Ostrea edulis (European flat oyster): 125656334
Help
Entry
125656334 CDS
T09123
Name
(RefSeq) neural-cadherin-like isoform X1
KO
K27892
neural-cadherin
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oed04515
]
125656334
Cell adhesion molecules [BR:
oed04515
]
Cadherins
Cadherin related
125656334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Ig_Shg
Laminin_G_1
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_pro
Cadherin_2
EGF
EGF_Teneurin
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
125656334
NCBI-ProteinID:
XP_048742904
LinkDB
All DBs
Position
1:complement(40237322..40277089)
Genome browser
AA seq
2934 aa
AA seq
DB search
MADSVQFTNTTCMCSILIVTIVFTLLRSVTSDSVTPVIVPSTAEVGYKVLKLGCSKSDLQ
LRTKDPFGDFYDNFALTDTGELVLRRTVPHLGRQGYKLTVITHSGCYDNVPTKRTFTLDI
SPRETDVFPDRVYTGYILTTEKSDSMVTNLSRIHVHKVPQQEFVLQGFYSDYFKILSSDV
TNEIRVVLQKEFPSAISKRAWYFSLLSKVGSEITGHANVEILLVDNPYPKHVQLQSMSEN
NLRSLHLTAKFNQDPPNIVRSRVLRRRRQTSGTKKQTVQLQENATGVIFTVDSGQPQGTN
IQFEIRASTPEDIFLIDRSTGEVTLKSNAKLDFDYNGVRKYVINIDVKRQEDSTAGPVWR
VLQQVEVTVDVLNVNDEPPRFITKPTPYLAVVATDAQAGVSVFRIEAEDVDGGTDAVKYF
KESVGSSPYFEVGQDTGIIRTTEAITSGLDYVIKVYAIDSKAEIQQKTGPVNINIRRGQR
APQFYSSSYEASVEESNQADQTATENRFQAIDADGNNASITAKNFQVGGTTKYSVYESPT
AISTRFAIEDGMVKTLRTLDYESDQHKFVLTVRAEDTISGLSSDVKLTVNLLDRNEFTPL
FSKSTFTTTVKEDIPRGTSVIEVSASDKDGSTILSYTVTDPIFSITTTGNGQVGVIHTNG
TLDYDRKFPHYYEFKVIASDNGVEPRTAEARVIVTTNNTNDQAPEFDDNKVATLMGNAQP
GSTVIIVRAVDEDGDKVTYSFDGGRTVSDVFEIDPASGRISLRAGQSPPSDRDQIFLNVT
AKDDGSCCDGPGKILSSTATITINIEDEENVKPRFVNCAYTPTVTEEQDPGVLVQKVSAT
DPNRGQNGKLEYSITSIKELDDSQEKNYFSINSSTGEIYTREKLDRETQSSKNLFITVKV
QDKGSNPLDDYCTFAVTIQDINDNDPEFGTSRYEGRVLKSAAVGQKFLTIKATDKDLGDN
ANIKYSLKTNPNGLFQVNVDTGDIEVAKSLQSAGSQITLVATATDQGTTPRSTDVNIDIS
VTTDSDVLPPLWTPLNPTYTVKESEGVNFVIATLTAQNRITNIPDSSLIFNMVINNNGQT
ELSDRTEKFIILSGADRVNLTILEILDYETQKEYTLNLRASNIFNTPINSDNYPKIVVQD
ANDEIPKFLNIDPQNGNIGLSVLENEAAGTPVQSVSAIDADETEAFKKVTYALHPDGSTT
TDQFAINPTTGMITTRVQFDRESTDFYIMKVFAIDGAPSSRDSSGAHNTGSAVVRVSIKD
VNDNNPYFEESLYFASVREDSFTGQSITTIAAKDPDEATFTYSLSGSSLFAVKSGTGEIY
VAGNLDYETEPNVYNVTLVVNDGKFSNQTTVQITIIDTNDNSPKFEQNTYAIRTLEEGKV
YNQVLITVRATDPDIHRNPRNEIEYSLSQDDAVINSLFTINKNTGAISINGELDRDKPNG
REVYQFTVLAIDEPTADSHLTGYATVQVFPLDINDNSPQFDPNSLIGVVNEMSAPDVLVM
TISATDNDDGDNAKVSYAITAGTQLPREAFRINENTGEVYTTVSDLDREKHPVYTFTVVA
KDAGAPTSLSTTATATVNIKDINDNEPVFEENIYRITIPETQEGLIITIRANDLDIDDTL
TYSLIGPNDRTHFQITVDGRDGRLEVYTRPDYETPAQRFFNLTVQVSDGKFTDITYIEIT
VEDVNDEIPIITPQNVEINRMENVAIGDILANFVASDRDEGINGLFDFYVSRKPISEKPD
YYFRIMQTNENGTVILKNSLDHETITRHIVRILVIDRGIPPNTGTATLTINVGDINDEDP
TFMARPEPKVMEGSPPKQVTVLYGVDPDGSPYGGPFTFNLDCANSICNKFSLQENPSGDN
