Ostrea edulis (European flat oyster): 125657966
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Entry
125657966 CDS
T09123
Name
(RefSeq) DNA polymerase nu-like
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125657966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oed03400
]
125657966
Enzymes [BR:
oed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125657966
DNA repair and recombination proteins [BR:
oed03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
125657966
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
T7-like_gp12
Motif
Other DBs
NCBI-GeneID:
125657966
NCBI-ProteinID:
XP_056004720
LinkDB
All DBs
Position
9:complement(18594458..18629464)
Genome browser
AA seq
1046 aa
AA seq
DB search
MSRPRQITWKPSIAAPVLKKNSCLSEDAQRVLGAIQREQSKGPCDQRLRDVSSYYRHIYE
KKFSMVSSTNHNPFKIKMENEYSLCEGQDFYGRSSANKVDRGLLNKHGENEQIDFSGISF
DFRSRFFQNGGNGISKSRYQIPLPREMNDSSGTSLYTECSFTLPLDYQKQSSVNLQGKPR
KGDLYQSKKYCDFISNKKNLAILEAVDINHMGNIDSSGGPYKETRTKVSSLPPTIQQYKC
EQPKNSSIKNSNVLNQLANSVPIMGEPEQHVHSQVLFSQDEIISDIDLDFPKVSKPVEDF
KNKHSKENIPAEVERTPCATVSRKNSTISSNIARRLYEHKRKRQENGAPGTECNGEVKQT
KKILTHYSVPYKRKKDDEQSDCGSKAKSASSYHDITEMSVIERRQMLDKILQSKEIAITL
LYSDGSTQLREHTDDSSSKKKSGTLKMKPISQVSGLYMKSTGDQDHNFLYIPLQISDTVV
HKQINDFLKEFLNSRSRQVCYCAKDFLIVVLKYLEKIEKCPMNDFLASTVWDPVVAEWLS
NPDKATSNFQQMLIDNGIQQKKQSIDHLGDNSLSEDLDMLLELMQKQFQNLRSKNLEQLF
LGIETKLMPILAAMDTRKIKVHTKTMLKFSEILKIKMNSLEQKAHDIVGHTFAISSPAQI
RQVLFEELKLHTKLLTDTKLAKTAVGHQWSTSESVLSQLAGVHPLPSVILEYRQVGEKVI
QKLKSTYIDGMMNAVVDGYLSSHWDQTSAATGRLSSHTPNIQAIPKSSSLISITDTAKHC
IIGKETEEKNVEIFARDSFVSHDGWSFLSADFQQIELRLLAHLSNDSTLLRLFKEHSDKD
IFIELTAQWLRKSSADVTSAEREQTKRIVYSVMYGAGKEKLAEYLKITPMDAKSIIDSFL
VSFPIVNHFSRKCIEFCRQKGYTESIFKRRRLIPNINHPYAPLRAKAERKAVNFCVQGSA
ADLCKAAMLQVEHTLLQHSDLKVRLLVQIHDELIFEVPDEHISSAGALIKSVMEDSGKLC
GHFTQLRIPIKVSLCAGKTWGHMSPL
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggcctagacaaataacctggaaaccaagtattgctgcaccagttctgaagaaa
aattcctgcctgtcggaagatgcacagcgtgtccttggagcaattcaaagagagcagagc
aagggtccttgtgatcagagactcagggatgtatcaagttattatagacatatttatgaa
aagaaattcagcatggtttcatcaacaaatcataacccctttaaaattaaaatggaaaat
gaatattctctgtgtgaagggcaggatttctatggtaggagtagtgcaaataaggtggac
agaggccttttgaataaacatggagaaaatgaacagattgatttttctggtatcagtttt
gactttcgatctcggttcttccaaaatggagggaatgggatatcaaaaagtcgatatcag
ataccacttcctcgtgagatgaatgattcctctggtacaagtctgtacacagaatgcagt
tttacactacctctggattatcaaaagcaaagttctgtaaacctacaaggcaaaccacgg
aaaggtgatctgtaccaaagtaagaaatattgtgattttatctctaataaaaaaaacctg
gcgatattggaagcagtggacattaatcacatgggtaacatagatagtagtggtggacct
