Ostrea edulis (European flat oyster): 125657346
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Entry
125657346 CDS
T09123
Name
(RefSeq) autophagy-related protein 16-1-like
KO
K17890
autophagy-related protein 16-1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04136
Autophagy - other
oed04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125657346
04136 Autophagy - other
125657346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125657346
03029 Mitochondrial biogenesis [BR:
oed03029
]
125657346
Membrane trafficking [BR:
oed04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
125657346
Others
Specific organelles associated proteins
Auto phagosome
125657346
Mitochondrial biogenesis [BR:
oed03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125657346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
ATG16
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
eIF2A
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Tricorn_2nd
Cnn_1N
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_ACSF4
Beta-prop_WDR41
Beta-prop_NWD2_C
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
125657346
NCBI-ProteinID:
XP_056004694
LinkDB
All DBs
Position
9:17911407..17934379
Genome browser
AA seq
551 aa
AA seq
DB search
MDPKDLHWKHSLLEQLRHRDQKEKVPFESLIASHWKHFEYSQSLKSKNVQLTVETEKLKE
ENFGLQIKVEQGGGGSGGNNQALEQKLFKLQEEVTELHRRRGENTQQIIDLNNLLQEKEK
ELHGRDDRLNDLLANELSLKMEIKNLESTIMELEATNQMLKDEHQALQLTYTGLEEKYRK
VEKDNQQLLERWIRQQAKMADQLNAENDQFMLIRQQKLRKELEDAARENVQILPERQSGV
YVPTTIPICLSASLPTKAQYKFDAHEGDVNAIRWSPSGSMFATGGADRKIKLWEVINGKC
ESKGILTGSNAGIMALDFDLEENSILGASNDFASRVWSLTDLRVRHTLTGHSGKVLAAKF
LGDSSKVVSGSHDRTLKIWDLHSRSCVKTIFAGSSCNDLVTIHGTNILSGHFDKRVRFWD
SRTDSSTNEILLQGRLTSLDLSPDKMNLLCCTRDDTIKVLDLRMNQVSTTLAHDDFKVGC
DWSRAVFSPDTSYAVAGSSDGAVFIWNIKRGRVEKILKEHAHSVIACSWHPVGSYVLSCE
KQRKTILWSDI
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaaggatcttcattggaaacactcattgttagaacaactccgacatcgggat
caaaaagagaaggtgccattcgaatctttgattgcttcacattggaagcactttgaatat
tcacagtcgcttaaatcaaagaatgttcaactcacagtggagacagaaaaacttaaggaa
gaaaattttggtttacaaatcaaagttgagcaaggtggagggggaagtggtgggaacaac
caggctcttgaacaaaaacttttcaaacttcaagaggaagtcacagagctccacagacga
agaggggagaatacacagcagataatagacctaaataatctattgcaagaaaaagaaaag
gagctgcatggaagggatgacagactgaatgatttgcttgcaaatgaattatccttgaag
atggaaataaagaatctagaaagtacgattatggaattagaagcaaccaatcagatgctg
aaggacgaacaccaggcactacagctgacctacacaggtttagaagagaaatacagaaaa
gtcgagaaggacaatcagcaactccttgaacgatggatccgacagcaggccaaaatggct
gaccaactcaatgccgagaatgaccagttcatgttaatacgacaacagaaattaagaaaa
gaactggaagatgcagctagagaaaatgttcaaatattaccagagaggcagtctggtgtg
tatgtcccaacaactattcctatctgtctgagtgcctctttacctaccaaagctcaatac
aaatttgacgcccatgagggtgatgtgaatgccatccggtggagcccctctgggtcaatg
tttgccacaggaggagcagatagaaagattaaactgtgggaagttatcaatgggaaatgc
gagagtaaaggaattctgacaggcagtaatgcaggtattatggctctggattttgatctg
gaggagaactcaatactaggtgcttctaatgattttgccagcagagtatggtctctcaca
gatctcagagtgaggcacactttgactggtcacagtggaaaagtccttgcagccaaattc
ctcggtgatagcagtaaagttgtctctgggagtcatgacagaactctgaagatttgggac
ttgcacagcagatcatgtgtgaaaacaatatttgctggttcaagttgtaatgatttagtg
actattcacggcacaaatattctcagtggacattttgacaagagagtaaggttctgggat
agccgaacagacagcagcaccaatgaaatcttgcttcagggaagactgacctccctagat
ctgtctccagataaaatgaatttgctgtgctgcacaagagatgataccataaaagtgtta
gacttgagaatgaaccaagtatctactacattagctcatgatgatttcaaagttggctgt
gattggtcaagagctgtgttcagtccagatacttcctatgctgtggcagggtccagtgat
ggtgcagtatttatctggaatatcaaaagaggcagggtggaaaaaatcctcaaagaacat
gcgcattctgtgatagcctgctcctggcatcctgtaggttcttatgtactgagctgtgag
aaacagcgtaaaacaatcctgtggtctgatatctga
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integrated database retrieval system