GNGIATIRSLVKFDREEQKFYYLPIVMTDMRGHPDQPTLGRTATSTLTIEIGDENDNPHS
PAHQNIHVYNYKGLFGNIDIGQVSDTDLDDDDLDDKTFTLLGPVQGLMYFTVNKDSGMIR
MLEHVPPTRTGYPLQVKIFDRVFSNLNVVSTVTVYITELPEEAPYMSGSVRLTGTTPEEF
IKKPSNGESPYTKFRLRMKDKLGVPSIDNVQIISVLKSTVDDVDYTDARFAAYGSPYFQG
SQLDGIVNQYRNEFQQDTGATIAMVGIDMCYREICEGGGCNNKLIVYDEPNMVTTNGQSV
VGVKTSVVAECACTVSTNVKSCTPNYCLNGGTCKMNAWDVISCECLAGFDGPRCQVTKQG
FDGTGYAIYEPLQQCENSLTSIEIITTKADGLILYSGPVTTLDPNAPQDFMYLQLAGGYP
ELVMDHGSGSVTLTLNGRDSKGVLKMSSLNDGKWHKIDIRRQGKFVTLTVDHCLSADSQD
GENQDRTACENSGSTRGEHIFLNVNAPLQMGGRYISPAYPAGVSNQKFKGCVRNMRHNGE
LYNLYTKNFYPGSRDGCPEEDNACESPANQPKKCGEEGKCELVALPQSIRCICNPGYRGT
TCELKTTEKFFQTQSYMDWMLQKQFIDSLVSRTMDIQLMYRTRDKSGMIFHVTGEGIGEF
IKLEIVENVIQVLYNLGDGNKVLQMVNVTAADGYWHTLYFRRQGRSIILSQDGGEGPLYV
ETTADSKYQSLVVKNTQVYAGAEVSYEHSKTIDQTNPKDLENSCLTDIRMDMKWFPVTSA
ENNQNSNVKMVTETRTTNDCSRDDCNGNTCATYGKICFPLWGLHKCVCPEHHQEIGATCV
FIDYCQNSPCHHQATCVSDKSNAEHGYYCRCSPNMEGRLCNVYKEPVVSDAGNSDWVIGL
VIGLIILAIIVVVIVAFLLVKKQRRAADQKNIMNYEKEDYDIRENIVDYDEDGAGEDDHE
GYDINRLRKPADMTRMDKPIMASHSRPLKSGQPAGTIGNFITDRLDDANDDPDAPPHDTL
RDFQYEGEGSDAGSLSSLNTTSSGGDQDYDFLNEWGPKFSKLADMYNNYDDDSD
NT seq
8805 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcggtacagtttacaaacactacctgtatgtgtagcattttaatagtgacc
atcgtgtttactttgttacgtagtgtgacatcagactctgtgacaccggttatagtgcca
tctacagcagaggttggatataaagtcttaaaacttggttgttctaaatcagacttacaa
ctcagaaccaaagatccttttggggacttttatgacaattttgccctgactgacaccggt
gaattggtcctcagaaggacggtccctcacctgggaagacaggggtacaaactgactgtc
ataacccacagtggctgttacgataacgtccccacgaaaaggacgtttacgttagatatc
tctccccgtgagacggatgttttccctgatagagtgtacacaggttacatactgaccacc
gagaaatcggactcaatggtcaccaacctgtcccgcatccatgtgcataaagtcccacaa
caagagtttgttttacagggattttattccgattattttaaaattctgtccagtgatgta
actaatgaaatccgagttgttctgcaaaaggaatttccttcagcgatttccaaacgcgcg
tggtatttcagccttttatccaaagtcggtagtgaaataactggacacgcaaatgtcgag
attctgcttgttgacaacccttacccaaaacacgtccagttacaatcaatgtcagagaat
aacctgaggtcacttcaccttactgccaagtttaatcaagatccgccaaacattgtccgt
tctcgtgttcttcgacggagacggcagacaagcggcaccaagaagcaaactgtgcagctg
caagaaaatgcgacgggggtaattttcaccgtggattctggacaaccccaaggaacaaac
attcagtttgagatccgcgcctcgacaccagaagacatttttctcattgaccggagtact
ggagaagtaaccttaaagtccaatgctaaacttgactttgattacaacggagttagaaaa
tacgtcataaacattgacgttaaacggcaggaagacagcacagctggacctgtgtggaga
gttctacagcaggtagaagtaacagtcgatgtgctcaatgtaaatgatgagccaccaaga
ttcatcaccaaacccaccccatatctggcagtggtggctactgatgcccaggctggtgtg
tctgttttccggattgaggctgaagatgtagatggaggaactgatgctgtcaagtacttc
aaggagagtgtgggaagcagtccatattttgaagtaggccaggatacaggcatcatcaga
acaacagaggccatcaccagcggcttggactatgttatcaaagtgtatgccatcgactct
