Ostrea edulis (European flat oyster): 125657887
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Entry
125657887 CDS
T09123
Name
(RefSeq) guanine nucleotide exchange factor DBS-like isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125657887
Membrane trafficking [BR:
oed04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125657887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
SH3_2
CRAL_TRIO_2
SH3_1
SH3_9
PH
Spectrin
CRAL_TRIO
SH3_3
Motif
Other DBs
NCBI-GeneID:
125657887
NCBI-ProteinID:
XP_048744725
LinkDB
All DBs
Position
9:complement(65386943..65437662)
Genome browser
AA seq
1267 aa
AA seq
DB search
MATGRRGVHTTKSNSPRSKKTGGIQVSKVEHDIDEFLENFRRKSSTLDLPAGTDMRETLG
LPPAGYSSSQCSTDECTDESPDRSYFLPPSTFVKGHRHQYSNTTSESEWGPDCDEEISKE
DRIKELNAQTQNAEEQKVTEKDSDLMEEQECPYSVLDVASLIQSRYAFITGGKAKNGALI
LTFPENPQHPQIPDEEYRKLVNFLCCVPTVVESEQGFVIILDRRQASWNDVRALLLKMSE
FFPNHIQVVFLLQPKGFFQRAFADMKSKFVKEELEFKVVLCNEPSEMLDYISEDQITTDV
GGKLEFDANEWTQHKSAVEKFASNTEKMSAAVKILVKKYDEIEIPNDVPGMEKLIQDHVQ
GRKEILDDITSTVTHGETLLSCIRGDNSDVHFTQATHVRSLDKLLIKLEEIKKEFEGFWD
KHEKRLNQTLLLREFEEEFKLYQFGVERKLEWLLNKMSEIGDSLTKVEELFQEFEEFEQQ
AQKDLEQADRMRGNGDQLIAQDSYAVDSIRPKCIELQRMCDQYKSLLRRRREMLNKSHDL
QDRIDKANKWCNKGVELLSNLPPEHCQSAEDTRSAIEDIENFMTTSSQLRLNNPKEFRQL
FESMITPDTRTVVQKVLRKMEDVSAMCERRRHSFQETIHNRQSSHTGPHNQPSSHTGTHN
RQSSHTRPIRAIHPMDRSTTDGPEPKPKVSNETANKQIDMYHKSARLRTDMTSHLRMSHQ
TANSVSNISDTGSEKTRSSLSSMSTTTSLGSSISDIDTLLAKRRHVLNELIESEKTYVSQ
LADIVHGYQDKLEDSEMRHLVPDAIRGKKEILFGNLEQIYRFHKDKFLHELEDCHDAPAK
VGQCFTNRKEEFHLYSVYCQNKTRSETLRNQVGDQNPFFLECQRRLGHKLPLGAFLLKPV
QRITKYQLLLKEMLRFSDHDKDCEAHLQEALDCMLEVVRYVNDSMHQISIVGFPGNLSEQ
GKLIMQGSFQMSTEHKGKIKDLRFKPMQRQMFLHQKSILLCKRREDTNSCDKVVYSFKNL
LKLSQVGLTENVKGDKRKFELWLRGREEVYIIQAPSLAVKEMWVKEIKRVLMNQFDEIKA
VNHMHNTSNNYRVPDQEPRNGHSSRRYVDNWRTHNHMIFNNNTPTVPQGLEMMSPESPPR
GTREDDVGWDTDEFSDGEEAISRHPYSPPVHKQPVYMQHFRSLGNYTASDPTEMTLLEGD
VVKVIKTGSTGWWYAQHTVTQQEGWVPSTYMEALTDNSLSSINSSPHDYKSSLTSVYTAS
PVDESTV
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaggaagaaggggtgtacataccaccaaatcaaactcgcccagatcgaagaaa
acaggaggaatccaggtatcaaaagtggaacatgatattgacgaattcctggagaacttc
cgacggaagagttctaccttggatctgccagcaggtacggatatgcgcgagaccctcggg
ctcccccctgcaggttatagctcatctcagtgctccactgacgagtgcacggacgagagt
ccggacagatcttattttctgcccccttcgacatttgtgaaaggtcatcgccaccagtat
agcaacacgacgagcgagtctgagtgggggccggactgtgatgaggaaatctcaaaagag
gataggattaaagaactcaacgctcaaactcagaacgctgaggagcagaaggtgacagag
aaagatagcgacttaatggaagagcaagaatgtccatacagtgtcctggatgtggcttct
ctgatacaatcacgatacgcatttatcacaggtggaaaagcaaagaatggcgccttgatc
ctcacatttccagaaaacccccaacacccacaaatacccgacgaagagtaccgaaagctc
gtcaacttcctgtgttgtgtaccaacggtggtggaatctgaacaggggtttgtgattata
ttagacagaagacaggcaagctggaatgatgtcagggcactcttactcaaaatgtcggag
tttttcccaaaccatatacaagttgtattcctacttcaaccaaagggattcttccaaaga
gcttttgctgatatgaaatccaagtttgtgaaagaagaattagaattcaaggttgtgttg
tgtaatgagcccagcgagatgttggattacatcagtgaggaccagattacaacagatgtc
ggaggcaaacttgaatttgacgctaacgagtggactcaacataagtctgcagtagaaaaa
