Ostrea edulis (European flat oyster): 125657896
Help
Entry
125657896 CDS
T09123
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12-like protein isoform X1
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125657896
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
125657896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12
KDM5_C-hel
Motif
Other DBs
NCBI-GeneID:
125657896
NCBI-ProteinID:
XP_048744763
LinkDB
All DBs
Position
9:complement(46581721..46678206)
Genome browser
AA seq
2074 aa
AA seq
DB search
MSVFPSQESRPLKKPRLGPPDVYPQDSKQKEDELTAISVKLGFSNNPPSGWDEYGSARRE
NINQEKFGKDFISVLNRKTEYNTFQDTTKKKQMPTKDIFWPAAKNQSAMRAWFKDLSGNK
PLSHLGRKVPTFNKKEEVFSTLCEFVVPMTKAVWFIKMTAAYNVAVQEKMKQRRQMVDQS
MEWCQAITKYLRDQIQKIQEPHSGPGSTAGFLTVSQPDPNQALRQWQYTCKLARHMYDEG
LVDRHEFLSWLIDLVEKMKQNEDTVFKLLMAQILLYMEEITLSVILSRRLAHFSAKKIAQ
LCSESDCMPPRTDSPMLTTGSTGMPNNQIMTQNPLATVFAQHNNCPQHRGIVLSVCATLQ
IITLLCPSALVWNSLGDGKNSSFLCGSPLDILPCAPSSLPMPQGPQNMQIRTQIRSSENH
VRQRGRAAELRWSSDKCQQSTKGNTITRVLEVLDTLDRHNFDKEDTLNSLETLYHKIFTA
NQTKDNSEEDEVLPKPFISDEPIIHLLIDWAVSIRRSGIYRAVVVAKLLEKRQVDIRTEK
FSENQSMDDRESVGSDSLVPSGTPYFQAILMAYLDDQAPSLDDNPNDNDRQGFANLIQLF
SELIRHDVFSHDAYMCFLISRGDLLSSPSVMTVTTDCIDLSSIKSQVESVKHEPQDDFKV
DIMDMHTVELSDFGSLFGTGKDEQRTSPEEPASVKSVMSEKEPHHAIPTLPNSDQQQKGP
SRHMLYAQHFPIPDDDSIHECNQRIAVLYGVGKARDDAKHVVKKISKEVLKMFSKKNCVD
ISSGELGRVKKRKEKEAIDSMSNVSTNFENVFEGIFNKFQKLSYHDQHAVTAQCKNLVLE
EIRNFTACSSFYLPLVENVSYLFDLMEYSLNIHGLLDFSVQLLKELSNVEETLIEQKSSL
VGNYTTSLCLCIVGVFRKYHAYLLVSRDLTITAFEWLISVVRKIYNPSDCSSSERCILAY
LYDAYSSCSYLREKFCDMFSNPYRKMKMTLYATITPSASNKLWDPGFMVNFMNQTNIKIP
LDDMVINDLRENPAHRYSFVCNAMLYICNTQETDRLNEISILCAELTARCNALSPEWLGV
LQALCFSCANSCGFIDILTQIDVSDMSIHDSLAVFTAILIARHCFSLQDLVVHVVLPSLL
SARPTASGDQDAENGARLTCHILLRLFKTSDMTLTSPGPRLGSKSQSQCNIKRSCDKHLL
AAAHDSITVGPVLAVLKAMLVLSDLCSDEMRCKSGSSSKKEDKDDIFRTLLSSIDDEEDM
HMAMGPSKRKHGMESAGLSDFARHALKEMCKQEWVQEKFLKDPEGVQSSDLLLDNMLSNK
QAQQLLQMICYPNGVPNQVDGSEPDVKQIIQRVLQTLDMWGLRVSLLELQLLFKQATTQA
DTNILLDSIARGTIDLFHRQTESNRHTDIDSNQQKPDPDAIWLVGPLIAKLPSQVQGRVL
KLSGHVLESGNNFQSKGRDKERSQRSKSLLSHQPFLCLILTCLKGQDEQREVLLNSLLSQ
LDRFINNCKEALDKTPDEFKVRANIHEALLLKLSLVGGMFDTIQRSMTNTTDWAQLLLQL
VTSGIVDIQSNSELFTVLLDMLSVLIHGTLITEGSDKGEDINKMYTNLIKKLRKELGDKQ
SDSIDKIRQLLPIPKRFFEVISCEAHGTQMDSKGNKYDGFGKKEGFQVAKKEKISPWEVI
EGYKNPPPLSWHFFGALKLEKKPLRYEEQHRLLLFHTHSLRQPLAHFLDPPSLPPEDLEP
