Ostrea edulis (European flat oyster): 125657586
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Entry
125657586 CDS
T09123
Name
(RefSeq) RING finger protein 37-like
KO
K10600
U-box domain-containing protein 5 [EC:
2.3.2.27
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125657586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125657586
Enzymes [BR:
oed01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125657586
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
U-box type E3
125657586
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Gene cluster
GFIT
Motif
Pfam:
DUF5918
U-box
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
125657586
NCBI-ProteinID:
XP_048744214
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Position
9:37536000..37541608
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AA seq
566 aa
AA seq
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MLINFCDSRLYPKISCDKVTRDGHEVENLISNDWSQRQRGFLGEHFIRPPVTVTLSFPCN
IEIKCIVINPCVSAQRSSGLEIYSRSNQVTSRPGPLWEHVPQIPSKEKNAYEFIASAVFT
PIGKVQLSDPGIVYFENRLFQHKSANEKEQIPKSQCQHIIELRGRNLRALNFVSDLNIRV
TRTASGQSVAIKNIEVWGQPSKSVPKPLRDKIENLFCESALPNVVDTNIQRSISMTQTAD
RKSTAEICVQTSNELIHLENGMEVPEDFVDCITCEIMTVPMLLPCGKNIDQSTLERHNSV
EASWGRLPSDPFTGVTYNDQNKPLPNTPLKVRLDKFLLENSLQLQHIPKTLGRYSDNCSA
YQKNGPNLSRLVESHENISRCRADNIVNDQGESAMNEILQIRKRKKVCLHSDIKDKRNRK
TEPSIPGSDASENCHSDLNIIDLTKDDMTSVTMVTGKGQSVSLKTKSHEEELKESIDSAF
SAVLSQLPSFTKSERNVEDEAGPSSVVRHSQSHCSNCEGQCGSMYRAPCGHLFCRKCVLK
DTNRCSVVLDKMCQKSWKSSEICKVH
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgcttataaatttctgtgacagccgactttatcccaaaataagttgtgataaagtgacc
agggatggacatgaggtggagaatttgatttcgaatgactggtcacagagacagcggggt
tttctgggagaacacttcatcagaccccctgtgactgttaccctatcatttccttgtaac
attgagataaagtgtattgttataaatccctgtgtgagtgcccagaggtcatctggatta
gaaatctacagtaggagtaaccaggtgacatccagaccgggtccactctgggaacacgtt
cctcaaatcccatcaaaggaaaaaaatgcatatgaattcatagctagtgcagtgtttacc
cctattggaaaagtgcaactttcagacccaggaattgtatattttgaaaatcgattattt
cagcataaatctgcaaatgaaaaggagcaaattcctaagtcacagtgtcaacacatcatt
gaactacggggcagaaatttgagggcattaaattttgtaagtgaccttaatatccgggtt
acaagaacagcatcaggacaatctgttgcgattaaaaatatcgaagtctggggtcaacct
tcgaaatcagttccaaagccactcagagataaaatagaaaatctgttttgtgaaagtgct
ttacccaatgtagtggatacaaatatacaaagaagcatttctatgacccagactgcagac
agaaagtcaacagcagagatttgtgttcagacatcgaatgagctcatacatttagagaac
ggaatggaagtcccagaggattttgtcgattgtattacatgtgagattatgactgtacca
atgctgttaccatgtggtaaaaatattgaccaatccactttagagagacacaattcagta
gaggcatcatggggtcgactgcccagtgacccctttacaggagttacttataatgaccaa
aataagccattgccaaacacacctctgaaagttcgtctggataaatttttgcttgaaaat
agtctacagcttcagcatataccaaaaactctaggccgatactcagataattgttctgct
taccagaaaaatggacctaatttaagtaggctagttgaaagtcatgaaaacatttctagg
tgtagggcagacaatatcgtgaatgaccaaggtgagtctgccatgaatgaaatacttcag
attaggaagagaaagaaagtatgtttacattctgatatcaaggacaagcggaacagaaaa
acagagccatcgattcctggaagtgatgcatcagagaactgtcacagtgatttaaatatt
atagatcttacaaaagatgacatgacatcggttaccatggtaacaggaaagggtcagtct
gtgtcattaaagacaaaatctcatgaggaggaattaaaggagagcatcgactcggcattc
agtgctgttctgagccagttaccgtccttcacaaaatcagaacggaatgttgaagacgaa
gctgggccttcatcagtggttaggcattctcagagccactgttcaaactgtgaggggcag
tgtggctccatgtacagggccccatgtggccatctgttctgtaggaaatgtgtgctgaaa
gataccaacaggtgctccgtggtgttggataaaatgtgtcagaagtcttggaaatcaagt
gaaatctgtaaggttcattag
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