aaggcagaaattcagcaaaagacaggccccgtcaacatcaacatacgtcgaggacagagg
gcgccccagttctactcctcgtcgtatgaagcatctgtagaagaatctaaccaggcggat
cagactgccactgaaaacaggtttcaggctattgatgcagatggaaacaatgcgtcaatc
acagccaagaatttccaggtgggcgggaccaccaaatactcagtgtacgagtcccccact
gctatatctactaggtttgcaattgaggatgggatggtcaagacacttaggacattggac
tatgagagtgaccaacataagtttgtcctgacagtcagagcagaagacacaatttctgga
cttagcagtgatgtaaagctgacagtaaatctgctggacagaaatgagttcacgcctctc
ttcagtaaatccacttttacaaccacggtaaaggaagacattccaagaggaacctctgtc
attgaagtgtctgcatctgacaaagatggcagtacaattctgtcgtacacggtgactgac
ccaattttctcaatcaccaccacagggaatggacaagtcggggtcattcataccaatggg
acccttgattatgacagaaaatttcctcattattatgaatttaaagtgattgcctcagac
aatggtgtagagcctcgaacggcagaggcccgggttatcgttacaaccaacaacacaaac
gatcaggccccagagtttgatgacaataaggtagctactctgatgggcaatgcccagccg
ggctcaacggtcatcattgttcgagcagtggacgaggacggggacaaggtcacttatagt
tttgatggtggacggacagttagtgacgtgtttgaaattgaccccgcttctgggcgtata
agcctaagggctggacagtcgcctccatcagatagggaccagattttcctgaatgtcacg
gctaaggatgatggttcctgctgcgatggtccagggaaaatcctgagcagtacggcaacg
attacaataaatatcgaagatgaggagaacgtcaaacctcgatttgtgaattgtgcatac
acgccaactgttaccgaggaacaggatcctggtgtattggttcagaaggtgagtgcaacg
gacccaaaccgaggacagaatggcaagctggagtattccatcaccagcatcaaggaactg
gacgactctcaagaaaagaactatttcagtatcaactcctccacaggggaaatctacaca
cgagagaaactggacagagagacgcagtcatccaagaatctgttcatcaccgtcaaagtt
caggacaagggaagtaaccctttggatgattattgcacatttgccgtcacaatccaggat
atcaatgacaatgatccagaatttggcacgtcgcggtatgagggtcgggttctgaaatcg
gctgctgtaggacaaaaatttctgacgatcaaagcaacagacaaagacctgggagataac
gccaacataaaatactcacttaaaaccaaccccaacggcctgttccaagtaaacgtagac
accggagacatcgaagtagccaagtccctccagtcagcgggatcccaaatcactttggtt
gccacagcaacagaccagggtactacaccacgatctactgatgtgaacatcgatatttcg
gtgaccacagactctgatgtcctgcccccattgtggaccccattaaacccaacctacaca
gtgaaggagtcagagggggtgaactttgtgattgctaccttaacagcccagaaccgcatc
accaacatcccagattcttcattgattttcaacatggtgatcaacaacaatgggcagacc
gagctttcagacagaacagagaaattcatcatcctgagcggtgcagacagagttaacctc
acgatactggaaatcctggactacgaaactcagaaagagtacacactcaatctccgtgct
tcaaacatcttcaacacacccatcaacagcgacaattaccccaaaatagttgtacaagat
gccaatgatgagattccgaaatttctcaacattgatccccagaatggaaacataggcctg
agtgtactggagaatgaggcagcgggaacacccgtgcagagcgtcagcgctattgatgct
gatgaaacagaggcctttaaaaaggtgacgtatgccctccaccctgatggtagtaccacc
acagatcagtttgcaatcaacccgaccacaggtatgatcacgactcgcgtccagtttgat
cgggaatccacggatttctacatcatgaaggtctttgctatagatggtgctccgtcttcc
agagactcgtctggggctcacaacacagggtcggctgtggtgagggtatccattaaagat
gtaaatgacaacaatccatactttgaggagagtctttactttgcctcggtccgagaggac