VPEKIEEKPKEANENPQQDMSRKKKPKKKTNRTNSGSGQGPYNIQPPVRQYQPSTNWYPT
QTQQHPQFYGNQPMPAGPRFEAPPYSMQGMTPSKMAIQQMIRTRHPGNMHQWANTNQPSM
QTLQLLQKQQSHRMVRQQIRQTFQNHNRGVTPDGSQAMFSGGMHSMNQNQVGMTQNYAPS
YNIPQQSTSMDPGMMSQGTYNQSYNGGQATGMMPQAGFIPQQQPTQQHFSQPSSRMMVPS
QMQTPQSTMGTGNASYNQMGPSAIPQSTYLQNMPSNPQQLQQLRQQQQQQRLMAMKRQSM
SNPGQQPQSAALMAQIQQQIGPNQYGNYNNQQRF
NT seq
6225 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtatttccatcacaagaaagtaggcctctaaagaagcccagactagggcctcct
gatgtctatcctcaggattcaaagcaaaaagaggatgagctaactgcaataagtgtgaaa
cttggattcagcaacaatcccccaagtggatgggatgagtatggctcagcaagaagagaa
aacatcaaccaagaaaagtttggcaaagattttatatctgtgctcaacagaaagactgaa
tataacaccttccaagacactacaaagaaaaagcaaatgcccacaaaagatatattttgg
ccggcggcaaaaaatcaaagtgccatgcgagcctggttcaaagatctttctggaaacaaa
ccactgtcacatctaggaaggaaggtgcccacatttaacaagaaggaggaagtgttcagt
actctgtgtgagtttgtggtgcccatgacgaaggctgtctggtttatcaagatgactgca
gcgtacaatgtggccgttcaggagaagatgaaacagcgcagacaaatggtggaccagtcc
atggaatggtgtcaggccatcactaaatacctgagggaccagattcaaaaaatccaggag
ccacacagtggccccggttccactgctggattcctcactgtatcacagcctgatcctaac
caggccctgaggcaatggcagtacacctgtaaattagccaggcatatgtatgatgaggga
ctggtggacagacatgaatttttgagttggctaatcgatttagtggagaaaatgaaacag
aatgaagatactgttttcaaacttctgatggcacaaattctgctgtacatggaggagata
acgctatcagtgatattatccagaagactggcccatttctcggccaagaagatagcccag
ctgtgtagcgagtccgactgcatgccccctcgcaccgactcacccatgctgaccactggc
tctactggtatgccgaataaccagatcatgacccagaatcccctagctactgtgtttgct
cagcataacaactgtccccagcatcgggggattgtgctcagtgtgtgtgccaccctccag
atcatcaccctgctgtgcccctccgccctggtctggaatagcctgggggatgggaagaac
tcctccttcctctgtggctcaccactggatattcttccctgtgccccatccagtttacca
atgcctcagggtcctcagaacatgcagatcagaacacagattcgttcatcagagaaccat
gttagacaaaggggtagagcagcagagctccgatggtcctccgacaaatgccaacagtcc
actaaagggaacaccataactcgagtgttggaggtgttggacacgctggacaggcataat
tttgacaaagaggacactctaaattccctggaaactttgtatcacaagatcttcacagcc
aatcagaccaaagacaactcagaggaggatgaagtattaccaaaacccttcatcagtgat
gaaccaatcatacaccttcttattgactgggcagtcagcatcagaagaagtgggatatac
agggcagtagttgtggccaaactattggagaaaagacaggtggatatcaggactgagaaa
ttcagcgagaaccaatcaatggatgatagggagtcggtaggctccgattcgcttgttccg
tcaggaacaccgtactttcaggctattttgatggcttatctggatgatcaagctccttct
ctggatgacaaccccaatgacaatgatcgccaagggttcgccaatctcattcagctgttt
