulis (European flat oyster): 125655338
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Entry
125655338 CDS
T09123
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125655338
Enzymes [BR:
oed01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125655338
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
125655338
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Sina_ZnF
zf-C3HC4
zf-C3HC4_2
zf-TRAF
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
125655338
NCBI-ProteinID:
XP_048741554
LinkDB
All DBs
Position
7:complement(87269146..87368038)
Genome browser
AA seq
1089 aa
AA seq
DB search
MGFDVNNFVTTVREEMICELCCGVLDNPLRTTCRHIFCSGCILPWVVRTGKCPKGCQRLT
PDDLTNELELRDCILNLSVHCEFRSRGCKRLVRLRDIGVHKTDCEHRPVPCPNEDCKVIM
NIRDLEKHVTGNCPYKEVGVCQKGCSLVLLQKTADSHECVSALRSYIAGQENEINTMETK
LQLVSLNAAKREHELLSQIAFLHNENQLQVLEFNRKLNDISTKPRKRDKSVNAATNTDDA
VWLVVTVSLHRVNGSLGFNIMGGYTPEPNNNEAEKQEELSGGVMVSKVTESSPAEKNGLK
IHDVITQVNGQDLSQASHEEAVEAFRAASEPITVEVLRRVSKNKMKNTPPTMVSTSTQTE
EELYGRPPTPPFFTYSPGLYQAGTRRPLAFSPSTDMGLTDIEMAHNLDYDDPYFDDRVGY
EMEYEEVILHRSVENQKLGLTLCYGSLEDETTDIFISEVEAHSVAAQDGHIKEGDQVLQV
NGVDVRSRDQAIQLFSERGSDIRLLLARPQLQLDDGFMEDQNVTLDDLHMDILEKHHRDN
MQIMASMLARGHMEEEGGTTDTATTENSLHKHEKDSGVGRTDESTRNDESSEQDPFDTEC
TNSPAATSRFRRKDLNYSDDSVLSNEVTDHDTNVTDYGNECDSFRAHLESRCVNNNMESS
PQKNSGRKDSVSSIERELALLNKEMETIHMECQEMCDKHTKDITTKQQHQREAVQIKSPR
IVPRMGTRLEYLKYVQLYDNPNSWDRRDTLPKPTTQQPKSQCEKDASTTTSAYNTGESCR
STPLTLELNQGSDEGDFKNSMLCLAPSNTNVSALSDTEKQTQTPCGPNDGSSDDYQSIAA
DFKESSTLQKQNCMGESLQDLYMQYADVMYTNQANLQHTIAIQQKLFQQQIEQNPMRSRR
NNGCSPQPPTSAASSVSGQGESKSRDSLNVSRDSPKATPPDSSGEMEWVVKRRPDGTRYI
TRRPMKSKLLKERAKKISEERCGMTTDDDAMSELKFGRYWSKEERKKHLEKARDHKRKRE
CLMKAKMETLKEAEEKKEVNIVELSHRKMMKHKNKKVLDNFVTVQEMLAHGSRVSDGKTY
NPLLSVTTV
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgatgtgaacaatttcgtgaccacagttcgcgaggagatgatatgtgagttg
tgttgcggggtactggacaatcctttacgaaccacgtgccggcacatattctgctcaggg
tgtatcctcccgtgggtggttcgaaccggaaagtgtcccaaggggtgccagcgccttacc
ccagacgaccttacaaatgagttagagttgagggactgcatactgaatttgagtgttcac
tgtgaatttcgtagtagaggatgcaaaagactggttcgtctgcgagatattggggttcac
aaaacagactgtgagcatcggcccgtcccctgtccaaacgaagactgtaaagtgattatg
aacatcagggacctcgagaaacacgtcacaggcaattgtccatataaggaagtaggggtc
tgccagaaaggatgtagtcttgttttgctgcaaaaaacggcagactcacatgaatgtgtt
tccgctttacgatcatacatcgctggtcaggaaaacgaaataaataccatggaaacaaaa
ctgcagttggtcagtctaaatgccgctaaaagggaacacgaacttctgagtcaaattgct
tttctccataacgaaaatcagctccaagttctggagtttaacaggaagctgaacgatatt
tcgacgaagcctagaaaacgcgacaagagcgttaacgctgccacgaacaccgatgatgct
gtgtggctggttgtgacggtctccctgcacagagtgaacggttcactaggcttcaacatc