tcttttactggtcagtccatcacaactattgcagccaaagacccagacgaggccacattc
acatattccctatccggctcgagtctctttgctgtcaaatctggaacgggagaaatttat
gtagcaggaaatctggactatgagactgaacctaatgtgtacaacgtcactcttgtggtg
aatgatgggaaattcagcaatcagacaacggtacaaatcactattattgacacaaatgac
aactctcccaagtttgagcagaacacctatgcaatccgaaccctggaggaaggaaaagtg
tataaccaagttctcattactgttcgtgctacagaccctgacatacacagaaatcctagg
aatgaaatcgagtactccttgtctcaggatgatgcggtcattaacagtctcttcaccatc
aacaaaaatacaggtgcaatatccattaatggggagctggatcgcgacaaaccaaatggt
cgagaggtataccaatttactgttctagcgattgacgagcctacagcggattcgcacttg
actggttatgcaacggtccaggtatttccactggacatcaatgacaacagtccccagttt
gatcctaactctctgattggcgttgtcaatgaaatgtcggcaccagatgttttggtgatg
acgattagcgccactgataatgatgacggggacaatgccaaagtcagctacgccatcacc
gcgggaacacagctgccacgcgaggcgttccgaatcaacgagaacacaggggaggtgtat
accacagtttccgatttggaccgtgagaaacacccagtgtacacgttcacagttgttgct
aaggatgctggagctcctacatcgctgtcaaccactgccacggcaacagtaaacatcaag
gacattaacgacaatgaaccggtgtttgaggagaatatctaccgcataacgattccagag
acccaggaggggcttatcatcactataagggcaaatgaccttgacatagatgacaccctg
acctatagcctgattggtcccaatgacagaacacatttccagatcacagttgatggacgc
gatgggcgcctggaagtgtatactagacctgactatgagactccggcccagaggttcttt
aatctgacagttcaagtcagcgatggtaaatttaccgacatcacatacatcgagatcacg
gtagaagatgtgaacgatgaaatcccgattatcacgccacaaaatgtagaaattaaccga
atggagaatgtcgctatcggagatatcctggctaattttgtggcttctgatcgggacgaa
ggcatcaacgggttgtttgacttctatgtttctcgaaaaccaataagtgaaaaaccagac
tactacttcaggattatgcagactaatgaaaatggcacggttatcctgaaaaattccctg
gaccatgagacaataaccagacacattgttagaattctggtcattgatagaggaatccca
ccaaatactggtaccgccactctgacgataaacgtaggggatattaatgatgaggacccg
accttcatggctcgccctgagcccaaggtcatggagggcagtcctcccaagcaggtgaca
gtgctttatggagtcgatccggatggtagtccatatgggggccctttcacctttaatttg
gactgtgcaaactccatttgcaacaagttctcattgcaggaaaatccttctggagataat
ggcaatggtattgccacaatcagatcactagtgaaatttgaccgagaggaacagaagttt
tactacctcccgatcgtgatgacggacatgagaggtcatccagatcaaccaacgctcggt
cgaaccgcaaccagtacactgacaattgagatcggggatgagaatgacaacccacactcg
ccagctcatcagaatatccatgtgtataattataaagggttatttggtaacattgacatc
ggccaagtgtccgatacagacttggatgatgatgatttagatgataaaacattcactctt
ctgggtccagtgcaaggcttgatgtattttactgttaacaaggattcgggaatgatccga
atgctggagcatgttccccccactagaacgggctacccactgcaggtcaaaatctttgac
agggtgttcagcaatcttaacgttgtctccacggtaacagtctacatcactgagttacca
gaggaggcgccatatatgtcgggatcagtcagacttacaggtaccacaccggaggaattc
attaaaaaaccttccaatggagagagtccgtacacaaagttccgactgcggatgaaggac
aagctgggggttccatcaattgacaacgtccagataatctctgttttaaagtccactgtc
gatgacgtggattacacagatgcaagatttgctgcttacggatctccatatttccaggga
agtcagttagacggaatcgtgaaccagtacagaaatgagtttcaacaagacaccggtgcc