tttgcatccaacacagaaaagatgtctgccgctgtaaagatcctggtgaagaaatatgat
gagatagagattccgaacgacgtcccggggatggagaaactcatccaagaccacgtccag
ggccgcaaggagatcctcgatgacattacgtccacggtaacccacggagagacattgctg
agctgtattaggggagataactcagatgttcactttacacaggccacacatgtcagaagt
ctagataaacttttgatcaaacttgaagaaattaagaaagagtttgagggattctgggat
aaacatgagaagcgattgaatcaaacacttcttctaagagagttcgaggaagaattcaaa
ctatatcagttcggagtggaacgtaaattagaatggttgttgaataaaatgtccgagatt
ggagattctttgaccaaagtggaggaactgttccaggaatttgaggagtttgaacagcaa
gcacagaaagacctagagcaggcagacagaatgcgggggaacggggaccagctaatcgcc
caggacagctatgcagtcgattccatccgaccaaaatgcattgagctccagcgaatgtgt
gaccagtacaaatccctgctgaggcgacgcagggaaatgctcaacaaatcacatgatctc
caggatagaatcgacaaggcaaacaagtggtgcaacaagggtgtggaactgttgtccaat
ctcccaccggagcattgtcagtctgcggaggacacccggtcagccatcgaagacatcgag
aacttcatgaccacatccagtcagctccgactgaacaatccgaaggaattccgacaactg
tttgaaagcatgatcactccagataccaggacggtggtgcagaaggtgttgaggaaaatg
gaggacgtaagtgccatgtgtgaaaggagacgtcacagtttccaggaaaccatccataac
cgacagtcttctcacaccgggccacataaccaaccgtcctctcacaccgggacacataac
cgacagtcctctcacaccaggccgattcgagccatccaccctatggataggagtaccacc
gatgggccagaacccaaacccaaggtctccaatgaaactgccaacaaacagatagacatg
taccacaagtcagcccgattacggacagacatgacgtctcacctccgaatgtctcatcaa
actgctaatagcgtcagtaatatctccgacacaggaagtgaaaaaactcgaagttccttg
tcttcaatgtccacgaccacgtcactggggtcgtcaatatccgacattgacacgttactc
gctaaacgcagacatgttttaaatgaactgatcgagtcagagaagacttatgtctcacaa
ttagcagatattgttcatggttaccaagataaactagaagactccgagatgagacatttg
gttcctgatgcaattcgagggaagaaggagatcctttttgggaatttagaacaaatctac
agattccataaagataaattcctccatgaattagaagactgccacgatgccccggccaag
gtgggccagtgttttaccaacaggaaagaagaattccatttatacagtgtttactgtcaa
aacaaaactagatccgagactctcaggaaccaagtcggagaccaaaacccgttcttcctg
gaatgtcagagaagacttggacacaaacttccgttaggagcttttcttctgaaaccagtc
caaagaattaccaaataccagttgttactaaaggagatgttacggttcagtgatcatgat
aaggactgtgaagcccacttacaggaggctttggattgtatgctggaggtggtccgctac
gtcaatgacagcatgcatcagatctccattgtgggattccccggcaacctgtctgagcag
gggaaactaatcatgcagggcagttttcagatgtcgacagaacacaagggtaaaataaag
gacctgagatttaaacctatgcagcgacagatgtttcttcatcagaagtccattctcttg
tgtaaacgcagggaagacacaaacagctgtgacaaggtcgtctacagcttcaaaaatctc
ctcaagttgtcccaggttggattgacggaaaatgtcaagggagataagcggaagtttgag
ctctggcttcgggggagagaagaggtgtacatcattcaagcacccagtttggctgtcaag
gagatgtgggtcaaagaaatcaaaagagttttaatgaaccagtttgatgaaatcaaagca
gtgaatcacatgcataatacgagtaataattaccgggtccccgaccaggagccgagaaac
ggacacagttctcgcagatatgttgataactggagaactcacaaccacatgatatttaac
aacaatactcccaccgtcccccagggactggagatgatgtcaccggagtccccaccccga
gggacacgagaggatgatgtaggctgggatacagatgagttttctgatggggaggaggca
atttctcgtcatccctactccccacctgtccacaaacagcccgtctacatgcagcatttc
cgttcccttggtaactacacagccagtgaccccactgaaatgactttgttggagggtgat
gtggtgaaggtcattaagacggggtccacagggtggtggtacgcccagcatacagtcact
cagcaggagggctgggtgccttctacctacatggaggcactaactgacaactccctatcc
agtatcaattccagtccacatgactataaatccagcttaacaagtgtgtatactgctagt
ccggttgacgagtcaacagtgtaa
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integrated database retrieval system