atgggaggatacacgcctgaacctaataacaacgaggctgagaaacaagaggaattatct
ggaggggtgatggtttccaaggtaacggagagcagccctgcagaaaagaatggactgaag
attcatgatgtcattactcaggtaaatggtcaggatttgtcacaagcaagtcacgaggaa
gcagtggaagcgttccgtgcggcgtccgagccaatcaccgtcgaggttcttagacgtgtc
agcaaaaataaaatgaaaaacaccccaccgaccatggtgtccacatctacccagactgaa
gaggagctctatgggagaccccccaccccaccgttcttcacctattccccaggtctatac
caggccggcactagaagacccctagccttttcccccagtacggacatgggactaacagat
atagaaatggcacacaacctggattatgatgatccatacttcgatgacagagtgggatat
gaaatggagtacgaggaggtgattttacacagatcggtagaaaaccagaagctgggcctc
actctgtgttacggatccctggaagatgaaaccacagacatctttatcagtgaggttgag
gctcatagtgtagctgctcaggacgggcacatcaaagaaggggaccaagttctccaggtg
aatggggtagacgtgcgaagtcgggaccaagcaatacagctattctcagaaagaggctcg
gatataaggcttcttctggcaagaccccagttgcagctggatgatgggttcatggaggat
cagaatgtgaccctggatgatttacatatggatattcttgaaaaacatcaccgtgacaac
atgcaaatcatggcctccatgctggcacggggtcacatggaggaagaagggggcacaact
gacaccgccacaacagaaaattcactccacaagcatgaaaaggacagtggtgttggccgt
acggatgaaagcactaggaacgacgaaagctctgaacaggatcctttcgatacagagtgt
accaattctccggcagcaacctccaggttccgaagaaaggatctgaattacagtgacgac
agtgtgttgtccaatgaagtgactgatcacgacactaatgtgacagactatggaaatgaa
tgtgacagttttcgtgctcatctagagagcaggtgtgtaaataacaacatggagagctct
cctcagaagaactccgggagaaaagactcggtgagcagcattgagcgcgagcttgctctt
ttaaataaagaaatggaaactatacacatggagtgtcaagaaatgtgtgacaaacacaca
aaagacattactactaaacagcagcatcaacgagaagctgtgcaaattaaaagtccaaga
attgtgcctagaatggggacaaggctcgaatatctaaaatatgtgcaattatatgacaac
ccaaattcctgggatcgccgcgacaccttacccaagcctactactcaacagccaaaaagt
caatgtgaaaaggacgcgtccacaaccacaagtgcttacaataccggcgagagctgtcga
agcacaccactcacactagaacttaaccaaggctcagatgaaggagatttcaaaaactct
atgttgtgcttggcaccatccaacaccaatgtttcagcattaagtgacactgagaaacag
acccagaccccgtgtggtccgaacgatggttctagtgatgactaccaatccatcgctgcg
gacttcaaggagtcgtccacactgcagaaacagaactgcatgggcgaatcgctccaggat
ctgtacatgcagtatgctgacgtgatgtacacaaaccaagcaaatctgcagcacacaata
gccattcaacaaaaactttttcaacaacaaattgaacaaaatccaatgaggagcaggaga
aataatgggtgttctcctcaacctcctacgtcagctgctagctcggtaagtggacaaggt
gagagtaaatctagagacagtctgaatgtctcaagagatagtccaaaagccacaccccct
gacagtagtggagaaatggagtgggtggtaaaacgacggccagacggaactcgatacatc
acgcggcgtccaatgaaaagcaagctcctgaaagaaagggccaagaaaatttcagaggaa
agatgtggaatgacaacagatgatgatgcaatgagtgaattaaaatttggacgttattgg
tcaaaggaagagcgcaagaagcacttggaaaaggcacgcgaccacaaacgaaaacgagaa
tgcttgatgaaagcgaaaatggagaccttgaaagaagctgaggaaaagaaagaagtaaac
atagtcgaactgagtcatcggaaaatgatgaagcataaaaataagaaagtgttggacaat
tttgtgactgtgcaggaaatgctggctcatgggagtcgtgtgtctgatgggaaaacatac
aacccgttactatctgtgactaccgtttga
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