Ostrea edulis (European flat oyster): 125658304
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Entry
125658304 CDS
T09123
Name
(RefSeq) transcription initiation factor TFIID subunit 9B-like
KO
K14535
transcription initiation factor TFIID subunit 9
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125658304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125658304
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125658304
Coactivators
SAGA/TFTC/STAGA complex
125658304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID-31kDa
CENP-S
Bromo_TP
Histone
CBFD_NFYB_HMF
CENP-T_C
TAF10
TFIID_20kDa
TFIID-18kDa
Motif
Other DBs
NCBI-GeneID:
125658304
NCBI-ProteinID:
XP_048745485
LinkDB
All DBs
Position
9:complement(34770774..34780807)
Genome browser
AA seq
268 aa
AA seq
DB search
MASPAKSSPRDAQVMAAILKEMGVTEYEPRVVNVMLEFVYRYVTDVLEDAKVYSNHANKK
SLDAEDIKLAVQCRMDHSYTSPPPRDLLMEISKHKNSQVLPLIKPYTGLRLPPDRYCLSA
PNYKMTTHKAVKKHQARIQIGIPQFQQRINLSQMSMTPGKLGAGGPHLTVVTKPGMTVPA
VTIVTKPSGHHPTMTKPAIRISTGPALNSLNQVRTFQHSIPVPSSHQSAPQSSIQFQPLQ
STTMSLIAGQSLNPLKRKMQDDDYDNPS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcctgcaaaaagttctccgcgagatgcacaagttatggcagcaattctaaaa
gaaatgggcgttacagaatatgaaccaagagttgtaaatgtcatgttggagttcgtatac
cgttatgtaactgatgtcttggaagatgctaaagtctattctaatcatgctaacaagaag
tcattggatgcagaggacatcaaactggctgtacagtgccgtatggaccactcctacaca
agtccaccgcccagagacctcctaatggagatctccaagcacaaaaatagccaggttctt
ccactgattaaaccgtacacaggtctgcgtctgcccccagacaggtactgtttgtctgcc
cctaactacaaaatgaccactcacaaggcagtcaaaaagcaccaggctaggatacagatt
ggaataccacagttccagcagagaatcaacctgagtcagatgtcaatgacacctggtaaa
ctcggtgctggaggtccacatctcactgtggtcactaaaccaggcatgactgttcctgct
gttaccatagtaaccaagccctctggccatcaccctacaatgaccaaaccagccatccga
atctccacaggcccggccttaaactccttaaaccaggtgcgtacatttcaacacagcatc
ccggtgcctagtagccatcagtctgcccctcagtcttctatacaattccagccattacag
agcaccacgatgtccctcattgccggtcaatcattaaacccactgaagcggaaaatgcag
gatgatgactacgataatccgtcctga
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integrated database retrieval system
