Ostrea edulis (European flat oyster): 125655638
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Entry
125655638 CDS
T09123
Name
(RefSeq) nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125655638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125655638
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125655638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
HCR
Vps39_1
Motif
Other DBs
NCBI-GeneID:
125655638
NCBI-ProteinID:
XP_056005442
LinkDB
All DBs
Position
1:42414667..42443061
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AA seq
823 aa
AA seq
DB search
METDIADFSELRQQAEQLTADFDSASDLPRVNRNIAQILEAGSRLLSKVAPISQDSSDVR
ASILLGTKGYDVPKISQKLEGLSASKTFEPLEPVKDTDIQSFLKNERENALLAVIEQTRK
HTFEESERRHWECMENEWEREKQKILNTLRGLNQDTTDFQPEAESFAVDPVSMHGRSNLN
NIEMAYSRQVYMYNEQVLQGSIRPNLVDAFSDIAVSLDDKPMIDLWEQVRYMVEVPLISS
NSIKETRTDYRTQAAFVQKGREYLEQMYCKHIQSMIYSNLQQAQLGGIPSTYNMVKSYLN
VRPPHIKGLEDGLVDGHPVWAMIYLCLRCGDLQAALQVTDKASHSLGDFPTYLREYVTDD
DHRLSAANETKINLHYRRIIKNGNDPYKRAVFCVIGRCDSSEDHSEIADKIDDYLWIKLS
QIQVDSDPSRQHGFTLQRLQSLLYEDFGESHFSGYQNPFLYFQVLILTAQFEAAIEFMSR
IDRLLCHAVHVALVLYELKMLLLPQSTQAQLLTKDSSDEGPLRRLNFFRLITTYTRKFEA
TDPREALQYFYFLNDLRTSQGENLFMSCVSELVLETKEFEMLLGKVEPDGTRRLGAIDKF
QHDTQRIIELVARDTENKGMFEEAVMLYDLGSKHDKVLELLNRLISQVVSHPNTPQSARD
RLRAMAISIAKRYRERNNEGSRSNTSTFYLLLDLLTFFDCYHVGNVDEAFEVMKQLKLLP
LTADAVENKVNAFRHYTDEVRRCLPDILIATMNILHNQYKNAKNSAPRGGYSGQGKTEDG
GKETFLNYLRSQARALIMFAGMLPYRLPGDTNARLVQIEVLMN
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggagacagacattgctgatttttctgagcttcggcagcaagcagaacagctgacagct
gattttgacagtgcgtcagacttgccacgagtaaacagaaatatcgcccagatcttggag
gcagggtctcgacttctgtcgaaagttgctcccattagccaggattcatctgatgttaga
gcgtctatattactaggcactaagggatatgatgtgcctaaaatctcacagaaactagag
ggactaagtgcctccaagacatttgagccactggaaccagtgaaagacacagacattcaa
agtttcctcaagaatgaaagggagaatgctttactggcagttatagagcaaacaagaaaa
catacatttgaggagtccgagaggaggcactgggagtgcatggaaaatgagtgggagaga
gagaaacagaaaatcctcaatacactgcgaggtctgaatcaggacacaactgacttccaa
ccagaggcagagagttttgcggtggatcctgtcagcatgcatggtagaagcaacctcaac
aacatagagatggcatactccagacaggtgtacatgtataatgagcaggtcctacagggc
agtattcggccaaacttggtggatgcattctcggacattgcagtcagtcttgatgataag
ccgatgattgacctgtgggaacaggtgagatacatggtagaagtcccactgatctcctcc
aacagtatcaaggagacgcggactgactaccgcacacaggcagcattcgtacagaaaggg
agggagtacctagaacagatgtactgcaaacacattcagagtatgatctacagtaaccta
cagcaggcccagctggggggaatcccgtccacttacaacatggtcaaaagttacctcaat
gtccgacctcctcacatcaaggggctggaggatggcctggtagatggacatcctgtgtgg
gccatgatctatctgtgtctgaggtgtggggacctacaggcagcccttcaagtcacagac
aaagcatctcacagtcttggagattttcccacatatctcagagaatatgtcacagatgat
gatcacaggttgtctgcagctaatgaaaccaaaattaatcttcactatcgcagaataatc
aagaatggcaatgatccatacaaaagagctgtgttctgtgtgatcggtagatgtgactct
tcagaggaccattcagagattgcagataaaattgatgactacttgtggattaagttatct
cagattcaggtcgattcagacccttccagacagcatggatttaccttacagaggctgcag
agcctactctatgaagattttggggaaagccacttcagtggctatcagaatcccttcctg
tacttccaagttctcattctcacagctcagtttgaggcagccattgagttcatgtccaga
attgacagacttttgtgtcacgctgttcatgtggctctggtgttatatgaacttaagatg
ttgcttcttcctcaatctacacaagctcagcttttaacgaaagactcgtctgacgagggg
ccattgaggagattaaactttttccgcctgatcaccacatatactcgtaaatttgaagca
acagacccccgggaagccctgcaatatttttatttccttaatgatctaagaacatcacag
ggagagaatcttttcatgtcttgtgtcagtgagttggtgctagagactaaagagtttgag
atgctattgggtaaagtggagcctgatggaacaaggaggttgggtgcaattgacaagttt
cagcatgacacccagagaatcatagaactggttgctagggatacagagaacaagggcatg
tttgaggaagcagtcatgttgtatgaccttggcagcaaacacgacaaagtgttagaatta
ctgaacagactgatcagtcaggtggtatctcacccgaacactccccagtctgcgagggac
agactacgggccatggctatcagtatagccaaacggtacagagagagaaataatgaaggg
tcaaggtcaaacaccagcacattttaccttttgcttgaccttttaaccttttttgattgt
tatcatgttgggaatgttgatgaggcctttgaggttatgaaacagctgaagttacttccc
ttgacagccgatgctgtggaaaataaagttaatgctttcaggcattacacagatgaggtc
agacgatgtttacctgatattttgattgccactatgaacatattacataatcagtacaaa
aatgcaaaaaactctgccccaagaggaggttactcagggcaagggaagactgaagatggg
ggaaaagaaacgttcctgaattatctgcggagtcaagcgagggccttaattatgtttgcg
ggtatgctgccctacagattgccaggcgatactaatgctcgtctggttcagatcgaagtg
ttgatgaattaa
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