accattgctatggttggaattgatatgtgttaccgcgaaatctgtgaaggaggaggatgt
aacaataaactgattgtatacgacgagccaaacatggtgacaactaatggacagtctgtg
gtgggcgtcaaaaccagtgttgttgctgaatgtgcctgtacggtgtcaaccaatgtcaaa
tcctgtaccccaaactactgtttgaacggagggacttgtaaaatgaatgcctgggatgtg
atcagctgtgagtgcttggcaggatttgatggacctcgctgtcaggtgaccaagcagggc
tttgatggtacagggtatgccatttacgaacctctacaacagtgtgaaaattccctcacc
agcatcgaaatcatcaccacaaaggcagacggtctgatcctgtacagcggacctgtaacg
actctggatcctaatgctcctcaagatttcatgtaccttcagttagccggaggttatcca
gaactggtaatggaccatggatcaggaagcgtgaccttgaccctgaatggtagggactcc
aagggtgttctaaaaatgagttcactcaatgatggaaaatggcacaagattgatatcaga
aggcagggcaagtttgtgacactgactgtggatcattgtctgtcagctgacagtcaggat
ggtgagaaccaggacagaactgcctgtgagaatagtggatccactcgtggagagcacatc
ttcctgaacgtgaatgccccattacagatgggtgggcggtacatcagtcccgcctatcct
gctggtgtcagtaaccagaaattcaagggctgcgtacgaaacatgagacacaacggggag
ttgtataacctctacaccaagaacttttatcccggaagtcgtgacggctgcccggaggag
gacaatgcctgtgaaagcccagccaatcaaccaaagaaatgtggagaagaaggaaagtgt
gaactggtggccctcccacaatccatccgctgtatctgtaacccaggttaccgcggaacc
acctgtgaactgaagaccactgagaagtttttccagactcagagttacatggactggatg
ttacaaaagcagttcattgacagcctcgtcagtaggacaatggacatccagctgatgtac
aggacacgtgacaaaagtggcatgatcttccacgtcactggcgagggcattggagagttc
attaaactagagattgtagagaatgtaatacaagtcctatataaccttggagatgggaac
aaagtccttcagatggtcaatgtgactgcagcagatggatattggcacaccctgtacttc
cgtcgtcagggacgaagcattatcctatcacaagatggaggtgaaggcccattgtatgta
gagacaactgctgactctaaatatcagagtctcgtcgtcaaaaacacccaggtatatgcg
ggagcagaggtcagctatgaacactcaaagactattgatcagactaatcccaaggacctg
gaaaactcctgtttaactgacatccgtatggatatgaaatggttcccggtgacttcagca
gaaaacaaccagaattctaacgtaaagatggtgacggagacaaggacaacgaatgattgt
agtcgtgatgactgcaatggaaatacgtgtgcaacatatgggaagatttgtttccccttg
tggggtcttcataagtgtgtgtgcccagaacaccaccaagaaattggagctacctgtgtg
ttcattgactactgccagaactcaccctgtcaccaccaggcaacctgtgtctctgacaaa
tctaacgctgagcacggctattactgtcgatgttcccccaacatggaggggcgattgtgt
aacgtttacaaagaacccgttgtgtctgatgctgggaactcggactgggtcattggactg
gtcatcggtctgataatcctagccatcattgtggtggtaattgtggctttcctccttgtg
aaaaaacaaagaagggcagctgatcagaaaaatataatgaattatgagaaagaagactat
gacattcgtgaaaatattgttgattatgacgaggatggcgcaggtgaggatgatcacgaa
ggttatgacataaatcgcttgagaaagccggcagacatgacacggatggataaaccaatc
atggcctctcacagtcgtcctctgaaatctggccaaccggcaggcactattggcaacttt
atcacagatcgtcttgacgatgcaaatgatgaccctgatgccccgccccatgacacgctg
cgtgatttccagtatgagggggagggaagtgatgcaggctccctgagttcgctaaatacg
acgtcttccggaggagatcaagactacgatttcctgaacgaatggggaccaaaattctca
aaattggcagacatgtacaataattacgatgatgattctgactga
DBGET
integrated database retrieval system