agtgaattgatccgccatgatgtgttttcccatgatgcttacatgtgtttcctgatttcc
cgtggtgacctactgtcgtcaccttccgtgatgacagtgaccaccgactgcatcgacctc
tccagtatcaagagtcaggttgaaagtgttaaacatgagcctcaggatgactttaaggta
gatatcatggatatgcatactgtagagttgagtgattttggaagtttgtttgggactgga
aaagatgaacagagaaccagtccagaagaaccagcttctgtgaaatcagtgatgtcagaa
aaagagccccaccatgccatccccactcttcctaactcagaccagcaacagaagggaccc
tctcgacacatgctgtacgcccaacatttcccgattcccgacgatgattcgatccacgag
tgtaatcaacgtattgcggttctgtatggtgtaggcaaagccagggatgatgcaaaacac
gtcgtgaagaagatcagtaaggaggtccttaagatgtttagcaagaaaaactgtgtggat
ataagcagtggagaactgggtcgcgtgaagaaacgcaaagaaaaggaggccattgattcc
atgtccaacgtcagtacaaactttgagaatgtctttgagggaatttttaacaaattccag
aagttgtcgtatcacgaccaacatgctgtcacagcacagtgtaagaatctcgtgttggag
gagatacggaattttacagcatgcagttccttttacctcccccttgtagaaaatgtgtcc
tatttgtttgacttgatggaatactccctcaacatccatggtctgctggacttctctgta
cagttgctgaaggagctgagtaacgtagaggagacgctgatcgaacagaagtccagtcta
gtgggtaactacactacgtccctgtgtctgtgtattgtgggcgtgtttagaaagtaccat
gcctaccttctagtgtcacgagaccttactattacggcctttgagtggctgatcagtgtg
gtcaggaagatttacaatccatcagactgttcctcctcggagcggtgtatcctggcctac
ctatacgatgcctacagctcctgcagttacctaagggagaagttttgtgacatgttcagc
aacccctacaggaaaatgaagatgactctgtatgccacaatcacaccttcagcatccaat
aaactctgggatccaggcttcatggtcaacttcatgaaccagaccaacatcaagattccg
ctggatgacatggtgataaatgacctgagagagaacccagcccaccgatacagctttgtc
tgtaacgccatgctgtacatctgtaacactcaggaaaccgacagactgaacgagatctcc
attttatgtgcggagttgacggcacggtgtaatgcgttgagtccagagtggctgggtgtg
ttacaggctctctgtttttcatgtgccaacagctgtggttttattgacatcctcacgcag
attgacgtgagtgatatgtcaatccatgactctcttgctgtgttcactgccatcctaatt
gctcgccattgtttctcattacaagatcttgttgttcatgttgtattaccatccttactg
tctgctagaccaacagcatctggtgaccaggatgctgagaatggagctagactgacttgt
cacatcctgctgcggttatttaagacatcggatatgaccttgacctcacctggtcccaga
ctgggcagtaagtcccaatctcagtgtaacataaagaggtcctgtgacaagcacctgttg
gcagccgcccatgacagtatcacagtaggccctgtactggcagtcctcaaggctatgctg
gtcctgagtgacctctgcagtgatgagatgagatgtaagtcggggtccagcagtaagaag
gaggacaaagatgatatattccgtacactgctcagtagtattgatgatgaggaggacatg
cacatggcaatgggaccctctaagaggaagcatggtatggagagtgctggtctgagtgac
tttgcccgtcacgccctgaaggaaatgtgtaaacaggaatgggtacaggaaaaatttctc
aaggacccagagggcgtacagagctctgatctcttactggacaacatgctgtccaacaag
caggctcagcagctgctccaaatgatctgttaccccaacggggttcctaaccaagtggat