tataaagaaacaagaacaaaagtcagcagtctccctcctaccatacagcaatataaatgt
gaacaaccaaagaatagctctattaagaacagcaatgttctaaatcagctggctaacagt
gtaccaataatgggagaacctgaacaacatgtgcactcacaggtcctcttttctcaagat
gaaattatcagtgacatagacttggattttccaaaagtttcaaaaccagtagaggatttc
aaaaacaaacactctaaagagaatattccagctgaggttgaaaggactccttgtgctaca
gtctcaaggaaaaacagcactatcagttcaaatattgcaaggagattatatgagcataag
agaaagaggcaagaaaatggagcacctggaactgaatgcaacggggaagtaaagcagaca
aagaaaatactgactcattactctgtgccttacaaaagaaagaaagatgatgaacaaagt
gattgtggatcaaaagcaaaatcagcttcaagctatcatgatataacagagatgtcagtg
attgaaaggagacagatgctggataagattctacaaagtaaagaaatagccattactctt
ctttactcagatggctccacacagctgagggaacatactgatgatagcagttctaagaag
aaaagcggtactctaaagatgaagcccatatctcaggtttctggattgtacatgaaaagt
acaggggaccaggatcacaattttctgtacatacctctacaaataagtgatacagtagtt
cacaagcagatcaatgattttttaaaagaattcctcaacagtagaagcagacaagtatgc
tattgtgcaaaagactttctcattgttgtgttgaaatacctggagaaaattgagaagtgt
cccatgaatgattttctggcatcaacggtgtgggatccggttgttgctgagtggttatca
aatccagataaagcaacctccaacttccagcaaatgctcatagacaatggaatacaacag
aagaaacagtccattgatcatcttggagacaactctttatctgaagatttggacatgctg
ctagaactgatgcaaaagcaattccaaaacctacgctccaaaaatctagaacagttattt
cttggtatagagactaaattgatgcccattttagctgccatggatacaagaaaaataaaa
gttcatacaaaaacaatgctgaagttctcagaaattttaaagataaagatgaattcctta
gagcagaaagcacatgacattgtgggacacacctttgccatttccagtccagctcagatt
cgacaggttctttttgaagaactgaagcttcatacaaaattactgacagacacaaagctt
gccaaaacagcagtagggcatcagtggtcaacctcagaatccgtgctgtcacagttagca
ggtgtacatcccctcccatctgtcatactagagtaccgacaggtgggtgaaaaagtcatt
cagaaattgaaatccacgtacatagatgggatgatgaatgcagtggtggatgggtacctg
tcgtcacattgggaccagacctctgctgccactggtcgactatcctctcacacccccaat
attcaggctatcccgaaatcctccagtttgatctccatcactgatacagccaaacattgc
atcattggtaaggaaactgaagagaagaatgtggagatatttgccagggattcctttgta
agccatgatggatggtcttttctctctgcagattttcagcagatagaactgagactacta
gctcatttatcaaatgattcaactctattaagactgttcaaagaacatagtgacaaagac
atattcatagaactcacagctcaatggctgaggaaatcatcagctgatgtcacctctgca
gaaagagaacagacaaagaggatagtttattctgtcatgtatggtgcaggaaaagaaaaa
ttggcagagtacttgaagatcactcctatggatgctaaaagtatcatagatagcttcttg
gtttctttccctattgtaaatcatttctccaggaaatgtatagaattttgcagacaaaaa
ggttacacagagtctattttcaaaaggaggagattgatccccaacataaatcacccctat
gctccacttcgagcaaaagccgagaggaaagctgttaatttctgtgttcaagggtctgct
gctgatttgtgcaaagctgctatgcttcaagtagaacacacactacttcaacattcagat
ctaaaagtaagacttctggttcaaatccatgatgaattgatatttgaagtaccagatgag
catatctcaagtgctggggctttgataaagtcagtgatggaggacagcgggaaactttgt
ggtcactttacacagctcagaattccaatcaaagtgtcactgtgtgctgggaaaacctgg
ggtcatatgtctcctctataa
DBGET
integrated database retrieval system