gggagtgaaccagatgtgaaacagatcattcaacgtgttttacagactctagacatgtgg
gggctacgtgtgtcattgctcgagttacagctcctcttcaaacaggccaccacacaagca
gacaccaatatactgctggacagcattgctagaggaacgattgatctgttccatcgacag
accgagtcaaaccgacacactgatatagactcaaatcaacaaaaacctgatcctgatgca
atttggctggtgggccccctgatcgcgaagctcccaagtcaggtccagggacgagtattg
aagctgtctgggcatgtgctggagagtggaaacaacttccaatcgaaaggtcgcgacaag
gagaggagtcaaagaagcaagtccctccttagtcaccaaccattcctgtgtctgattcta
acctgtctgaagggccaggatgagcagagagaggtcctgttaaactcactactgtctcag
ctggatcggttcatcaataactgtaaagaagctctggataaaacaccagatgaattcaaa
gttcgagcaaacattcacgaagccctgttgctgaaattgtctctggttggtgggatgttt
gacacgatacagaggagcatgaccaacaccacagactgggctcaacttctcctgcagctg
gtcactagtggcatcgtggacattcagtctaatagtgagttgttcacagtgctactggac
atgttgtcagttctgatacatgggacactgataacagaggggtctgataaaggagaagat
attaacaaaatgtataccaacctcattaagaaactacggaaagaactgggcgacaagcag
tccgactctatagataagatacgccagttacttcccataccaaagcggttcttcgaagtg
atcagctgtgaagcccacggtacacagatggacagcaaaggcaacaaatacgatggattc
ggcaaaaaagagggtttccaagtagcaaagaaggagaagattagcccctgggaggtgata
gagggctacaagaatcccccacccttgtcatggcatttctttggggcattaaaactggag
aaaaagcctctcagatatgaggagcagcacaggttgctgttatttcacacgcactccctc
cgtcagcccctcgctcatttcctggacccaccttctctacccccagaggacctcgaacca
gtgcctgagaaaattgaggagaaacccaaagaggccaatgagaatccacaacaggatatg
agcaggaaaaagaaacccaaaaagaaaacgaaccgaaccaacagtggcagcggtcagggc
ccatacaatatccagcctcctgttcgccagtatcagccctcaacaaactggtatcccacg
cagacgcagcaacacccacagttctatggcaaccagcccatgccagcaggtccaaggttt
gaggcccctccttacagcatgcagggtatgactccctcaaaaatggccattcagcaaatg
atcagaactcgtcaccctggcaacatgcatcagtgggcaaacactaatcaaccctccatg
cagaccttgcagcttttgcagaaacaacagagccaccgcatggtcaggcaacagatcagg
caaacctttcaaaaccataaccgtggtgttacacctgatggtagtcaggcgatgttctca
ggcggcatgcattcaatgaatcagaatcaggttgggatgactcagaactatgctccatct
tacaacattccacaacagtccactagtatggacccaggaatgatgtcccaggggacttat
aaccagtcctacaacgggggacaagcgacaggcatgatgccccaggcagggtttatacct
caacagcaaccaacacagcaacacttcagtcagccatcctctcgaatgatggttccaagt
cagatgcagacgccacaaagtacaatggggaccgggaacgctagttacaatcagatgggg
ccatcagccattcctcagagcacttacttgcagaacatgccatcaaacccccaacaactg
caacagctaagacaacaacaacaacaacagagacttatggccatgaaaagacagtccatg
agcaaccctggtcagcagccacaaagtgctgctctcatggctcaaattcagcaacaaatt
ggaccgaatcagtacgggaactataataatcagcaacgattttaa
DBGET
integrated database retrieval system
